Gene
| Gene Model ID | pfu_aug2.0_221.1_03825 |
|---|---|
| Locus | scaffold221.1 : 224694 ... 236840 : - |
| To GenomeBrowser | scaffold221.1:224694..236840 |
| Genes list of scaffold | scaffold221.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| stromal cell-derived factor 2-like | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_221.1_03825.t1 | 1 | 1 | MIR | 48 | 117 | 3.6e-11 | 42.9 | 3.5e-15 | 5.2e-11 | 42.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_221.1_03825.t1 | gi|524913883|ref|XP_005111764.1| | PREDICTED: stromal cell-derived factor 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_221.1_03825.t1 | gi|676443528|ref|XP_009050143.1| | hypothetical protein LOTGIDRAFT_151586 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_221.1_03825.t1 | gi|260828681|ref|XP_002609291.1| | hypothetical protein BRAFLDRAFT_124740 [Branchiostoma floridae] | 5.99756e-43 |
| pfu_aug2.0_221.1_03825.t1 | gi|675875948|ref|XP_009023534.1| | hypothetical protein HELRODRAFT_84665, partial [Helobdella robusta] | 1.99965e-42 |
| pfu_aug2.0_221.1_03825.t1 | gi|291232590|ref|XP_002736235.1| | PREDICTED: stromal cell-derived factor 2-like [Saccoglossus kowalevskii] | 4.99997e-41 |
Transcript
| Transcript ID | pfu_aug2.0_221.1_03825.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03825.t1 atggcgtggataaactattttcagtacctgttctcttgttttatagcatcagtgttgttcaattatgttagaggttttga ctatgacttcatcacatgtggatcaacactcaagttaaagaatagttaccatggtgtccgtttacattcccacgatgtca agtatgggtcaggtagtggacagcagtcagtaacagctgtagattcaacagatgaccataacagctattggcagattaaa gctaaaactggtaccgattgtttaagaggcacacctgtaaaatgtggccagacgcttcgcctgatgcacttatctacaaa gagaaatttacacagccatcattttcagacatcggctatgaaaaggtaa |
|
Protein
| Protein ID | pfu_aug2.0_221.1_03825.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03825.t1 MAWINYFQYLFSCFIASVLFNYVRGFDYDFITCGSTLKLKNSYHGVRLHSHDVKYGSGSGQQSVTAVDSTDDHNSYWQIK AKTGTDCLRGTPVKCGQTLRLMHLSTKRNLHSHHFQTSAMKR |
|