Gene
| Gene Model ID | pfu_aug2.0_2210.1_02045 |
|---|---|
| Locus | scaffold2210.1 : 5086 ... 7692 : + |
| To GenomeBrowser | scaffold2210.1:5086..7692 |
| Genes list of scaffold | scaffold2210.1 |
| Synonym | pfu_aug1.0_7195.1_45598 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2210.1_02045.t1 | 1 | 1 | 7TM_GPCR_Srx | 32 | 238 | 5.2e-13 | 48.7 | 3.8e-16 | 8.1e-13 | 48.0 |
| pfu_aug2.0_2210.1_02045.t1 | 1 | 1 | 7tm_1 | 37 | 292 | 1.6e-33 | 115.9 | 8.8e-37 | 1.9e-33 | 115.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2210.1_02045.t1 | gi|676482113|ref|XP_009062593.1| | hypothetical protein LOTGIDRAFT_73649, partial [Lottia gigantea] | 7.00649e-43 |
| pfu_aug2.0_2210.1_02045.t1 | gi|676482239|ref|XP_009062634.1| | hypothetical protein LOTGIDRAFT_194810, partial [Lottia gigantea] | 1.0e-39 |
| pfu_aug2.0_2210.1_02045.t1 | gi|676422998|ref|XP_009044049.1| | hypothetical protein LOTGIDRAFT_73186, partial [Lottia gigantea] | 1.0e-37 |
| pfu_aug2.0_2210.1_02045.t1 | gi|743697996|ref|XP_010955565.1| | PREDICTED: LOW QUALITY PROTEIN: prostaglandin E2 receptor EP4 subtype [Camelus bactrianus] | 1.0e-36 |
| pfu_aug2.0_2210.1_02045.t1 | gi|555955255|ref|XP_005889786.1| | PREDICTED: prostaglandin E2 receptor EP4 subtype [Bos mutus] | 1.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_2210.1_02045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2210.1_02045.t1 atggaaaataccacagatttgaatcagcttattcttaacagatccacaactcaaaagattgatgaaaatattgtgatccc agctctcttgtatttatttggatccggtggaaatatacttgcaatagtacttttatttgtttcgtcaaagcgccacaaat ggaagccgttttatcgactcgtgtttgcgcttgctttaacggatttgacagggaactttttggtatatccattcataatg atgcgctatgcgtccgattttacgtacgaatatccaaattcagtttgtcaacatgttgctttcatgttctcgctctgctt cctgggatcggctttgcttgtcatgatgatgtcgtttgacagattcctagcaatcttgtttcctttcgtgtacaatacac ctaagaaaattctccggacacacattttcatcataatctgttggtcaatacccgcaattgtgtgcatcctacctctggcc ggaattggaagagtgaaaatattctacccgggctcttggtgttttattgactttacgagtcatgttggtcatgacgaagc tatagcatatatttacgccattcttggattgataattttcattttgacactacttttcaatgccgctgtcatttttgcta tttgtcatagaatgtatgttaaccggaaaaacttaggatcacagaaacgaataaaatcggacatttacgtaatttcattc ctacttgctatcgtcaccgtattcagcgtttgctggatgcccctcatgacttttataataaaaatcatcaacgatcccaa tccaaagacgggcaaacaggggctacttgtaattcgattggccatatcgaattcaaacatcgatccttggatctatattg tgttgcggaaggagaatttggagtttgttgaacggttattcaagcgatatgtgatttgcagtgaggaaccatcccaacct tcaagcactggtacctcaaagcaaggcaatataacccttgaacttagcacagagaacacatag |
|
Protein
| Protein ID | pfu_aug2.0_2210.1_02045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2210.1_02045.t1 MENTTDLNQLILNRSTTQKIDENIVIPALLYLFGSGGNILAIVLLFVSSKRHKWKPFYRLVFALALTDLTGNFLVYPFIM MRYASDFTYEYPNSVCQHVAFMFSLCFLGSALLVMMMSFDRFLAILFPFVYNTPKKILRTHIFIIICWSIPAIVCILPLA GIGRVKIFYPGSWCFIDFTSHVGHDEAIAYIYAILGLIIFILTLLFNAAVIFAICHRMYVNRKNLGSQKRIKSDIYVISF LLAIVTVFSVCWMPLMTFIIKIINDPNPKTGKQGLLVIRLAISNSNIDPWIYIVLRKENLEFVERLFKRYVICSEEPSQP SSTGTSKQGNITLELSTENT |
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