Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_223.1_10470
Locus scaffold223.1 : 353355 ... 409869 : -
To GenomeBrowser scaffold223.1:353355..409869
Genes list of scaffold scaffold223.1
Synonym pfu_aug1.0_3637.1_59299

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_223.1_10470.t1 gi|676433673|ref|XP_009046977.1| hypothetical protein LOTGIDRAFT_199790 [Lottia gigantea] 0.0
pfu_aug2.0_223.1_10470.t1 gi|585657589|ref|XP_006815867.1| PREDICTED: WD repeat-containing protein 60-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_223.1_10470.t1 gi|699604478|ref|XP_009871250.1| PREDICTED: WD repeat-containing protein 60, partial [Apaloderma vittatum] 0.0
pfu_aug2.0_223.1_10470.t1 gi|548340558|ref|XP_005722842.1| PREDICTED: WD repeat-containing protein 60-like isoform X4 [Pundamilia nyererei] 0.0
pfu_aug2.0_223.1_10470.t1 gi|554802963|ref|XP_005912455.1| PREDICTED: WD repeat-containing protein 60-like isoform X3 [Haplochromis burtoni] 0.0

Transcript
Transcript IDpfu_aug2.0_223.1_10470.t1
Definition-
>pfu_aug2.0_223.1_10470.t1
aaggatgacataagaaaagaacgagaaaagttaaaacgggagagacgagaaagggacggcagagatgaagaagaaataga
taccagaaaaagggagggacacagacgacgggaggacgatgatcgcaaagaaaggaggagacacgatgaagataaacgac
aaaataaagatgacgatcgtcgacgtaaagacgaggaaaggaggtctcacagaactgataatgatgaagaagaaagagag
agacaaagaagggaaaggagagaaaagagagagggaaaaagttccagggatacaaaagatcgagaacagagtaagaggaa
agaagaggaagaaagtcgatctcaaaagcgtcatcgtgacactgatgacaaacgttcaagggaccatgatgacagacgga
gaagaagagatgaagaagatgaagatgagaaggaaagaagaagacaggaagaaagggaacgaaggaggaaagaaaaggaa
ggagataaacgcaacaaggacagggatagagatcgagacagagatgatagaaggcaaactaatggagaaagtgacgacag
gcacagaagacacaaagatcaggacagggatcaaagaagagaaaagaaggacagacacagggatgaagaagatgagagag
acagaagacgcgacaggagggatcgtgatgacgatgatgaggacgaaagagaaagacaaaggagggaaagaagagaaaaa
cgggaagggaaagacaaagataagagtagaaagacaaaagatgaggaggaagaagaaagaagaagacgaaaggacaaaga
aagaagagagagggaagaaagggaaagacgagaaagagaagagagggagagacaagaaaggcagaagtcccatgcacagg
aggacaatgactacaatgattatgaagatgattttgaggataatgaagttgatgaggtgctacgagccttagaccaggag
aacgaacgactactgaccgagtcacggcaggatagatatgacacgcctgaaagcaatgaataccgtagaggaagatacag
agatgacgatgaagatgattataatgatgatagaggaggtaacggcacgtcacatcaaacacctagcgcctcatcctcgg
gcctcataaatttctccggagccaaaaaacaagtgatgagtcgcaaggcaaacagtaagatggaaaaacgtgccgcagat
cttctacagatgttggaattagatgtcgctcgatacgacatgtttgaccttcctcccgtcaaagagtacgagctgtatat
cagaaattttggacgtacagacgctcagcaggcgtatgtccagacaaatgacgacaacattgatagagacgtacagacgg
aggaaatcgacacacgttcaaaatggacacagcatcccgctcatgacagcacaggctgtggacgaggtgatgggaagaag
gatttagatgaagaagaagtagaacttcagcagagcaaagtttacgatctgtcacggctcaacaagttcgttgagcaagc
tggacaggttatagccattttgttagaggaagaaagagaaatgtcaaacagccatgaatcgcctggagaaaatagatcca
acatggcagtcagtgaaggattctcggaacttaacctgctgaatttacttaaagatcgttacgtagaatttacacacttc
tctccgtcccagccaaaccatcttcttacagtctatagtaaaccaacacagatggacgaatcaaatcctgtatataataa
aggcatgatctgtgtgtggaataccaacgatccttcttatccacaaaggattttggcttgtgaatctcagcctgtgtgtt
gctgctttagtccctataaggctacactagtatttgctggaatggtagatggatctgtgtgtgcatgggacctgagagag
ccaccttccctccatcaaactctccagtaccaggatactcaacatatagtacgattccctacctataatacagctggtgt
gatggatgctgaaaatcaccatagtcctataactacgttaaaccctgtcgtctcctcgacagatagggagcctgatactt
cagacagtactgatgagtcattgggattgtcttttcaactagtttcatgtgaagaacaaggtgttatcaatttctgggtt
gttgctgagatatcaagcccagacatggctgggtcggaggttgatttaggactttcacctggaggccgagttaaactcgt
cagaagttcagttatctcccttcaaagccctgttagtaaagggagtggtacagtgagatcgtttgagttacagctttccc
cacaagatcccaaccatttctatgttggaacagaagggggatacattcttcacggagtcaggtttggatctagggctttt
cccaggaccttctctgctattacagatgcacctgcttatgttcagacgttagatttctctccattcggccatccgtgctt
tttggccagcagtgctgatggagccgtccatttgttcaactccaagacagattctcctgtagtgacatggccgtcaaaga
cttggggcgggagttttgttcgttgcgtacgatggtcacgtactcgaccgtgtgttttctacgtgcttgacgatgcttca
cacctgtatacgtttgacttcctggagggagacgttttacctgcaaaaatcgacaccctgtcatcatcgaacaaggccgt
gagcatgagtttgactgaccatagactacaggatggcacagagggccacagctccaggctacctcaaatggtggtgagtt
ttgaaaatggctcagttgaagtccacacaatatcaaaggaatacagagagctacagacgttagaagatgaatttataccg
tcatacctggccagattctga

Protein
Protein IDpfu_aug2.0_223.1_10470.t1
Definition-
>pfu_aug2.0_223.1_10470.t1
KDDIRKEREKLKRERRERDGRDEEEIDTRKREGHRRREDDDRKERRRHDEDKRQNKDDDRRRKDEERRSHRTDNDEEERE
RQRRERREKREGKSSRDTKDREQSKRKEEEESRSQKRHRDTDDKRSRDHDDRRRRRDEEDEDEKERRRQEERERRRKEKE
GDKRNKDRDRDRDRDDRRQTNGESDDRHRRHKDQDRDQRREKKDRHRDEEDERDRRRDRRDRDDDDEDERERQRRERREK
REGKDKDKSRKTKDEEEEERRRRKDKERREREERERREREERERQERQKSHAQEDNDYNDYEDDFEDNEVDEVLRALDQE
NERLLTESRQDRYDTPESNEYRRGRYRDDDEDDYNDDRGGNGTSHQTPSASSSGLINFSGAKKQVMSRKANSKMEKRAAD
LLQMLELDVARYDMFDLPPVKEYELYIRNFGRTDAQQAYVQTNDDNIDRDVQTEEIDTRSKWTQHPAHDSTGCGRGDGKK
DLDEEEVELQQSKVYDLSRLNKFVEQAGQVIAILLEEEREMSNSHESPGENRSNMAVSEGFSELNLLNLLKDRYVEFTHF
SPSQPNHLLTVYSKPTQMDESNPVYNKGMICVWNTNDPSYPQRILACESQPVCCCFSPYKATLVFAGMVDGSVCAWDLRE
PPSLHQTLQYQDTQHIVRFPTYNTAGVMDAENHHSPITTLNPVVSSTDREPDTSDSTDESLGLSFQLVSCEEQGVINFWV
VAEISSPDMAGSEVDLGLSPGGRVKLVRSSVISLQSPVSKGSGTVRSFELQLSPQDPNHFYVGTEGGYILHGVRFGSRAF
PRTFSAITDAPAYVQTLDFSPFGHPCFLASSADGAVHLFNSKTDSPVVTWPSKTWGGSFVRCVRWSRTRPCVFYVLDDAS
HLYTFDFLEGDVLPAKIDTLSSSNKAVSMSLTDHRLQDGTEGHSSRLPQMVVSFENGSVEVHTISKEYRELQTLEDEFIP
SYLARF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495