Gene
| Gene Model ID | pfu_aug2.0_221.1_03827 |
|---|---|
| Locus | scaffold221.1 : 271366 ... 274490 : - |
| To GenomeBrowser | scaffold221.1:271366..274490 |
| Genes list of scaffold | scaffold221.1 |
| Synonym | pfu_aug1.0_11471.1_68338 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_221.1_03827.t1 | 1 | 1 | HRM | 34 | 85 | 1.1e-13 | 51.0 | 4.6e-17 | 2.3e-13 | 49.9 |
| pfu_aug2.0_221.1_03827.t1 | 1 | 1 | 7tm_2 | 144 | 380 | 3.0e-18 | 65.8 | 8.0e-22 | 3.9e-18 | 65.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_221.1_03827.t1 | gi|759054478|ref|XP_011336445.1| | PREDICTED: PDF receptor-like [Cerapachys biroi] | 1.0e-28 |
| pfu_aug2.0_221.1_03827.t1 | gi|746867422|ref|XP_011064807.1| | PREDICTED: PDF receptor isoform X3 [Acromyrmex echinatior] | 5.0e-28 |
| pfu_aug2.0_221.1_03827.t1 | gi|746867418|ref|XP_011064805.1| | PREDICTED: PDF receptor isoform X1 [Acromyrmex echinatior] | 5.0e-28 |
| pfu_aug2.0_221.1_03827.t1 | gi|746867420|ref|XP_011064806.1| | PREDICTED: PDF receptor isoform X2 [Acromyrmex echinatior] | 5.0e-28 |
| pfu_aug2.0_221.1_03827.t1 | gi|746867425|ref|XP_011064808.1| | PREDICTED: PDF receptor isoform X4 [Acromyrmex echinatior] | 5.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_221.1_03827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03827.t1 atgatgaatacgaaaattcgaggacagttttacccgtcaactttggaagaatgtttcgaaagtcaaggggatgcaccata ttcgattccacccgaaatgttctgcaatgcaacatgggacaccgttctctgctggccacctactttggtaggatcaacga cgaagttaccttgtccgaaatatctgaacctcggaactgggaaatatgcgtccaaatcatgtggaattaacggaaaatgg attggaattcatcctggaaagaacactttcccgaaagaactttacccaggctggacaaattactcggaatgtctcggtct ggactacgacatcaaaaatgtgaatgacagcacagattttaacgtttcagataaggcgcctgtgagtttaggcgcgcttc cattagcgcataacggcgccgatgttcttggttccatcatgcttatgatttctctgatattgctggtagcatcgcttgtg atcacctgttgctctcggacggtaagtacaacacggaccaagttgtataagaacttttttgctgcttttatcatacatga tactcttgaacttgtcatccgacttggacgttcagtagactcaaatgacgtagtaaatgacgtagaaacatgcgtttcta tcggcgtgatggttaccttgacaacctctgctatctacacttggcttgccatcattgccatatgttttacatttacaatg aaagggattgtcatagaaacaaaaatttactatatactgtgtcttctcggatggtttgtaccgaccgttgtgacaatcac gtggttaagcgtcacagttttggaaggaaatttgaattgctggtacggagaactttacatagcaaagcttgagtcaagtt tctggatcatagaatctatcaacataacactgctctgttcgacgtgggtcttgttgatacattttctatggaaattcaac gaacacaaatcacacaggcaattttcagataacaaggagctttgcgccgagatgactttcataaagcagagtgcattcaa agttcttgtggttctatgctttgtaactgcagcttatatcatttacgtcacttcctctcaggataaactttcggaaccta tcgcttacgcattggttttgacattattttcccgcgggataacgacggccatatttctgtgtttcttggaggagagttgt aaatgttgggacggtgtgtattccgtggagaattcttctgaagaggagagcatctacagtacgttacctacctga |
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Protein
| Protein ID | pfu_aug2.0_221.1_03827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03827.t1 MMNTKIRGQFYPSTLEECFESQGDAPYSIPPEMFCNATWDTVLCWPPTLVGSTTKLPCPKYLNLGTGKYASKSCGINGKW IGIHPGKNTFPKELYPGWTNYSECLGLDYDIKNVNDSTDFNVSDKAPVSLGALPLAHNGADVLGSIMLMISLILLVASLV ITCCSRTVSTTRTKLYKNFFAAFIIHDTLELVIRLGRSVDSNDVVNDVETCVSIGVMVTLTTSAIYTWLAIIAICFTFTM KGIVIETKIYYILCLLGWFVPTVVTITWLSVTVLEGNLNCWYGELYIAKLESSFWIIESINITLLCSTWVLLIHFLWKFN EHKSHRQFSDNKELCAEMTFIKQSAFKVLVVLCFVTAAYIIYVTSSQDKLSEPIAYALVLTLFSRGITTAIFLCFLEESC KCWDGVYSVENSSEEESIYSTLPT |
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