Gene
| Gene Model ID | pfu_aug2.0_221.1_03824 |
|---|---|
| Locus | scaffold221.1 : 194261 ... 205860 : - |
| To GenomeBrowser | scaffold221.1:194261..205860 |
| Genes list of scaffold | scaffold221.1 |
| Synonym | pfu_aug1.0_29989.1_33740 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein tyrosine phosphatase type iva 2 isoform x1 | GO:0004725 GO:0005769 GO:0005886 GO:0008138 GO:0035335 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_221.1_03824.t1 | 1 | 1 | DSPc | 14 | 63 | 3.4e-07 | 29.9 | 7.1e-11 | 3.5e-07 | 29.8 |
| pfu_aug2.0_221.1_03824.t1 | 1 | 1 | Y_phosphatase | 16 | 69 | 8.3e-06 | 25.3 | 2.1e-09 | 1.0e-05 | 24.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_221.1_03824.t1 | gi|676430505|ref|XP_009045948.1| | hypothetical protein LOTGIDRAFT_171507 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_221.1_03824.t1 | gi|241997692|ref|XP_002433495.1| | protein-tyrosine phosphotase, putative [Ixodes scapularis] | 5.60519e-45 |
| pfu_aug2.0_221.1_03824.t1 | gi|573886974|ref|XP_006631271.1| | PREDICTED: protein tyrosine phosphatase type IVA 2-like isoform X1 [Lepisosteus oculatus] | 2.00386e-43 |
| pfu_aug2.0_221.1_03824.t1 | gi|507655463|ref|XP_004705077.1| | PREDICTED: protein tyrosine phosphatase type IVA 2 [Echinops telfairi] | 2.00386e-43 |
| pfu_aug2.0_221.1_03824.t1 | gi|573886976|ref|XP_006631272.1| | PREDICTED: protein tyrosine phosphatase type IVA 2-like isoform X2 [Lepisosteus oculatus] | 2.99878e-43 |
Transcript
| Transcript ID | pfu_aug2.0_221.1_03824.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03824.t1 atggatgaatggttcaatctgctaaagacacgcttcaaagaagaacctggatgttgtgttgctgtacactgtgtggcggg tcttggaagggcacctgttttggtggctttagcattgatagaatgtggcatgaagtttgaggatgctgtggaactcatac ggcagaaaagacgaggtgccatcaacgccaaacaactggctttcctcgagcattaccgtcctaaatctcgtctaaagcag agaggcaatggtcataagcagtgctgtataatgtag |
|
Protein
| Protein ID | pfu_aug2.0_221.1_03824.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03824.t1 MDEWFNLLKTRFKEEPGCCVAVHCVAGLGRAPVLVALALIECGMKFEDAVELIRQKRRGAINAKQLAFLEHYRPKSRLKQ RGNGHKQCCIM |
|