Gene
| Gene Model ID | pfu_aug2.0_224.1_13818 |
|---|---|
| Locus | scaffold224.1 : 38286 ... 45185 : + |
| To GenomeBrowser | scaffold224.1:38286..45185 |
| Genes list of scaffold | scaffold224.1 |
| Synonym | pfu_aug1.0_25206.1_11676 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hairy and enhancer of split-related protein helt | GO:0006355 GO:0007399 GO:0044424 GO:0046983 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_224.1_13818.t1 | 2 | 1 | HLH | 12 | 65 | 3.0e-19 | 68.4 | 7.9e-23 | 5.9e-19 | 67.5 |
| pfu_aug2.0_224.1_13818.t1 | 2 | 1 | Hairy_orange | 27 | 34 | 4.4e-08 | 32.7 | 0.72 | 5300.0 | -2.8 |
| pfu_aug2.0_224.1_13818.t1 | 2 | 2 | Hairy_orange | 91 | 130 | 4.4e-08 | 32.7 | 1.8e-11 | 1.4e-07 | 31.1 |
| pfu_aug2.0_224.1_13818.t1 | 2 | 2 | HLH | 96 | 104 | 3.0e-19 | 68.4 | 1.3 | 9600.0 | -3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_224.1_13818.t1 | gi|269785273|ref|NP_001161564.1| | hey-like transcription factor [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_224.1_13818.t1 | gi|676428690|ref|XP_009045357.1| | hypothetical protein LOTGIDRAFT_97309, partial [Lottia gigantea] | 9.99967e-42 |
| pfu_aug2.0_224.1_13818.t1 | gi|196010822|ref|XP_002115275.1| | hypothetical protein TRIADDRAFT_59292 [Trichoplax adhaerens] | 2.0e-39 |
| pfu_aug2.0_224.1_13818.t1 | gi|488566416|ref|XP_004472868.1| | 3.0e-32 | |
| pfu_aug2.0_224.1_13818.t1 | gi|512816285|ref|XP_002934312.2| | PREDICTED: hairy and enhancer of split-related protein HELT [Xenopus (Silurana) tropicalis] | 5.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_224.1_13818.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13818.t1 atggaagtaaaagagagagataacatggaacatgcctctcataaggtgatagaaaaacgaagaagagataggattaacaa ctgtctgtcagagttaagtcaaacagtaccagcagctttctcaaaacagtcctctggaaagttggaaaaggccgaaattt tggaaatgaccgtagaatatctgagagcaattcaagcaaccgagattggtttaagatttgaaaatggagactggtttagc acagacatatggacggacttcatgcatcactataaggtcggctacaacgactgcatccgggaaatccagaggttcatgac tgacgtggagggtgtcaacgcagatgacgatagatgcatccggttaatttcctatttgcagacgagattcagaccagatt cttctatcagtggtggcgctgcttaccgcgaggcgctagaacgtctggtaaattctcaaagcagacgactaacgagccga aaccaacacatcagcagaagtgatcacttgatttcacccgggccagtcgtgcccagtttatcaaggtttagtccgtaccc tttgcccaatacgatgagcagtataagtagaaacatgcagccaagactgacaaacacagatatgaggagtacagccacga tgaccccgttttcaagaccaatattcggacattctgtacataacagcccggacataaaaatcaacaaatttttcacatga |
|
Protein
| Protein ID | pfu_aug2.0_224.1_13818.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13818.t1 MEVKERDNMEHASHKVIEKRRRDRINNCLSELSQTVPAAFSKQSSGKLEKAEILEMTVEYLRAIQATEIGLRFENGDWFS TDIWTDFMHHYKVGYNDCIREIQRFMTDVEGVNADDDRCIRLISYLQTRFRPDSSISGGAAYREALERLVNSQSRRLTSR NQHISRSDHLISPGPVVPSLSRFSPYPLPNTMSSISRNMQPRLTNTDMRSTATMTPFSRPIFGHSVHNSPDIKINKFFT |
|