Gene
| Gene Model ID | pfu_aug2.0_223.1_10467 |
|---|---|
| Locus | scaffold223.1 : 203804 ... 206451 : - |
| To GenomeBrowser | scaffold223.1:203804..206451 |
| Genes list of scaffold | scaffold223.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_223.1_10467.t1 | 3 | 1 | RVT_1 | 11 | 137 | 2.1e-22 | 79.5 | 3.3e-20 | 6.2e-17 | 61.6 |
| pfu_aug2.0_223.1_10467.t1 | 3 | 2 | RVT_1 | 202 | 240 | 2.1e-22 | 79.5 | 6.9e-06 | 0.013 | 14.8 |
| pfu_aug2.0_223.1_10467.t1 | 2 | 1 | Dam | 265 | 331 | 2.6e-07 | 30.2 | 1.3 | 2400.0 | -2.3 |
| pfu_aug2.0_223.1_10467.t1 | 2 | 2 | Dam | 473 | 571 | 2.6e-07 | 30.2 | 2.0e-10 | 3.7e-07 | 29.7 |
| pfu_aug2.0_223.1_10467.t1 | 3 | 3 | RVT_1 | 600 | 617 | 2.1e-22 | 79.5 | 3.4 | 6300.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_223.1_10467.t1 | gi|751235835|ref|XP_011171717.1| | PREDICTED: uncharacterized protein LOC105204364 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_223.1_10467.t1 | gi|665815167|ref|XP_008556227.1| | PREDICTED: uncharacterized protein LOC103577389 [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_223.1_10467.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_223.1_10467.t1 atggaagggatacatatgttaaaggatgtaatatccccaaacgattggctagcaaaactagacctgaaggatgcatactt tacagtcccaatagatcagagtcatcagaaatatctatgtttcctttgggaaggtcagtactttcagtttcagtgccttg ccttcggactagcgagtgcgcctcgagtgtttaccaaaataatgaaaccagttgtttcctatctccgcagacagggagtt cgcatgataatttatttggacgacatgctcttcctaaatcaaactcaggaaggcctaatgacagacctaaaactggcaga aaaaacactgacacagttaggttttgtaatcaaccaggaaaaatcagaattgatcccaactcaacaaatagaattcttag gttatcagataaactcactgacaatgtccctgtctctgccaaagtcaaagataacaaagattttgaatcagtgtcaaaaa cttgtttgtcaagattggataactgtaagagaactggcaagtcttctaggcaaatttacagactcaattcaagcattctt ccaggcccctttgcattatcgagttctncaaactcaggaaggcctaatgacagacctaaaactggcagaaaaaacactga cacagttaggttttgtaatcaaccaggaaaaatcagaattgatcccaactcaacaaatagaattcttaggttatcagata aactcactgacaatgtccctgtctctgccaaagtcaaagataacaaagattttgaatcagtgtcaaaaacttgtttgtca agattggataactgtaagagaactggcaagtcttctaggcaaatttacagactcaattcaagcattcttccaggcccctt tgcattatcgagttctccaaaaagtgaagaatgtgggtcttcgtcaaaatcagggatacgattcgaaaataatgttaaat ctcgaagcaaaacaggaaatcaaatggtggctagcacatttagagtctttcaatgggaaaacaattctcactcctgtacc agaaatggtgatagaaacagatgcctcaaagcagggatggggggcctattacaacaacacgacaataggaggcctatggt caatagaagaacaacaaaaacacataaatgcactggaactgatggcaggcatgtttgcaatcaaagcatttgcaaaagga aaaagcaatctaaacattctactaaaaatggacaatcgcagctcagttgcttacatcaatcggatggggggtacaaaatc cgacaccctttcagatttggcaaaagagatttggcaatgggctctttcaaaaaatataaacatctcggcagtacacatag caggcttaacgaatataagggcagatcatgcatctcggcattgggaagatccaagcgattgggctttaagaaaagacctg ttcagagagctgttgagaatttttggtccattcgaaatagatctgtttgccaacaggttgaacagacaactgccagtcta ttgcagttggaaaccagatccggaggctgtagggacggatgcgttcacgatggactggactcaaatgaagcgcccttact tatttcccccgttctgcctgataggcaaatgtctggccaaggcacgcatgcaaatgacgacaatgttgatagtaacccca gtatggcagagccaaccttggtatccaacaatcctgcggatgtgtatagccagtccgattctactcccaccatgccagaa tctattgacgtccccacagggggaaccccatccactgacggtgaacaacaacctacagctggccgcatggctagtatcag gggatcttatggcagtcaaggcttttcacaaagagttacatcccttctattatcctcttggagttctggaacaaacatca gttacaatagcgcctggagtaaatggaatagctggtgcagtgaacgggcagttaatccacttcatgcccctttggccgtt atcttag |
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Protein
| Protein ID | pfu_aug2.0_223.1_10467.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_223.1_10467.t1 MEGIHMLKDVISPNDWLAKLDLKDAYFTVPIDQSHQKYLCFLWEGQYFQFQCLAFGLASAPRVFTKIMKPVVSYLRRQGV RMIIYLDDMLFLNQTQEGLMTDLKLAEKTLTQLGFVINQEKSELIPTQQIEFLGYQINSLTMSLSLPKSKITKILNQCQK LVCQDWITVRELASLLGKFTDSIQAFFQAPLHYRVXQTQEGLMTDLKLAEKTLTQLGFVINQEKSELIPTQQIEFLGYQI NSLTMSLSLPKSKITKILNQCQKLVCQDWITVRELASLLGKFTDSIQAFFQAPLHYRVLQKVKNVGLRQNQGYDSKIMLN LEAKQEIKWWLAHLESFNGKTILTPVPEMVIETDASKQGWGAYYNNTTIGGLWSIEEQQKHINALELMAGMFAIKAFAKG KSNLNILLKMDNRSSVAYINRMGGTKSDTLSDLAKEIWQWALSKNINISAVHIAGLTNIRADHASRHWEDPSDWALRKDL FRELLRIFGPFEIDLFANRLNRQLPVYCSWKPDPEAVGTDAFTMDWTQMKRPYLFPPFCLIGKCLAKARMQMTTMLIVTP VWQSQPWYPTILRMCIASPILLPPCQNLLTSPQGEPHPLTVNNNLQLAAWLVSGDLMAVKAFHKELHPFYYPLGVLEQTS VTIAPGVNGIAGAVNGQLIHFMPLWPLS |
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