Gene
| Gene Model ID | pfu_aug2.0_223.1_10469 |
|---|---|
| Locus | scaffold223.1 : 339272 ... 347687 : + |
| To GenomeBrowser | scaffold223.1:339272..347687 |
| Genes list of scaffold | scaffold223.1 |
| Synonym | pfu_aug1.0_10179.1_10085 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| muscarinic acetylcholine receptor gar-3 | GO:0005887 GO:0007213 GO:0016907 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_223.1_10469.t1 | 1 | 1 | 7tm_1 | 1 | 480 | 4.3e-24 | 85.0 | 6.9e-27 | 3.4e-23 | 82.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_223.1_10469.t1 | gi|676489184|ref|XP_009064855.1| | hypothetical protein LOTGIDRAFT_132084 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_223.1_10469.t1 | gi|524917343|ref|XP_005113431.1| | PREDICTED: muscarinic acetylcholine receptor M3-like [Aplysia californica] | 4.00001e-40 |
| pfu_aug2.0_223.1_10469.t1 | gi|662212058|ref|XP_008479741.1| | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103516547, partial [Diaphorina citri] | 3.0e-35 |
| pfu_aug2.0_223.1_10469.t1 | gi|675879582|ref|XP_009025320.1| | hypothetical protein HELRODRAFT_147204, partial [Helobdella robusta] | 4.0e-35 |
| pfu_aug2.0_223.1_10469.t1 | gi|71986246|ref|NP_001022597.1| | GAR-2, isoform e [Caenorhabditis elegans] | 2.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_223.1_10469.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_223.1_10469.t1 atgctagccatgtcgtggattattcctacgcttattttcttcacctcagtcattggctggcagtacttcgtcggcgaaag gtcagtaaaaccgtacgaatgtgaggtacagtttatgagtgatccgttgtttacattatttttaactctgggatactact ggactttccttttcatcatgatcggactttacgctggaatttaccgtgtggcactttcactacaaaagaaagcagaagcg aaacagaagaaaattacgactgcgatggagttggctggcgacaggggcaaccaggctaaaccgccccctaccgtgggggc agcgaataagaatagtaagaaaaggattgagaataataatgccaggaacctgcgcggtatagaatcgaccacgtttacga agaatgcccctgctgaggaggacaggtccagctcacctgcattcgcctctgatgaggaaaatagtagttccggtaacgca tgcgcaacaagcaaaactccattgaattacagaaatgatcttgatgacgacgatgacgagcagacgtgctttgtcaacag cgcagtacaaacggatacgacatatcggccatctttaaaaggaatgctgggaatgtccttcaatcacgtgtcaaaaatag ccctgtcgatcagtggtactagtggattagagcagagcagtgtagatagtccagagaaaaatgttgttatagaaaacaca agcaatgacaataagtatgtcacatcctttgataagattgacaatgaggatgataacttttccgaaaagtatccaaaacc caccgataaacttttggagaacgatatcttacaagggtgtaagtacattgacgaggatagctttaaaacattgtcagcat ccgaaaatatcaagcttcttcctgacttggatatatcacgtgacacgtatgtgtcatcggacgataaactttcgccgatt tggaagaaacgcgcaggtcgttgtgtactcctaccggaggaatcgaccatgtgtacaagttcaaccattatagacgagga aatagccccggataacaacgagcaggagacaacaccacttccggtaaacggaagcactccgactgcgcaatgcgataaca aacacgtcgcggcagtgaaaaactcgaactctgacaaaaaatcattcggaagtcctcttcatgcactcgtcaaatccatg cgcgagaagcagaagaagaggaatagaagggccaaagcaaattccaaatctgaaaatagagcgcgaaaagccttacgaac aattacatttattcttggtgcatacctgatgtgttggacaccgtatcacgtgatgattctaattataggactatgtcaga catgcgtgtatccagtacagatttatcatttctcgtactggttatgctacttaaacagtcccataaatccattctgctac gctttagccaatcaacaatttaaaaggacattcactaggattttgaaattagattgtcatagaacttaa |
|
Protein
| Protein ID | pfu_aug2.0_223.1_10469.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_223.1_10469.t1 MLAMSWIIPTLIFFTSVIGWQYFVGERSVKPYECEVQFMSDPLFTLFLTLGYYWTFLFIMIGLYAGIYRVALSLQKKAEA KQKKITTAMELAGDRGNQAKPPPTVGAANKNSKKRIENNNARNLRGIESTTFTKNAPAEEDRSSSPAFASDEENSSSGNA CATSKTPLNYRNDLDDDDDEQTCFVNSAVQTDTTYRPSLKGMLGMSFNHVSKIALSISGTSGLEQSSVDSPEKNVVIENT SNDNKYVTSFDKIDNEDDNFSEKYPKPTDKLLENDILQGCKYIDEDSFKTLSASENIKLLPDLDISRDTYVSSDDKLSPI WKKRAGRCVLLPEESTMCTSSTIIDEEIAPDNNEQETTPLPVNGSTPTAQCDNKHVAAVKNSNSDKKSFGSPLHALVKSM REKQKKRNRRAKANSKSENRARKALRTITFILGAYLMCWTPYHVMILIIGLCQTCVYPVQIYHFSYWLCYLNSPINPFCY ALANQQFKRTFTRILKLDCHRT |
|