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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_224.1_13824
Locus scaffold224.1 : 138676 ... 144831 : +
To GenomeBrowser scaffold224.1:138676..144831
Genes list of scaffold scaffold224.1
Synonym pfu_aug1.0_95962.1_06230

Manual annotation
Annotation by Blast2GO
Annotation GO
nadh dehydrogenase GO:0016491

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_224.1_13824.t1 gi|524911939|ref|XP_005110827.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial-like [Aplysia californica] 9.0e-31
pfu_aug2.0_224.1_13824.t1 gi|170055789|ref|XP_001863738.1| NADH dehydrogenase iron-sulfur protein 3, mitochondrial [Culex quinquefasciatus] 6.0e-27
pfu_aug2.0_224.1_13824.t1 gi|383861194|ref|XP_003706071.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial [Megachile rotundata] 3.0e-26
pfu_aug2.0_224.1_13824.t1 gi|557775226|ref|XP_005187259.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial [Musca domestica] 2.0e-25
pfu_aug2.0_224.1_13824.t1 gi|58388728|ref|XP_316497.2| AGAP006456-PA [Anopheles gambiae str. PEST] 8.0e-25

Transcript
Transcript IDpfu_aug2.0_224.1_13824.t1
Definition-
>pfu_aug2.0_224.1_13824.t1
atggcctctcgcttggtcaggttgattcggcctgtaacacagatttccaggagtaacgctatcaacaaagttgccaggcc
tataacagctctacctcagctgagatgtcagtcaacagaggttgagaaaaaaggaggaccatgtatgagacctccagtaa
atcccttggtcaaagagaggctgtcggactttggtgtctacgtggcggagaatctacagaagtttgtacagaaagtcaga
atcgctaacggagatgaattagagatcctcgttcatcctgacggcattaaaacaacgctcctgttcctgaagagtcatca
tacctgtgaattccttaacattgttgatattgcctgtgtagatgttccaacgagaagatacagatttgagcttcggtatg
atgatgaagtagaaaggattgttatagagcctgtagaattaacgcaggagttccgtaagtttgagtacagtacaccctgg
gaatcgttcccgaacttccgagaagcagatgtgaaaagtgaagaaatacccatcaaacagattgagaaagctgccgacga
gaaaacagataaataa

Protein
Protein IDpfu_aug2.0_224.1_13824.t1
Definition-
>pfu_aug2.0_224.1_13824.t1
MASRLVRLIRPVTQISRSNAINKVARPITALPQLRCQSTEVEKKGGPCMRPPVNPLVKERLSDFGVYVAENLQKFVQKVR
IANGDELEILVHPDGIKTTLLFLKSHHTCEFLNIVDIACVDVPTRRYRFELRYDDEVERIVIEPVELTQEFRKFEYSTPW
ESFPNFREADVKSEEIPIKQIEKAADEKTDK

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