Gene
| Gene Model ID | pfu_aug2.0_221.1_03814 |
|---|---|
| Locus | scaffold221.1 : 76797 ... 82625 : - |
| To GenomeBrowser | scaffold221.1:76797..82625 |
| Genes list of scaffold | scaffold221.1 |
| Synonym | pfu_aug1.0_1464.1_00726 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_221.1_03814.t1 | 4 | 1 | LRR_8 | 88 | 120 | 3.4e-14 | 52.3 | 5.0e-06 | 0.0082 | 15.8 |
| pfu_aug2.0_221.1_03814.t1 | 4 | 1 | LRR_4 | 88 | 120 | 4.3e-09 | 35.7 | 0.0047 | 7.8 | 6.2 |
| pfu_aug2.0_221.1_03814.t1 | 3 | 1 | LRR_5 | 94 | 190 | 6.5e-06 | 25.8 | 9.2e-05 | 0.15 | 11.7 |
| pfu_aug2.0_221.1_03814.t1 | 4 | 2 | LRR_4 | 112 | 145 | 4.3e-09 | 35.7 | 0.027 | 44.0 | 3.8 |
| pfu_aug2.0_221.1_03814.t1 | 4 | 2 | LRR_8 | 206 | 224 | 3.4e-14 | 52.3 | 2.6e-05 | 0.044 | 13.5 |
| pfu_aug2.0_221.1_03814.t1 | 4 | 3 | LRR_4 | 206 | 227 | 4.3e-09 | 35.7 | 2.5e-06 | 0.0041 | 16.6 |
| pfu_aug2.0_221.1_03814.t1 | 3 | 2 | LRR_5 | 210 | 219 | 6.5e-06 | 25.8 | 4.2 | 7000.0 | -3.4 |
| pfu_aug2.0_221.1_03814.t1 | 4 | 3 | LRR_8 | 241 | 299 | 3.4e-14 | 52.3 | 2.5e-09 | 4.1e-06 | 26.4 |
| pfu_aug2.0_221.1_03814.t1 | 3 | 3 | LRR_5 | 254 | 310 | 6.5e-06 | 25.8 | 2.1e-05 | 0.035 | 13.8 |
| pfu_aug2.0_221.1_03814.t1 | 4 | 4 | LRR_4 | 263 | 325 | 4.3e-09 | 35.7 | 4.0e-05 | 0.066 | 12.8 |
| pfu_aug2.0_221.1_03814.t1 | 4 | 4 | LRR_8 | 289 | 323 | 3.4e-14 | 52.3 | 3.7e-05 | 0.062 | 13.0 |
| pfu_aug2.0_221.1_03814.t1 | 1 | 1 | TIR | 437 | 570 | 5.7e-27 | 93.8 | 5.7e-30 | 9.4e-27 | 93.1 |
| pfu_aug2.0_221.1_03814.t1 | 1 | 1 | TIR_2 | 438 | 537 | 9.9e-13 | 48.1 | 1.1e-15 | 1.8e-12 | 47.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_221.1_03814.t1 | gi|700427052|ref|XP_009952081.1| | PREDICTED: toll-like receptor 2 [Leptosomus discolor] | 3.00018e-42 |
Transcript
| Transcript ID | pfu_aug2.0_221.1_03814.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03814.t1 atgaccagacattcccttacaacctatcttacaacgattctactcatcccgttcatcgtgtcatacgagtttaagccgtt tccatgcccgccaaagatatgtcactgcatgaggactcaaaggaaagctgactgttccggtcacgccaaaaaattatcat tcatcccagatctaccaccatatgtacagagtgtgtaccttaataaggactattttcctagtatatcacgacatgtgttg aaatctctactaccacttcctcttaagagacttacgtttatatcgtctaatgtgacatcagtcagtgatgaggcgtttac aaaacttaagttcttgagggatttagatttcagttcaaatctacgtatcaatgttacgcaattaaagaattcatttaaaa gtttgcagagtaaagaattagggcagctgacattgaactctatgggctggacatctaagactatcttgacaattgaagat ctagacataggaagcatgaaaggaggtgtagacactgtttcccataatgcctttgacatccaaactcttaagaaatttag atttgacttaaataattttaaatttcaaatcaactggccacattatgccatcagaggatcccttcgaaactgtacaaagt tggaatatctcgatttatcgtacaatcacttacccaaatggactgatggcgttcgtgccctcttaggtgaattaagagtt ttacataccttacgtctagtcaatgtctattggtcgttgattcctgatcacattttcaagcttgtaccaaatgtacgtga cattattctttctcataatcgtttatctaaattgaatgaaagtctctttgcaaatgtctcaaaaatacaaaaactatttc tagatgttaaccgaattgcgtacgttggacccaatacttttacagattcactttggaattcactgaaactgctagactta tcaggaaacccttttgtctgtaactgtgacctattgtggttcagtaaatttttgcggacaaagagatcaaacctctctct ccatcaatatccaaggttatacttatgcaattctcctcccgaaaggaaaggcttgatactgaaatctttcacaattactg acgaggactgtcaggcgcctagtaaccttttaaccattctttcgtgcaccggttctgtggtattgttcctcttgataaca tcactgatactgtacaaggcaagatggcagatacgatattggttatacctacttcggttcagacggtctgagtatagccg tatcagtgaaattaatttcaaatatgacgcttttgtgatttatgcggatgatgacagcgaattcgttcatgaaactctca tgcagaaacttgaaggggaacatcagatttcactttgtattcacttcagagatttccaggtagggaaaatcatagccgac aatatcgtggaatgtatgtcggagtgtcgccatgtgcttgtcgtgctatctccgaacttttgtaacagtagatggtgtaa atttgagctggacatcgctcaggatagatggctgaataacgagacggaagccttggttctggttatgttacaggagatcg atagtcggaatatgacgaaatacatgcgtgctatactgaaaacaacaacatacgccatgtggacagacaatcagcaagga caagaactattctggacacaacttctatctgctttaagctaa |
|
Protein
| Protein ID | pfu_aug2.0_221.1_03814.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03814.t1 MTRHSLTTYLTTILLIPFIVSYEFKPFPCPPKICHCMRTQRKADCSGHAKKLSFIPDLPPYVQSVYLNKDYFPSISRHVL KSLLPLPLKRLTFISSNVTSVSDEAFTKLKFLRDLDFSSNLRINVTQLKNSFKSLQSKELGQLTLNSMGWTSKTILTIED LDIGSMKGGVDTVSHNAFDIQTLKKFRFDLNNFKFQINWPHYAIRGSLRNCTKLEYLDLSYNHLPKWTDGVRALLGELRV LHTLRLVNVYWSLIPDHIFKLVPNVRDIILSHNRLSKLNESLFANVSKIQKLFLDVNRIAYVGPNTFTDSLWNSLKLLDL SGNPFVCNCDLLWFSKFLRTKRSNLSLHQYPRLYLCNSPPERKGLILKSFTITDEDCQAPSNLLTILSCTGSVVLFLLIT SLILYKARWQIRYWLYLLRFRRSEYSRISEINFKYDAFVIYADDDSEFVHETLMQKLEGEHQISLCIHFRDFQVGKIIAD NIVECMSECRHVLVVLSPNFCNSRWCKFELDIAQDRWLNNETEALVLVMLQEIDSRNMTKYMRAILKTTTYAMWTDNQQG QELFWTQLLSALS |
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