Gene
| Gene Model ID | pfu_aug2.0_2205.1_18730 |
|---|---|
| Locus | scaffold2205.1 : 90302 ... 105755 : - |
| To GenomeBrowser | scaffold2205.1:90302..105755 |
| Genes list of scaffold | scaffold2205.1 |
| Synonym | pfu_aug1.0_8859.1_02662 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2205.1_18730.t1 | 4 | 1 | Helitron_like_N | 229 | 257 | 3.7e-30 | 105.0 | 1.1 | 8200.0 | -3.7 |
| pfu_aug2.0_2205.1_18730.t1 | 4 | 2 | Helitron_like_N | 526 | 561 | 3.7e-30 | 105.0 | 5.5e-06 | 0.041 | 13.6 |
| pfu_aug2.0_2205.1_18730.t1 | 4 | 3 | Helitron_like_N | 590 | 715 | 3.7e-30 | 105.0 | 3.0e-28 | 2.2e-24 | 86.1 |
| pfu_aug2.0_2205.1_18730.t1 | 4 | 4 | Helitron_like_N | 1081 | 1130 | 3.7e-30 | 105.0 | 0.018 | 140.0 | 2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2205.1_18730.t1 | gi|34365518|tpg|DAA01285.1| | TPA_exp: replicase/helicase/endonuclease [Danio rerio] | 0.0 |
| pfu_aug2.0_2205.1_18730.t1 | gi|688588405|ref|XP_009290034.1| | PREDICTED: uncharacterized protein LOC101886064 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2205.1_18730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2205.1_18730.t1 atgccgaaatcaaagaactggaggaggtcagcagtgaagagagggaacgctcatgccacaagagagacaattgacaagac cgaggatcctggcctcattaaaaacaggactgacgaccttgaggatcctgtcctcgttaaaaacagagaaaatgaattat ctacaaagcgaaagcaaagggaagatgaaaaatacagagaaaatgaattatctgcaaagagaaagcaaagggaagatgaa aaatatagagaaaatgaattatctgcaaagagaaagaaaagggaagatgaaaattatagagaaaatgaacgaaggaaaga attatctgcaaagagaaagcaaagagaagatgaaaaatatagacaaaatgaacgaaacaaagaattatctacaaagagaa agaacagaaagaacgatgactataaaaataaggaattatttgcaaagagaaagaaaagagaagatgagcaatacagaaaa aatgaacaaaagaaagaagggtctttaaagaaacgtgctagagcaaacaggttatttagactgaatgagagattaattga gcttaaaagtaagcaaaaagccgggaagaatatacattttgtagagtctgaaaggttgaaaaagcagcaaggaagaaaaa caagaaccggtaatgtcaaacagagaatatatgatcaaaatagaaaaagtaagtgtcgcaataattcattctatatcagg aaagaaaaaggcaattctcttagaaagaagtatggatcaaatataaaagattgtattcaaatttttcattcatgtacaag tagtggacctgtatatgtttgtactacatgccaccaaacatggttctttgatagtgtttgtaaagtagacaatatcaata gtgttaccttcaaaccaggtatcctaactggacttaagtcaatagggagcaaagagtggatttgtagaacttgtctgtcg aatttaaagaaaaacactattccaaaattatcagtgattaatggtatgagatggcctgataaacctaatgaactgaattt gcgaccaatggaagaaagaaccattgctcttagaattcctttcatgcaaatgagagaaatgcctcgaggaggacagtttt gtgttaaaggtaatgtaattaatgtaccagtagatatacaaccaactatcaaagctcttcctagacaagtggatgaaaca tacactatacctgttaaattgaaaaagaaaatgtcttacaagaaggttgactttacagaaaatatcagaccagctgttgt actgtctgctcttcgttggctaatgttagaaagtgatttatacaaagagtcgggtgttagtattgataactcttgggaac acgttataacaaataattctcaagaaatagttcaagagtttttagcatgcaatgcaacagagaatcgtcctaataatgaa tttgaggaaataaatgaccaagcaacatttaacaaagaattacctgaagatgaaatagactatgattctgacaattttag tgaaatcgatagcaatgaaaatgtcacagttcgtctagatgaaggatactacatttttagacaacttcgcaactcgcctg cttatttggcaaccaaaaagaaagacgtgtttgctatgattagacaacttggattgccaacatggttcatgtctctgtcc tcnaaaaaaattactgctgctgaagcaagagatcagtccacgcttgatactatagttcgtctagatgaaggatactacat ttttagacaacttcgcaactcgcctgcttatttggcaaccaaaaagaaagacgtgtttgctatgattagacaacttggat tgccaacatggttcatgtctctgtcctcggcagacactcgatggccgtttttgctcaaagctctctcaaagcttcaagga aaaattctgtcagactctgacgtaagcaatttgtcttggcaagaaaaaagtcgattggtacaaaaggatcccgttacttg ctctcgaatcttcaatgatagagtacagcagtttattaaaatgtttcttaaaagtcctcatgaacccgttggtcttgtta ccgactacttttaccgagttgaatttcaacaaaggggttcaccacatatacatatgcttgtatggatagctgatgcgccg aggtatcaaaaagatacagaagagtcaatagcagaattcgttgaccaatatgtaacttgctcaaatgaaaaagaagaact caatcaattaattgagctgcaaacacataagcattccaagacttgtagaaagaagggcaaagctgtatgtagatttggtt ttccactacctccattacgtgcaacaatgatattagaaccactagaaatagatgttgacaagtacaaaaagaaatacaat aatatccaagaaaagataaatacatataaagatggaatgaatttttcatacgaccagttcctgaaagatgtcgtatgtat gtcagaggaggaatacattaagtgtataagaagttctatcaacggccctaaagtctttcttaaaaggacacctgcagaaa tcagagtcaacatgtacaatgaaaatgtattactggcttggaatgctaatattgacttgcacgtagaagtaggtgcgcag gaagcatcatatttagtattacaaatgcctttaacaaaaggttcaagagatgtcatattcataaatacgtctccgccgga agaaagagttttactgttaaagcaattatctgatctggaagagcttagtccaaattctaccgatattcattaccagaata taattgcccgatattctaaaagacctagacaactagagaattggtgcctagcagattatgcttcacagcttgaagtaaaa tatccagatgacaaaaagaaagaagacacagtagagattaacgacgacgaacaagatgaagatgataattttgaattttc tgaggatgatgcacttgtcacacttaaaagtgggataataatcaggaggcgtatacatgacttgattttgcgatatgtac gctatagctgtaagacggatnnnnnnnnnnnnnnnnaagatgataattttgaattttctgaggatgatgcacttgtcaca cttaaaagtgggataataatcaggaggcgtatacatgacttgattttgcgatatgtacgctatagctgtaagacggatcc agaaaatcattatcgagaaaagctgctgttgtttatgccttggcgaaatgaatatgtagatttattaaatgggcatacta gctttcaggaacattataagaaagttcatttcttcgttgactacaaatgcaaaatgtacgaaaaaaattttgacgagatt gagcaagctatgcaacaagcggaagaggaatgtgaacagtatgatgatttggcaccaaatgcacagcaggcaaatgcaga tgacgaagctgagggtcaacaagaatcagaacaatttgtccattataatcctgatagacctcttgagcatagacgatatg atctaggcgctgatattggtgcttcaacttctgttccatgtgtcgaatgtcacaatgatagagtatctgatgaggagtat ttgaatttaatcagaagtttgaatatcaaacaaagagagttcttcacacatgttcttcattggataaagaccaaagacga accaatctatgcgtttttatcaggaggtgctggtgtcggaaaanctgttaagtgcatcgaaaatagaatttcacaaacga caagaccaagcattgtttggcgaacacaattcccattaaaaccagctgcagcaaagactgttcacaaatcacaaggatgc acagtggacgagcttgtcattgacttatcacaaacaagaacaagaaaaactcctcacatacattatgttgcgatgagtag agtaagaaaatttgaaaatctgtacattttgaattttaatagtgatgctcttacagctgatgaacgagtcaaagatgaaa tgaggagattgagagaggaagcaaacttgaagttgtgttatacccctttgtatgaagtagatccacgcagattcaaaata gcttttaacaacgcaagatcctttcacaaacatttccatgacattttagtagatccaaatatgtctgccgcagatatgat tggtataatggaatcaagactatgctctttagatcacgatgaaacttattcacttgaaggattcgatatgcacagatgtg atcaaaatgttcaagcaagaaataagcgtcctagtcatggactcatcttgtatttgaaaaggggtttagagtgtaggaaa ataatgaaacacagtactgacagtgtggaatttttgatatgcgagacgtctcactcacaaactggacatttacagttggt gctagtatacaaatccccagtatgcacactttccgacttcaaaaacgtcttcctgaacaatctcttaccaaacattgcct tatcaaaatctttgcttgtttttggtgactttaatttcgatgtttcatttggtcatgaagagtttatgaacttcatgtcg gaaaaatttcattgcaatcagtatgtaaacacaaataccacaaatatgaattcaactctagacttagtttttgcgaacaa agcacacgttgttacggaggcaatagagtgtagctggtcagatcataaagttataactgcattagtgtaa |
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Protein
| Protein ID | pfu_aug2.0_2205.1_18730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2205.1_18730.t1 MPKSKNWRRSAVKRGNAHATRETIDKTEDPGLIKNRTDDLEDPVLVKNRENELSTKRKQREDEKYRENELSAKRKQREDE KYRENELSAKRKKREDENYRENERRKELSAKRKQREDEKYRQNERNKELSTKRKNRKNDDYKNKELFAKRKKREDEQYRK NEQKKEGSLKKRARANRLFRLNERLIELKSKQKAGKNIHFVESERLKKQQGRKTRTGNVKQRIYDQNRKSKCRNNSFYIR KEKGNSLRKKYGSNIKDCIQIFHSCTSSGPVYVCTTCHQTWFFDSVCKVDNINSVTFKPGILTGLKSIGSKEWICRTCLS NLKKNTIPKLSVINGMRWPDKPNELNLRPMEERTIALRIPFMQMREMPRGGQFCVKGNVINVPVDIQPTIKALPRQVDET YTIPVKLKKKMSYKKVDFTENIRPAVVLSALRWLMLESDLYKESGVSIDNSWEHVITNNSQEIVQEFLACNATENRPNNE FEEINDQATFNKELPEDEIDYDSDNFSEIDSNENVTVRLDEGYYIFRQLRNSPAYLATKKKDVFAMIRQLGLPTWFMSLS XKKITAAEARDQSTLDTIVRLDEGYYIFRQLRNSPAYLATKKKDVFAMIRQLGLPTWFMSLSSADTRWPFLLKALSKLQG KILSDSDVSNLSWQEKSRLVQKDPVTCSRIFNDRVQQFIKMFLKSPHEPVGLVTDYFYRVEFQQRGSPHIHMLVWIADAP RYQKDTEESIAEFVDQYVTCSNEKEELNQLIELQTHKHSKTCRKKGKAVCRFGFPLPPLRATMILEPLEIDVDKYKKKYN NIQEKINTYKDGMNFSYDQFLKDVVCMSEEEYIKCIRSSINGPKVFLKRTPAEIRVNMYNENVLLAWNANIDLHVEVGAQ EASYLVLQMPLTKGSRDVIFINTSPPEERVLLLKQLSDLEELSPNSTDIHYQNIIARYSKRPRQLENWCLADYASQLEVK YPDDKKKEDTVEINDDEQDEDDNFEFSEDDALVTLKSGIIIRRRIHDLILRYVRYSCKTDXXXXXXDDNFEFSEDDALVT LKSGIIIRRRIHDLILRYVRYSCKTDPENHYREKLLLFMPWRNEYVDLLNGHTSFQEHYKKVHFFVDYKCKMYEKNFDEI EQAMQQAEEECEQYDDLAPNAQQANADDEAEGQQESEQFVHYNPDRPLEHRRYDLGADIGASTSVPCVECHNDRVSDEEY LNLIRSLNIKQREFFTHVLHWIKTKDEPIYAFLSGGAGVGKXVKCIENRISQTTRPSIVWRTQFPLKPAAAKTVHKSQGC TVDELVIDLSQTRTRKTPHIHYVAMSRVRKFENLYILNFNSDALTADERVKDEMRRLREEANLKLCYTPLYEVDPRRFKI AFNNARSFHKHFHDILVDPNMSAADMIGIMESRLCSLDHDETYSLEGFDMHRCDQNVQARNKRPSHGLILYLKRGLECRK IMKHSTDSVEFLICETSHSQTGHLQLVLVYKSPVCTLSDFKNVFLNNLLPNIALSKSLLVFGDFNFDVSFGHEEFMNFMS EKFHCNQYVNTNTTNMNSTLDLVFANKAHVVTEAIECSWSDHKVITALV |
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