Gene
| Gene Model ID | pfu_aug2.0_2210.1_02048 |
|---|---|
| Locus | scaffold2210.1 : 90672 ... 107415 : - |
| To GenomeBrowser | scaffold2210.1:90672..107415 |
| Genes list of scaffold | scaffold2210.1 |
| Synonym | pfu_aug1.0_6661.1_45494 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2210.1_02048.t1 | 2 | 1 | Beta-Casp | 101 | 131 | 8.7e-10 | 38.6 | 1.9e-05 | 0.093 | 12.6 |
| pfu_aug2.0_2210.1_02048.t1 | 2 | 2 | Beta-Casp | 139 | 170 | 8.7e-10 | 38.6 | 5.7e-09 | 2.8e-05 | 24.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2210.1_02048.t1 | gi|383859338|ref|XP_003705152.1| | 0.0 | |
| pfu_aug2.0_2210.1_02048.t1 | gi|514703477|ref|XP_005008885.1| | PREDICTED: integrator complex subunit 11 isoform X2 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_2210.1_02048.t1 | gi|543747167|ref|XP_005514352.1| | PREDICTED: integrator complex subunit 11 isoform X2 [Columba livia] | 0.0 |
| pfu_aug2.0_2210.1_02048.t1 | gi|704234038|ref|XP_010157763.1| | PREDICTED: integrator complex subunit 11 isoform X2 [Eurypyga helias] | 0.0 |
| pfu_aug2.0_2210.1_02048.t1 | gi|723573941|ref|XP_010306912.1| | PREDICTED: integrator complex subunit 11 isoform X2 [Balearica regulorum gibbericeps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2210.1_02048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2210.1_02048.t1 atgactacatatgtggggagaagctgtattctgattaccattggagggaagaacattatgttggattgtgggatgcatat gggatataatgatgagggtgactataacatgacaccagaccgccatcttggagctgcctggatagataaatgtcggccag atcttctcatcacagagtcgacttacgccacaacgatacgtgattccaagaggtgtcgggagcgggacttccttaaaaag gtccatgactgtgtagagaaagggggcaaggtgttaatcccagtatttgctttgggccgtgcccaggagttgtgtatatt actagagtcgtactgggacagaatgaatctcaaagtgcctatttatttctcacttggtctcacagaaaaggcatttgaca gagcctacatagagaatccaggacccatggttgtatttgctactccagggatgctgcatgcaggattatcattacagata ttcaagaagtgggctccttttgatcagaatatgaaaatgcagatgattgacccaagtgaagctcttcaggaaatgggagt ggaggagcaccatctgagattcacatctaccgttattatagaggaggagggaccagccaatcagatggccgataaaatat tccaagttattcagagtaagctgaaggacttcccagcacactattcctctgacgggtctatttccatctccgattccgtt ctattacaagtgtcgggagaggaagatgaagccaagtctgtacttgtctcttggtctcatcagattatgggatttctgtg gaaactgttgtacaatgcactatcagtgacaaccaaggtgaatttctacaggacttgtgtcagatcgttaccagcaagta cagtgcctccctgtgtagaacctagttcacatgtgacaaatgatgaacatgtacatatatga |
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Protein
| Protein ID | pfu_aug2.0_2210.1_02048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2210.1_02048.t1 MTTYVGRSCILITIGGKNIMLDCGMHMGYNDEGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKK VHDCVEKGGKVLIPVFALGRAQELCILLESYWDRMNLKVPIYFSLGLTEKAFDRAYIENPGPMVVFATPGMLHAGLSLQI FKKWAPFDQNMKMQMIDPSEALQEMGVEEHHLRFTSTVIIEEEGPANQMADKIFQVIQSKLKDFPAHYSSDGSISISDSV LLQVSGEEDEAKSVLVSWSHQIMGFLWKLLYNALSVTTKVNFYRTCVRSLPASTVPPCVEPSSHVTNDEHVHI |
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