Gene
| Gene Model ID | pfu_aug2.0_221.1_03833 |
|---|---|
| Locus | scaffold221.1 : 319156 ... 387581 : + |
| To GenomeBrowser | scaffold221.1:319156..387581 |
| Genes list of scaffold | scaffold221.1 |
| Synonym | pfu_aug1.0_257.1_50751 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein kinase c alpha type | GO:0000088 GO:0000188 GO:0000302 GO:0001750 GO:0001934 GO:0001938 GO:0002026 GO:0002062 GO:0002159 GO:0004698 GO:0005524 GO:0005654 GO:0005783 GO:0005829 GO:0005886 GO:0006112 GO:0006874 GO:0006937 GO:0007077 GO:0007173 GO:0007190 GO:0007194 GO:0007202 GO:0007268 GO:0007568 GO:0007611 GO:0008270 GO:0008285 GO:0008543 GO:0009612 GO:0010613 GO:0017148 GO:0019899 GO:0021955 GO:0022400 GO:0030198 GO:0030425 GO:0030593 GO:0031666 GO:0031966 GO:0032355 GO:0034351 GO:0035403 GO:0035408 GO:0036289 GO:0043025 GO:0043234 GO:0043536 GO:0045087 GO:0045121 GO:0045177 GO:0045471 GO:0045651 GO:0045766 GO:0045785 GO:0045822 GO:0045921 GO:0045931 GO:0046325 GO:0046627 GO:0046677 GO:0048010 GO:0048011 GO:0048259 GO:0048471 GO:0048661 GO:0050729 GO:0050730 GO:0050796 GO:0050930 GO:0051412 GO:0051965 GO:0070062 GO:0070374 GO:0070555 GO:0071322 GO:0090330 GO:0097193 GO:2000707 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_221.1_03833.t1 | 2 | 1 | C1_1 | 31 | 81 | 3.1e-20 | 71.6 | 9.0e-21 | 1.5e-17 | 63.0 |
| pfu_aug2.0_221.1_03833.t1 | 2 | 2 | C1_1 | 116 | 142 | 3.1e-20 | 71.6 | 1.6e-05 | 0.027 | 14.1 |
| pfu_aug2.0_221.1_03833.t1 | 1 | 1 | C2 | 162 | 246 | 3.3e-28 | 97.3 | 4.0e-31 | 6.7e-28 | 96.3 |
| pfu_aug2.0_221.1_03833.t1 | 2 | 1 | Pkinase | 191 | 241 | 0.0 | 226.2 | 1.1 | 1800.0 | -2.2 |
| pfu_aug2.0_221.1_03833.t1 | 2 | 2 | Pkinase | 318 | 561 | 0.0 | 226.2 | 0.0 | 0.0 | 224.9 |
| pfu_aug2.0_221.1_03833.t1 | 1 | 1 | Pkinase_Tyr | 319 | 558 | 1.6e-38 | 132.2 | 1.6e-41 | 2.6e-38 | 131.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_221.1_03833.t1 | gi|676490577|ref|XP_009065315.1| | hypothetical protein LOTGIDRAFT_211133 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_221.1_03833.t1 | gi|325197126|ref|NP_001191415.1| | calcium-dependent protein kinase C [Aplysia californica] | 0.0 |
| pfu_aug2.0_221.1_03833.t1 | gi|164663791|ref|NP_035231.2| | protein kinase C alpha type [Mus musculus] | 0.0 |
| pfu_aug2.0_221.1_03833.t1 | gi|386781719|ref|NP_001247662.1| | protein kinase C alpha type [Macaca mulatta] | 0.0 |
| pfu_aug2.0_221.1_03833.t1 | gi|4506067|ref|NP_002728.1| | protein kinase C alpha type [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_221.1_03833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03833.t1 atggctgataacggagtggagcaaaatccctccaaaggtgtacagagacggggagctctacgacagaagaatgttcatga agtgaagaatcataaattcgtcgcaagattttttaagcagccgactttttgtagccattgtaaggatttcatctggggat ttggtaaacaggggttccaatgtcaaatttgtagttttgttgtacacaagaggtgccatgagttcgtatcatttgcttgt ccaggtattgacgagggacctgattcggacccttggttcttgcaattagagacagactctttgttggtgatgtacacatg gtgtgttaacatttggtcggcagaccctgtttggtgctgtacacatgcatgtgacatgaatgttcataaaagatgtgaaa agaatgttccaaagttatgtggggtggatcacacggagaggcgggggcggatcaaattaaaggttcagtgccaaaacgga aagctgcatgtagaagttgtggaagctagaaatttaattcctatggatccaaatggtttagccgatccttacgtcaaagt gaagctcatccctgatgcaaaaacaaagcaaaagacaaagacgataaaagcaacactaaacccagaatggagagaagcat ttacttttgaattgcattcagaggaccattccaagagattgtctgtagaagtttgggactgggacaggacgtcacggaat gatttcatgggatcattatcgtttgggatctcagaaatactaaaggaacctgctgacggctggttcaagctccttagtca ggaggaaggtgaattctacggaatacccgtcaccgacgacgcagctcatactattttagaacttaaacgtactctaccta ggccgccccctccacaagttgatatatctaggaacattagcaagcaagatactgtacgagcaacagatttcaacttcctt actgtgctaggaaaaggaagctttggaaaagtagttttagctgaaaggaaaggaacagatgaactttacgcaattaaaat tctcaaaaaagatgtgatcatccaagatgacgatgtagagtgcactatgatagaaaaacgtgtcttggctttacccacca aaccaccattccttgttcaactacactcctgtttccaaaccatggatcgcctttactttgtcatggaatatgtaaatgga ggagatctcatgtacagaatccagcaagagggcaagttcaaagaacctgtggctgcattctatgcagcagagattgccat tggattattttacctccattctcaaggaatcatatacagagatctgaagttagacaatgtgatgttggattctgaaggtc atatcaagatagctgattttggaatgtgtaaagaaggaataatggacagtaaaacaacacggacattctgtggaacgcca gactacatcgctcctgaaatagtgctgtatcaaccatacgggaagtcagtagactggtgggcctatggtgtgttactata tgaaatgctggctggtcagccaccatttgatggagaagatgaagaggagctcttcacatcaatcacagatcacaatgtat catacccaaaatccatgtccagggaggcagtgtctatatgtaaagctctcttgacaaagaatcccaccaagcgtctcgga tgtcttgcgtcaggggagagagacatcaaagaccatgcattcttcaaaaggatcatgtgggagaaaatcgaacaacgaga agttcaacccccatacaagcctaaaattaacaatccacgacaagccgaaaactttgacaagatgttcaccggaacaaaac tgaaaaacaccccaacagacagtgtcgttataatgaacattgatgagaacgcattccgggactttagttatgtcaatccc ttttacgtaaatatcatcaaaacctaa |
|
Protein
| Protein ID | pfu_aug2.0_221.1_03833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_221.1_03833.t1 MADNGVEQNPSKGVQRRGALRQKNVHEVKNHKFVARFFKQPTFCSHCKDFIWGFGKQGFQCQICSFVVHKRCHEFVSFAC PGIDEGPDSDPWFLQLETDSLLVMYTWCVNIWSADPVWCCTHACDMNVHKRCEKNVPKLCGVDHTERRGRIKLKVQCQNG KLHVEVVEARNLIPMDPNGLADPYVKVKLIPDAKTKQKTKTIKATLNPEWREAFTFELHSEDHSKRLSVEVWDWDRTSRN DFMGSLSFGISEILKEPADGWFKLLSQEEGEFYGIPVTDDAAHTILELKRTLPRPPPPQVDISRNISKQDTVRATDFNFL TVLGKGSFGKVVLAERKGTDELYAIKILKKDVIIQDDDVECTMIEKRVLALPTKPPFLVQLHSCFQTMDRLYFVMEYVNG GDLMYRIQQEGKFKEPVAAFYAAEIAIGLFYLHSQGIIYRDLKLDNVMLDSEGHIKIADFGMCKEGIMDSKTTRTFCGTP DYIAPEIVLYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEEELFTSITDHNVSYPKSMSREAVSICKALLTKNPTKRLG CLASGERDIKDHAFFKRIMWEKIEQREVQPPYKPKINNPRQAENFDKMFTGTKLKNTPTDSVVIMNIDENAFRDFSYVNP FYVNIIKT |
|