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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_224.1_13832
Locus scaffold224.1 : 319254 ... 346832 : -
To GenomeBrowser scaffold224.1:319254..346832
Genes list of scaffold scaffold224.1
Synonym pfu_aug1.0_45233.1_41352

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_224.1_13832.t1 8 1 Ank_2 221 304 0.0 200.9 4.4e-14 1.1e-10 41.7
pfu_aug2.0_224.1_13832.t1 8 1 Ank_4 241 296 1.4013e-45 152.7 5.2e-09 1.3e-05 25.5
pfu_aug2.0_224.1_13832.t1 13 1 Ank 242 273 0.0 177.8 0.002 4.9 7.1
pfu_aug2.0_224.1_13832.t1 10 1 Ank_5 242 268 0.0 153.7 0.17 410.0 1.4
pfu_aug2.0_224.1_13832.t1 13 1 Ank_3 242 262 1.49939e-43 142.3 0.0031 7.7 7.0
pfu_aug2.0_224.1_13832.t1 8 2 Ank_2 243 337 0.0 200.9 3.8e-20 9.4e-17 61.1
pfu_aug2.0_224.1_13832.t1 10 2 Ank_5 271 305 0.0 153.7 2.5e-07 0.00063 19.9
pfu_aug2.0_224.1_13832.t1 13 2 Ank 277 307 0.0 177.8 2.3e-10 5.7e-07 29.0
pfu_aug2.0_224.1_13832.t1 13 2 Ank_3 277 304 1.49939e-43 142.3 3.1e-08 7.6e-05 22.5
pfu_aug2.0_224.1_13832.t1 8 2 Ank_4 309 364 1.4013e-45 152.7 3.6e-10 8.9e-07 29.2
pfu_aug2.0_224.1_13832.t1 10 3 Ank_5 310 351 0.0 153.7 1.7e-08 4.2e-05 23.6
pfu_aug2.0_224.1_13832.t1 13 3 Ank 311 338 0.0 177.8 1.2e-07 0.0003 20.4
pfu_aug2.0_224.1_13832.t1 13 3 Ank_3 311 338 1.49939e-43 142.3 1.6e-06 0.0039 17.2
pfu_aug2.0_224.1_13832.t1 8 3 Ank_2 344 404 0.0 200.9 5.2e-18 1.3e-14 54.3
pfu_aug2.0_224.1_13832.t1 13 4 Ank 346 374 0.0 177.8 3.5e-08 8.5e-05 22.1
pfu_aug2.0_224.1_13832.t1 10 4 Ank_5 346 384 0.0 153.7 3.6e-11 8.9e-08 32.1
pfu_aug2.0_224.1_13832.t1 13 4 Ank_3 346 371 1.49939e-43 142.3 0.00026 0.65 10.4
pfu_aug2.0_224.1_13832.t1 8 3 Ank_4 359 397 1.4013e-45 152.7 5.3e-10 1.3e-06 28.7
pfu_aug2.0_224.1_13832.t1 10 5 Ank_5 371 417 0.0 153.7 1.7e-10 4.2e-07 30.0
pfu_aug2.0_224.1_13832.t1 13 5 Ank 377 408 0.0 177.8 2.7e-10 6.6e-07 28.8
pfu_aug2.0_224.1_13832.t1 13 5 Ank_3 377 398 1.49939e-43 142.3 7.8e-07 0.0019 18.2
pfu_aug2.0_224.1_13832.t1 8 4 Ank_2 407 465 0.0 200.9 4.1e-08 0.0001 22.5
pfu_aug2.0_224.1_13832.t1 10 6 Ank_5 407 443 0.0 153.7 0.00024 0.6 10.4
pfu_aug2.0_224.1_13832.t1 8 4 Ank_4 407 430 1.4013e-45 152.7 0.018 43.0 4.7
pfu_aug2.0_224.1_13832.t1 13 6 Ank_3 409 431 1.49939e-43 142.3 0.00094 2.3 8.6
pfu_aug2.0_224.1_13832.t1 13 6 Ank 416 437 0.0 177.8 0.00072 1.8 8.5
pfu_aug2.0_224.1_13832.t1 8 5 Ank_2 449 540 0.0 200.9 8.5e-11 2.1e-07 31.1
pfu_aug2.0_224.1_13832.t1 13 7 Ank 449 465 0.0 177.8 0.37 920.0 -0.1
pfu_aug2.0_224.1_13832.t1 13 7 Ank_3 452 466 1.49939e-43 142.3 1.8 4500.0 -1.5
pfu_aug2.0_224.1_13832.t1 8 5 Ank_4 482 530 1.4013e-45 152.7 8.5e-08 0.00021 21.7
pfu_aug2.0_224.1_13832.t1 13 8 Ank_3 483 504 1.49939e-43 142.3 0.22 550.0 1.3
pfu_aug2.0_224.1_13832.t1 13 8 Ank 486 510 0.0 177.8 2.2 5500.0 -2.5
pfu_aug2.0_224.1_13832.t1 10 7 Ank_5 500 552 0.0 153.7 2.8e-07 0.00069 19.7
pfu_aug2.0_224.1_13832.t1 13 9 Ank 513 542 0.0 177.8 2.6e-05 0.063 13.1
pfu_aug2.0_224.1_13832.t1 13 9 Ank_3 513 535 1.49939e-43 142.3 5.0e-05 0.12 12.6
pfu_aug2.0_224.1_13832.t1 8 6 Ank_2 536 604 0.0 200.9 1.7e-10 4.3e-07 30.1
pfu_aug2.0_224.1_13832.t1 13 10 Ank 545 575 0.0 177.8 1.7e-05 0.042 13.6
pfu_aug2.0_224.1_13832.t1 13 10 Ank_3 545 570 1.49939e-43 142.3 0.0051 13.0 6.4
pfu_aug2.0_224.1_13832.t1 8 6 Ank_4 547 596 1.4013e-45 152.7 1.5e-08 3.6e-05 24.1
pfu_aug2.0_224.1_13832.t1 10 8 Ank_5 569 601 0.0 153.7 5.2e-05 0.13 12.5
pfu_aug2.0_224.1_13832.t1 13 11 Ank 577 605 0.0 177.8 4.2e-06 0.01 15.5
pfu_aug2.0_224.1_13832.t1 13 11 Ank_3 577 605 1.49939e-43 142.3 7.8e-06 0.019 15.1
pfu_aug2.0_224.1_13832.t1 8 7 Ank_4 597 630 1.4013e-45 152.7 8.3e-05 0.2 12.1
pfu_aug2.0_224.1_13832.t1 8 7 Ank_2 609 632 0.0 200.9 0.00013 0.31 11.3
pfu_aug2.0_224.1_13832.t1 10 9 Ank_5 610 632 0.0 153.7 7.2e-06 0.018 15.3
pfu_aug2.0_224.1_13832.t1 13 12 Ank 617 630 0.0 177.8 0.002 4.8 7.1
pfu_aug2.0_224.1_13832.t1 13 12 Ank_3 617 631 1.49939e-43 142.3 0.002 4.9 7.6
pfu_aug2.0_224.1_13832.t1 10 10 Ank_5 634 669 0.0 153.7 3.9e-05 0.097 12.9
pfu_aug2.0_224.1_13832.t1 8 8 Ank_4 634 658 1.4013e-45 152.7 0.0003 0.74 10.4
pfu_aug2.0_224.1_13832.t1 8 8 Ank_2 643 669 0.0 200.9 0.059 150.0 2.8
pfu_aug2.0_224.1_13832.t1 13 13 Ank 649 669 0.0 177.8 0.0068 17.0 5.4
pfu_aug2.0_224.1_13832.t1 13 13 Ank_3 649 670 1.49939e-43 142.3 0.01 25.0 5.5

Transcript
Transcript IDpfu_aug2.0_224.1_13832.t1
Definition-
>pfu_aug2.0_224.1_13832.t1
atgataggaagacatccgccagagtttggagatataccagatatagtaatagacatagatgaatgcccttactgttatgc
agtcttaagccatccaggagaagaacataactgcccggcagcagcagaaatacctcatccagtgcttcctctagtagtac
cggctccacctccaccagaaatagcagcacctccacaggcaggagtagaaccgccaccttatatagacccggatttggtc
attatccatatttgtcaaattattatcccaatccatggagaggaagaagagagatcactacagagtgactgtttaggtga
tgttggaatttctggtgaccatgactatcttatgtcgagtacctgtccaacatttcaggattgcagcgtacaaacagatc
tcaccatggatgatatgaaacaatacatggacgatgtgttgtccatcaataatccaaaattcgcatattacctcagcagt
ttctatccttcggagcttgaagtcaaagaaactccagagacaaatctttgcggtctgtcgaataagcaagaaccacatac
cgttcgtacagcattacaccagttaacaatcactacactaattcaagaagatcttgttttgtctttggcacaattatttc
ttcataaggtcaatgataaagtcaaagctttaactgaggagactagatatgacgtcaaaagcaaaaggcaaagaactttt
ccatgtcttcatcttgcctccttacttggtaaaaaacaattagttgaattgtaccttgaaacaggacagctccatggact
tacaatcaatcaaagaaattcaaaacatgatacagcccttcattggagttcgaggtccggacactctgctattgtggaat
acctattaaataaccaggctgatccaaatattgggaatgacatccacaccacccctttacattgggcagtaagataccaa
aaaagagaagtaatagaaattctgttgaatgatcagagaacggatgttaacaaagtgagatgtgtagggttctcaacacc
actaatcattgcaagtaaaattggatcgaagaacatagttgaactattgttagcaaataacgcagacgggaatgtaaagg
atccaagtggaaaaacagctttacacattgcaatagaaaatggacattcagacgttgttaagctactgctcggaaataac
acagaaatgactattgaagacaacaacggagacaaggcaatgacaactgctgcacgaaaaggacaagccgatattgttct
atatcttctgcaacagaatgacaatccattcacgaaaaaccacatgggtcatgacgtatggtattatgcttatgaaaata
atgatgacgcggttctttctgtgcttattgatcacttccttcctaaagctggaataagcacttctgttcaatgttctgtt
agttctattctattccaagctgcaagcctaggtaagtgcaagcaaatcgaaaccattttggatcgtggtgtgtctgcaga
aataacggattcagagggaaattcatttttgcattatgctgctgaaaatgatcaagtagaagtaatacaaacgttttgca
agttctgcgatatgaatattcaaaacaaagttggaattacccctttacatcgtgctgtaatgctccataatataaaaagc
atacaaactctaatccgtgttggggtaaatgcagccattaaggatgtaaatggaaggacagttcttcatttagctgctat
gcataatttagatgcacaattagttcaagaacttgttgcatacattataaatgtacactcctgggaagatttgaatgccg
aggatgagaatggaaacaatgcacttcatattgcagcagaatacaggagatctgaccctctattggaattcaggcatatt
tccttatatgcccaaaacaagaagggaaatacaccctttcatttatctgtccatgttgatagtccccatgttcttgaaaa
gattttagatgttttcgaggttatggatcaaaagggcatgggattttattgtattcttcccttagaacctcttatacttc
tacttttcgccacgatatcgatgtacttggagtcggcagttcaccgtcgagaattaaggaagtctatgattccgtactac
gttatatatattgctttctctttaacaattattatctggatgggtttagttttggctgggataaggcttcaagattacat
attagcaaagtttttccttaaacgatcgaaaaaagaagatttaccaaagaaatcgaagggatatttcttcggtctatttc
cgtcatttttcgaaaaggtctcggatgacaaagaagatccatttgacgaaattcaggaacaagtgggaaaacttagtacg
gaaatccgtgtaatatcgaagaaagtggatatccttttgaagagtaaggaagacaatatgatgtaa

Protein
Protein IDpfu_aug2.0_224.1_13832.t1
Definition-
>pfu_aug2.0_224.1_13832.t1
MIGRHPPEFGDIPDIVIDIDECPYCYAVLSHPGEEHNCPAAAEIPHPVLPLVVPAPPPPEIAAPPQAGVEPPPYIDPDLV
IIHICQIIIPIHGEEEERSLQSDCLGDVGISGDHDYLMSSTCPTFQDCSVQTDLTMDDMKQYMDDVLSINNPKFAYYLSS
FYPSELEVKETPETNLCGLSNKQEPHTVRTALHQLTITTLIQEDLVLSLAQLFLHKVNDKVKALTEETRYDVKSKRQRTF
PCLHLASLLGKKQLVELYLETGQLHGLTINQRNSKHDTALHWSSRSGHSAIVEYLLNNQADPNIGNDIHTTPLHWAVRYQ
KREVIEILLNDQRTDVNKVRCVGFSTPLIIASKIGSKNIVELLLANNADGNVKDPSGKTALHIAIENGHSDVVKLLLGNN
TEMTIEDNNGDKAMTTAARKGQADIVLYLLQQNDNPFTKNHMGHDVWYYAYENNDDAVLSVLIDHFLPKAGISTSVQCSV
SSILFQAASLGKCKQIETILDRGVSAEITDSEGNSFLHYAAENDQVEVIQTFCKFCDMNIQNKVGITPLHRAVMLHNIKS
IQTLIRVGVNAAIKDVNGRTVLHLAAMHNLDAQLVQELVAYIINVHSWEDLNAEDENGNNALHIAAEYRRSDPLLEFRHI
SLYAQNKKGNTPFHLSVHVDSPHVLEKILDVFEVMDQKGMGFYCILPLEPLILLLFATISMYLESAVHRRELRKSMIPYY
VIYIAFSLTIIIWMGLVLAGIRLQDYILAKFFLKRSKKEDLPKKSKGYFFGLFPSFFEKVSDDKEDPFDEIQEQVGKLST
EIRVISKKVDILLKSKEDNMM

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