Gene
| Gene Model ID | pfu_aug2.0_224.1_13828 |
|---|---|
| Locus | scaffold224.1 : 202963 ... 224285 : + |
| To GenomeBrowser | scaffold224.1:202963..224285 |
| Genes list of scaffold | scaffold224.1 |
| Synonym | pfu_aug1.0_16264.1_03691 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_224.1_13828.t1 | 1 | 1 | PH | 123 | 225 | 7.4e-10 | 38.9 | 2.9e-13 | 1.5e-09 | 38.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_224.1_13828.t1 | gi|524886389|ref|XP_005099791.1| | PREDICTED: src kinase-associated phosphoprotein 2-like [Aplysia californica] | 4.0e-36 |
| pfu_aug2.0_224.1_13828.t1 | gi|573896759|ref|XP_006636118.1| | PREDICTED: src kinase-associated phosphoprotein 2-like isoform X2 [Lepisosteus oculatus] | 3.0e-27 |
| pfu_aug2.0_224.1_13828.t1 | gi|573896757|ref|XP_006636117.1| | PREDICTED: src kinase-associated phosphoprotein 2-like isoform X1 [Lepisosteus oculatus] | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_224.1_13828.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13828.t1 atgacttgctataccccggtgtggtcagggaccctggatacgtacctgattctgagatataacaaaaggttcacagaagg ctatccagaggttgagaaattctttgttgagacaatcaagaaagagaagttatcaaagtctgccagtgaccacaagcagt ccatccttgataaaatcttcaaaatcagagaggagtaccccgcactatctaaggcagaaaaggaggaaaccaaatctaaa ccagatttggacaagagtttttccgatgagtcgtcaagaactggagggagtaactatgatgataatgacgagtatgctga ctcaaacattcccgtgatagcagcaagtgatattaagtacccactcattgaaggtttcctggagaaaaaacaaaagagag ggacgttatttggtgctccaagacttcagaagcgatggtgtgctataaaagccagtacgatgtactactacgagagtcag aaggagaagaaacagcacggtgctttctacctgaatggttacagctttgaactggcaccagacgtggtagacaaaaagga cgcatccaaaaaagacttgagcttccaattagtttctgtaggcaaaaggacttaccagtttgtagctctgaacaaggatg accttgacaaatggaaggaggccatacagaaggcagcttgtgtagaagttggaggggaggatgaagcagatgacgtatat gagcctgtggaggaagacactaccgaggttccagagccgatagaggaggatatttatgaggcgtgtggagacgaggtgga tccaggtggggaggtctatgatgatgccacgtcagccccggccaatcaagtcgaagacgagcctgatgaagtatacgatg actgcgccaatacaaatacgacaaatacatcaaattcaacatcgaaatctctacctccaccccctatcccaccggcaaaa agcttgccccctaccccaccagcaaagggagggccccctacgccaccagcgaaaggagtgccaggaaggagagctgtacc tcctccacccacccaagggcttcctgaccttcctgacctcccttctgcacccccatccattccttcaggtagacatctgc cagatttaccgctacctcccgttccagggaaaaaggaggagaaaaagccgattatacacccggaccaagactacgaaaat aaatattacggaaagtatgactgtcaggccgatgaanctgttttaaagtag |
|
Protein
| Protein ID | pfu_aug2.0_224.1_13828.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13828.t1 MTCYTPVWSGTLDTYLILRYNKRFTEGYPEVEKFFVETIKKEKLSKSASDHKQSILDKIFKIREEYPALSKAEKEETKSK PDLDKSFSDESSRTGGSNYDDNDEYADSNIPVIAASDIKYPLIEGFLEKKQKRGTLFGAPRLQKRWCAIKASTMYYYESQ KEKKQHGAFYLNGYSFELAPDVVDKKDASKKDLSFQLVSVGKRTYQFVALNKDDLDKWKEAIQKAACVEVGGEDEADDVY EPVEEDTTEVPEPIEEDIYEACGDEVDPGGEVYDDATSAPANQVEDEPDEVYDDCANTNTTNTSNSTSKSLPPPPIPPAK SLPPTPPAKGGPPTPPAKGVPGRRAVPPPPTQGLPDLPDLPSAPPSIPSGRHLPDLPLPPVPGKKEEKKPIIHPDQDYEN KYYGKYDCQADEXVLK |
|