Gene
| Gene Model ID | pfu_aug2.0_2221.1_05458 |
|---|---|
| Locus | scaffold2221.1 : 86620 ... 87465 : - |
| To GenomeBrowser | scaffold2221.1:86620..87465 |
| Genes list of scaffold | scaffold2221.1 |
| Synonym | pfu_aug1.0_994.1_43872 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| basic helix-loop-helix transcription factor amos | GO:0046983 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2221.1_05458.t1 | 1 | 1 | HLH | 130 | 182 | 1.5e-17 | 63.0 | 2.2e-21 | 3.2e-17 | 61.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2221.1_05458.t1 | gi|91078386|ref|XP_974297.1| | PREDICTED: basic helix-loop-helix transcription factor amos [Tribolium castaneum] | 1.0e-26 |
| pfu_aug2.0_2221.1_05458.t1 | gi|241998264|ref|XP_002433775.1| | transcription factor, putative [Ixodes scapularis] | 2.0e-26 |
| pfu_aug2.0_2221.1_05458.t1 | gi|241998270|ref|XP_002433778.1| | transcription factor, putative [Ixodes scapularis] | 3.0e-26 |
| pfu_aug2.0_2221.1_05458.t1 | gi|391337426|ref|XP_003743070.1| | PREDICTED: protein lin-32-like [Metaseiulus occidentalis] | 3.0e-25 |
| pfu_aug2.0_2221.1_05458.t1 | gi|170029486|ref|XP_001842623.1| | conserved hypothetical protein [Culex quinquefasciatus] | 4.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_2221.1_05458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2221.1_05458.t1 atgctgcagaacacggacgctttagatagtatacagagtcgggagctcgtaacaaacaatgtgtatccacaaggagacag tagctttcagcaactgaccatagctcttggtcatctgtccaacatcccagagaatgaagacctggtcagttttgggtctc ctaaaagttacctggccagtgacagtgactgtactccgatgtccacaccatgcactcctctcagtccaggatatactaac aatggaaaccggtttctgtttccaggagagcgcggttatcaaatacaaaataattcatcatcaactgacaacagtgctac cgctaccaaatcacataaaatcaaacgccggagtacggcgccagcgagtaaagacgtaatgaaaagacgacggttagcag caaacgcccgagaaagacgacgcatggaaagtctgaacgttgcttttgaccgtcttcgtgcagtgattccatccattggt gaaaaccagaaactgtcaaagtacgaaactctgcaaatggcgcagagctatattggcgcactacaagaactgcttgtgaa ggactaa |
|
Protein
| Protein ID | pfu_aug2.0_2221.1_05458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2221.1_05458.t1 MLQNTDALDSIQSRELVTNNVYPQGDSSFQQLTIALGHLSNIPENEDLVSFGSPKSYLASDSDCTPMSTPCTPLSPGYTN NGNRFLFPGERGYQIQNNSSSTDNSATATKSHKIKRRSTAPASKDVMKRRRLAANARERRRMESLNVAFDRLRAVIPSIG ENQKLSKYETLQMAQSYIGALQELLVKD |
|