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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_224.1_13826
Locus scaffold224.1 : 159813 ... 174015 : -
To GenomeBrowser scaffold224.1:159813..174015
Genes list of scaffold scaffold224.1
Synonym pfu_aug1.0_22914.1_33304

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_224.1_13826.t1 gi|383848735|ref|XP_003700003.1| 5.0e-32
pfu_aug2.0_224.1_13826.t1 gi|340719076|ref|XP_003397983.1| PREDICTED: uncharacterized protein LOC100650208 [Bombus terrestris] 2.0e-31
pfu_aug2.0_224.1_13826.t1 gi|350396158|ref|XP_003484461.1| PREDICTED: uncharacterized protein LOC100749106 [Bombus impatiens] 9.0e-30
pfu_aug2.0_224.1_13826.t1 gi|524909994|ref|XP_005109888.1| PREDICTED: serologically defined colon cancer antigen 3 homolog isoform X2 [Aplysia californica] 1.0e-27
pfu_aug2.0_224.1_13826.t1 gi|524909992|ref|XP_005109887.1| PREDICTED: serologically defined colon cancer antigen 3 homolog isoform X1 [Aplysia californica] 1.0e-27

Transcript
Transcript IDpfu_aug2.0_224.1_13826.t1
Definition-
>pfu_aug2.0_224.1_13826.t1
atggctgagggcggagggagcgacagcgatgaaaatccattttcattcaaaaactttgtacagagtaaagatgacaataa
gccaaaaagcctcagaaaagagaaaatcgatgttttatctaacgactccaatctacctgatataagtgtgtcgtcgacaa
gaaaagagaaaaaaggacaggaaaaaggcaaacagaacaagaaaacaaaagatcaaaatccattttctttcaagaagttt
ttggagagttcatcagacaaatcttcgtccaaaaagacagttcgatcagccagagattcatcccataaatcttccgatta
ttctaccgtgttacctgattttgtacaggaccatagtacagatagacttcattcttcatcacgagaaagctctacccctc
tgtatggattatctggaggtcaaaggtcaaggtcatctgctgtgaatgatctaccggactttgatttaaatgacggacaa
atttcgtcgaattcacccgtcaacgacttacctgaatttgtatcggaaaatgacaccagacacattgagagagtatttcc
ggatgtaggtttgccatctgatgatgtgcggcatatacgaacaaataatgatgttgtagaattgccagactttgcgttat
cttgtgttggtaacaccagatcgggtagttttcattcagatacaaatggtgctgtgtcagacccggatgatgtagatttc
tcattggttcaaagttcagcaggagcaaaaattaaaccttcagatagacctggttcgtctcaagccttgccagatttttt
gtcagacggagttcataaaaatactgaacatttttccgatagtgactttctctcacattcttcagacaacacaatacgta
atgggcacctgaaccaagatgattttagtagcgttgcccaggaaaataggaggttaagagaggaagtaagcagactccaa
agagaacttgatcaagcaaaccgagagatagaagctgaaactctaaggaaacataagatggtgagagatatggaagttat
tcagaaaaaggaagcagaggaaacggcagcgttagagagaatggtacaacaagtagaggctaatctatctactactacac
aacgtgccgtagcagcggaaaataccgtgaccaaactccagtcagaagtcaaatcactgcagaaccaggtcagtaggtta
aggtcagaaaacgaagccttacaggcaggggaccatgtagccgaacaaaacttaaagcagcttttatcgggagtggagaa
cctgaagattcttgcccaagtcctcggtactatagacaaattatctgaacaaaaagaagattctgatggtaaaacttga

Protein
Protein IDpfu_aug2.0_224.1_13826.t1
Definition-
>pfu_aug2.0_224.1_13826.t1
MAEGGGSDSDENPFSFKNFVQSKDDNKPKSLRKEKIDVLSNDSNLPDISVSSTRKEKKGQEKGKQNKKTKDQNPFSFKKF
LESSSDKSSSKKTVRSARDSSHKSSDYSTVLPDFVQDHSTDRLHSSSRESSTPLYGLSGGQRSRSSAVNDLPDFDLNDGQ
ISSNSPVNDLPEFVSENDTRHIERVFPDVGLPSDDVRHIRTNNDVVELPDFALSCVGNTRSGSFHSDTNGAVSDPDDVDF
SLVQSSAGAKIKPSDRPGSSQALPDFLSDGVHKNTEHFSDSDFLSHSSDNTIRNGHLNQDDFSSVAQENRRLREEVSRLQ
RELDQANREIEAETLRKHKMVRDMEVIQKKEAEETAALERMVQQVEANLSTTTQRAVAAENTVTKLQSEVKSLQNQVSRL
RSENEALQAGDHVAEQNLKQLLSGVENLKILAQVLGTIDKLSEQKEDSDGKT

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