Gene
| Gene Model ID | pfu_aug2.0_221.1_03815 |
|---|---|
| Locus | scaffold221.1 : 92234 ... 95785 : - |
| To GenomeBrowser | scaffold221.1:92234..95785 |
| Genes list of scaffold | scaffold221.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_221.1_03815.t1 | 9 | 1 | LRR_4 | 53 | 74 | 2.1e-20 | 71.9 | 0.056 | 83.0 | 2.9 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 1 | LRR_8 | 64 | 124 | 7.5e-31 | 105.6 | 8.8e-09 | 1.3e-05 | 24.8 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 1 | LRR_1 | 65 | 84 | 1.8e-10 | 39.3 | 0.024 | 35.0 | 4.9 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 2 | LRR_8 | 90 | 129 | 7.5e-31 | 105.6 | 2.4e-07 | 0.00035 | 20.2 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 2 | LRR_1 | 90 | 111 | 1.8e-10 | 39.3 | 7.3 | 11000.0 | -2.7 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 2 | LRR_4 | 106 | 130 | 2.1e-20 | 71.9 | 0.026 | 39.0 | 4.0 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 3 | LRR_1 | 113 | 129 | 1.8e-10 | 39.3 | 0.048 | 72.0 | 4.0 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 3 | LRR_8 | 155 | 204 | 7.5e-31 | 105.6 | 3.4e-06 | 0.005 | 16.5 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 4 | LRR_8 | 170 | 226 | 7.5e-31 | 105.6 | 4.4e-09 | 6.5e-06 | 25.8 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 3 | LRR_4 | 170 | 183 | 2.1e-20 | 71.9 | 0.0084 | 12.0 | 5.5 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 4 | LRR_1 | 171 | 182 | 1.8e-10 | 39.3 | 0.022 | 33.0 | 5.0 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 4 | LRR_4 | 196 | 227 | 2.1e-20 | 71.9 | 4.3e-07 | 0.00064 | 19.2 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 5 | LRR_1 | 215 | 237 | 1.8e-10 | 39.3 | 0.00022 | 0.32 | 11.1 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 6 | LRR_1 | 238 | 254 | 1.8e-10 | 39.3 | 0.067 | 99.0 | 3.6 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 5 | LRR_8 | 240 | 292 | 7.5e-31 | 105.6 | 7.7e-05 | 0.11 | 12.2 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 5 | LRR_4 | 240 | 279 | 2.1e-20 | 71.9 | 0.023 | 34.0 | 4.2 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 6 | LRR_8 | 265 | 320 | 7.5e-31 | 105.6 | 1.9e-12 | 2.9e-09 | 36.5 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 7 | LRR_1 | 266 | 282 | 1.8e-10 | 39.3 | 0.16 | 230.0 | 2.4 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 7 | LRR_8 | 289 | 321 | 7.5e-31 | 105.6 | 2.5e-09 | 3.7e-06 | 26.5 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 6 | LRR_4 | 289 | 321 | 2.1e-20 | 71.9 | 7.8e-07 | 0.0012 | 18.4 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 8 | LRR_1 | 290 | 312 | 1.8e-10 | 39.3 | 0.0003 | 0.44 | 10.7 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 7 | LRR_4 | 340 | 381 | 2.1e-20 | 71.9 | 1.7e-05 | 0.025 | 14.2 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 8 | LRR_8 | 341 | 404 | 7.5e-31 | 105.6 | 1.2e-05 | 0.017 | 14.8 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 9 | LRR_1 | 342 | 351 | 1.8e-10 | 39.3 | 10.0 | 15000.0 | -3.2 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 8 | LRR_4 | 370 | 435 | 2.1e-20 | 71.9 | 0.0067 | 10.0 | 5.8 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 10 | LRR_1 | 370 | 389 | 1.8e-10 | 39.3 | 0.00068 | 1.0 | 9.6 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 9 | LRR_8 | 421 | 480 | 7.5e-31 | 105.6 | 5.3e-08 | 7.9e-05 | 22.3 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 11 | LRR_1 | 422 | 438 | 1.8e-10 | 39.3 | 0.25 | 370.0 | 1.8 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 12 | LRR_1 | 445 | 465 | 1.8e-10 | 39.3 | 0.0034 | 5.0 | 7.5 |
| pfu_aug2.0_221.1_03815.t1 | 9 | 9 | LRR_4 | 446 | 483 | 2.1e-20 | 71.9 | 1.1e-06 | 0.0017 | 17.9 |
| pfu_aug2.0_221.1_03815.t1 | 13 | 13 | LRR_1 | 472 | 483 | 1.8e-10 | 39.3 | 0.14 | 210.0 | 2.5 |
| pfu_aug2.0_221.1_03815.t1 | 1 | 1 | TIR | 594 | 727 | 8.6e-26 | 90.0 | 1.1e-28 | 1.7e-25 | 89.1 |
| pfu_aug2.0_221.1_03815.t1 | 1 | 1 | TIR_2 | 595 | 690 | 1.1e-11 | 44.7 | 1.8e-14 | 2.6e-11 | 43.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_221.1_03815.t1 | gi|676462581|ref|XP_009056315.1| | hypothetical protein LOTGIDRAFT_232844 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_221.1_03815.t1 | gi|642930767|ref|XP_973341.3| | PREDICTED: toll-like receptor 2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_221.1_03815.t1 | gi|163954961|ref|NP_001106664.1| | Toll-like receptor 22 precursor [Takifugu rubripes] | 2.8026e-45 |
| pfu_aug2.0_221.1_03815.t1 | gi|58257858|gb|AAW69372.1| | 7.00649e-45 |
Transcript
| Transcript ID | pfu_aug2.0_221.1_03815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03815.t1 atgggcattacgagtactagtatataccttgctgctcttcttttcctactgtctgacaggatagtttcaactgaatctac agataaagacatctgtccgggggtttgtcgatgtaaaccaaaacaaggatctgctaggtgcctgatcaaacataggcagc tatcagaaataccacagttaccgacgtatgtaagaaagctgtatttggattcaaactttatttttgaaataaccaacagc acatttgaacatccatcgttaaaagctctaacattgttgtcaatgaaagcatgtagaatgagattaattgaagaaaattc gcttgagcatttagatcatctgaatactttgtacttaggttcaaataaccttctgaacatttcatctttaagattagctc tggcaagtctaaaacagaaggaaatgaaaactctcagttttaatttcatgaactggacatctcaacatttatctacgagg atattcgaatatcttgcaaatcacactgtcaaaagattatctttatcaggaaaccacatcgaatcatggttggatactgc atcggtaggattaaatgatgtatcaaaactgtcactttcaaagaacaaaatcaacacatgtgaacatttgtcttctctgg tttctttggaacatctggatttgagcaataatatgctaaagagatgtgacatacaaatgcttccaaaatatttactaagt ctgcagctgtcaaataatctcttcaaaaagtttccgaaattttgtttaaatgatggtagtactgctttacttccacatct ggagagacttaaaataaaaaataaccaaataattaccataagaaatattctatatccgtgcttcccctcacttacatact tggcattaagtggaaattcaatcaagcgtattcctgcacagactttctctcatatgcctcgtttgcttgaattacatttg acaatatttagaaagtggaatgcagtaaaattcataggttctcgagcatttgatataccgacattggaaaaactttactt tataggaaataggtatgacttcgaaaaaacaactcattcagattctgtaacgtttggtacctgtagaaatcttgaaatct tggatctatctcataactttctaccaaagtcaaacaaacaattactcagactacttggtggactttataaacttagaaaa ttacgtttagtaagtgtaggatggttatcaatacctgacattttcttcaatatgtttcaaaatgtgcacaaaattcatct ttctcaaaatagcatctccaacttgaaaggtgatttctttcccgataagatgaagatacggaaattgtatttagatggta attccttttctagtttgggtccaaaaacgttttccgaatcattctggaaatctatcagaagcgttgacttatctggaaac ccatatacatgcaactgtgatcttttgtggtttcggaataagctaaagagttcaagttctttatttcaccagtatccggg cgattacatctgtacctcgccgaatgaattgagaggccttgaagttagcaagtttaatgtaacggatgaggactgtagaa ctgaatcggtactactaataacgctgtcatcgtcgggttcagtttgcgttattgcctgtttaatcgcaatatgtctttac aaagtgagatggcatattaggtacttggtttacattctccgatatagaaagagtgacccaataaagagtaatggatacga agttaactacaagtatgatgcctttatttcctatgcagcggaggatggcgattttgttcacaaaatcctgcttaataagc ttgagaaagaacacggatacaaactatgtattcatgcaagagattttgaagtgggaagaattatagcagataacattgca gaaaatatgagttctagtaggcaagctttgctaattatgtcacgaaatttctgcaagagtaaatggtgtaggtttgaaca acttattgctcttgatagatggctcaaccacgagtcgggaccaattgtaatcataatgttaggggagttaaatagtagaa atatggacaaagacacgaaaacactcctcaagactacaacgtacgcccagtggacctcgaatgaaatgggccaagaagtg ttttgggatcaattgttgtcttctctaaaaagatag |
|
Protein
| Protein ID | pfu_aug2.0_221.1_03815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03815.t1 MGITSTSIYLAALLFLLSDRIVSTESTDKDICPGVCRCKPKQGSARCLIKHRQLSEIPQLPTYVRKLYLDSNFIFEITNS TFEHPSLKALTLLSMKACRMRLIEENSLEHLDHLNTLYLGSNNLLNISSLRLALASLKQKEMKTLSFNFMNWTSQHLSTR IFEYLANHTVKRLSLSGNHIESWLDTASVGLNDVSKLSLSKNKINTCEHLSSLVSLEHLDLSNNMLKRCDIQMLPKYLLS LQLSNNLFKKFPKFCLNDGSTALLPHLERLKIKNNQIITIRNILYPCFPSLTYLALSGNSIKRIPAQTFSHMPRLLELHL TIFRKWNAVKFIGSRAFDIPTLEKLYFIGNRYDFEKTTHSDSVTFGTCRNLEILDLSHNFLPKSNKQLLRLLGGLYKLRK LRLVSVGWLSIPDIFFNMFQNVHKIHLSQNSISNLKGDFFPDKMKIRKLYLDGNSFSSLGPKTFSESFWKSIRSVDLSGN PYTCNCDLLWFRNKLKSSSSLFHQYPGDYICTSPNELRGLEVSKFNVTDEDCRTESVLLITLSSSGSVCVIACLIAICLY KVRWHIRYLVYILRYRKSDPIKSNGYEVNYKYDAFISYAAEDGDFVHKILLNKLEKEHGYKLCIHARDFEVGRIIADNIA ENMSSSRQALLIMSRNFCKSKWCRFEQLIALDRWLNHESGPIVIIMLGELNSRNMDKDTKTLLKTTTYAQWTSNEMGQEV FWDQLLSSLKR |
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