Gene
| Gene Model ID | pfu_aug2.0_224.1_13833 |
|---|---|
| Locus | scaffold224.1 : 368163 ... 393079 : + |
| To GenomeBrowser | scaffold224.1:368163..393079 |
| Genes list of scaffold | scaffold224.1 |
| Synonym | pfu_aug1.0_11485.1_68340 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_224.1_13833.t1 | 8 | 1 | LRR_8 | 126 | 183 | 2.7e-28 | 97.4 | 1.3e-07 | 0.00028 | 20.5 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 1 | LRR_1 | 127 | 134 | 6.1e-12 | 43.8 | 1.5 | 3300.0 | -1.1 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 2 | LRR_8 | 149 | 188 | 2.7e-28 | 97.4 | 4.1e-08 | 8.7e-05 | 22.2 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 1 | LRR_4 | 149 | 184 | 2.5e-21 | 74.8 | 4.2e-08 | 8.8e-05 | 22.0 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 2 | LRR_1 | 149 | 169 | 6.1e-12 | 43.8 | 0.00076 | 1.6 | 9.0 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 3 | LRR_1 | 172 | 185 | 6.1e-12 | 43.8 | 0.00024 | 0.51 | 10.5 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 2 | LRR_4 | 199 | 215 | 2.5e-21 | 74.8 | 0.048 | 100.0 | 2.6 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 4 | LRR_1 | 199 | 214 | 6.1e-12 | 43.8 | 0.17 | 350.0 | 1.9 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 3 | LRR_8 | 217 | 254 | 2.7e-28 | 97.4 | 0.063 | 130.0 | 2.3 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 3 | LRR_4 | 217 | 240 | 2.5e-21 | 74.8 | 0.69 | 1500.0 | -1.1 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 4 | LRR_8 | 264 | 301 | 2.7e-28 | 97.4 | 6.6e-05 | 0.14 | 11.9 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 4 | LRR_4 | 265 | 304 | 2.5e-21 | 74.8 | 2.2e-09 | 4.6e-06 | 26.1 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 5 | LRR_1 | 265 | 280 | 6.1e-12 | 43.8 | 0.36 | 760.0 | 0.9 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 6 | LRR_1 | 288 | 302 | 6.1e-12 | 43.8 | 0.00056 | 1.2 | 9.4 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 5 | LRR_4 | 289 | 324 | 2.5e-21 | 74.8 | 9.9e-08 | 0.00021 | 20.8 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 5 | LRR_8 | 309 | 354 | 2.7e-28 | 97.4 | 1.7e-09 | 3.6e-06 | 26.6 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 6 | LRR_4 | 310 | 348 | 2.5e-21 | 74.8 | 0.0008 | 1.7 | 8.3 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 7 | LRR_1 | 311 | 327 | 6.1e-12 | 43.8 | 3.6 | 7600.0 | -2.2 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 8 | LRR_1 | 334 | 354 | 6.1e-12 | 43.8 | 0.008 | 17.0 | 5.9 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 6 | LRR_8 | 359 | 418 | 2.7e-28 | 97.4 | 8.3e-12 | 1.8e-08 | 34.0 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 7 | LRR_4 | 359 | 394 | 2.5e-21 | 74.8 | 8.3e-07 | 0.0018 | 17.8 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 9 | LRR_1 | 359 | 381 | 6.1e-12 | 43.8 | 0.00051 | 1.1 | 9.5 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 10 | LRR_1 | 384 | 405 | 6.1e-12 | 43.8 | 0.0093 | 20.0 | 5.7 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 7 | LRR_8 | 407 | 460 | 2.7e-28 | 97.4 | 1.2e-10 | 2.5e-07 | 30.3 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 8 | LRR_4 | 408 | 442 | 2.5e-21 | 74.8 | 2.8e-06 | 0.0059 | 16.2 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 11 | LRR_1 | 408 | 429 | 6.1e-12 | 43.8 | 0.0011 | 2.3 | 8.5 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 12 | LRR_1 | 431 | 443 | 6.1e-12 | 43.8 | 0.037 | 78.0 | 3.9 |
| pfu_aug2.0_224.1_13833.t1 | 8 | 8 | LRR_8 | 690 | 704 | 2.7e-28 | 97.4 | 2.0 | 4200.0 | -2.5 |
| pfu_aug2.0_224.1_13833.t1 | 13 | 13 | LRR_1 | 700 | 711 | 6.1e-12 | 43.8 | 6.2 | 13000.0 | -2.9 |
Transcript
| Transcript ID | pfu_aug2.0_224.1_13833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13833.t1 atgaagaactgctccttcaatgagtacccatgcgataagtcaccagtgaattgtattcctatcgaaagtatacaacacct gtacaacaccgactgcaacgttggacaatatttgatacaggatgtaaacccaaaacttgattgcaaaggcgaaaacttaa tgtgtaatcctacgcggaagtgccccggatcatcatctgaatgtgattggaatgcagtttgcctccaccaacatgaaatt tgcgacggaatcgcaaattgcccctacatggatgacgagttgaattgtaaattgagctgtccacctggatgttacagctg tatagataacaagtacaaatgttctccttcagcgattgattcccttcatgctggaattacttatctcgacatatctggac accctttcaacattacgcgaatctgttccaaaacatttttgactttgacgtatcttaatgtttcacgttgtcgtctgtca aatgtttcctgcctatttaataacttacttccatcactgcgagtcctcgatttgtcatacaacaatatcaaagtcatgga acgatataactttcctttcagggatctcggtacaattttataccttgatggtaaccccattgttgccatggaaacgtttc aaaactggaaaacgttatcaataagaaacgcatcgttgaaaaatgtaaaatggagtgaacgacttggtggtttgctgtcc ctgaattttaatgttacaaactcaagcaaaattattccaccaaaatactatcggggttcatctgccagcagcgtggaatc tgtggattttagctacaatgacataagatctatagcgtttctcaaatttttcagtacaatccactctctagatctgtcaa ataataaattgtcagatttgtcagaattaccacagatttcactcccgtaccttaaacaattccatctgatggataacaaa atcgatcacataaattcgacattctttgagagaaaagaatctattgaagttctgaacttagcaaggaatgatataaatac tattgacgatcattgttttcagccaattaaatttaatttacgtaacttgagtctcaacaataacgttatcttttctctgc catctgccgttttccagaatttgacaaaacttttactgttagatttgcgaagaaaccgtttgaatctattacattctgat atttttcaagaccttatagaactgcgtattttacttcttaatgacaatagattgtcaagttttccaaagaagatcttcaa aaccctgtactccttagaagaattaaatatagcagggaatgatattccggtttacgaaaagatgtttacgggacttggag tattacgtatactgaaggtagagtatttcacattatgctgtgcgcgaccaccgaatgttgtaattgacaattgtattgca cgttcaaaacagatttcatcatgtccatatctactgcagcatggattcctcagtgtggcaatttgaaaatcagaaaccga aggcatacaaaatcaggataaaacaggaaccaaagcaaataaacaaaaaccaccaccacatgaaaagaagcgaactcccg atatgggagtgagaccaggtgccaaggaagaatccttgaatatgaattttgagaggatgaagcgatgtgatgtccgtttt ggtaataaggaaatagattgcaagtgtaaggatacttggcttccagattggctctcttcagaaacctgtagctggactat aaacgaggaagaattaacatgcaacacaaagataggcaaagtaaaggccgaagaactaaagaaggacatgcatgcagaat ttggacgattaatcgatgaagaggtgatagaaaaaatgaatgcgtccagaaatataattgtgatgttgtcgatggagtac gttgtccatgatgacgggagttgtgaagctgacatcaggaacagcatcgaatggcggcacgcatggaatttgttccggaa aaataaacgtcttcgactaattttgatcaattttgatcagatgagaacagtggatgctgacaatctgcaggtgcgagcat ttttacgacttcaaaaaaccttggacttctctaatagaaatcactccctagtggaagacattgaaacccttttgggaaaa ccgtatcgacaaactggtctcaagaatggaaaaccgaagttttacaattacgatttagtccgaaacataaagaaagggca aaagcagaaaaaaaagatgttctga |
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Protein
| Protein ID | pfu_aug2.0_224.1_13833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13833.t1 MKNCSFNEYPCDKSPVNCIPIESIQHLYNTDCNVGQYLIQDVNPKLDCKGENLMCNPTRKCPGSSSECDWNAVCLHQHEI CDGIANCPYMDDELNCKLSCPPGCYSCIDNKYKCSPSAIDSLHAGITYLDISGHPFNITRICSKTFLTLTYLNVSRCRLS NVSCLFNNLLPSLRVLDLSYNNIKVMERYNFPFRDLGTILYLDGNPIVAMETFQNWKTLSIRNASLKNVKWSERLGGLLS LNFNVTNSSKIIPPKYYRGSSASSVESVDFSYNDIRSIAFLKFFSTIHSLDLSNNKLSDLSELPQISLPYLKQFHLMDNK IDHINSTFFERKESIEVLNLARNDINTIDDHCFQPIKFNLRNLSLNNNVIFSLPSAVFQNLTKLLLLDLRRNRLNLLHSD IFQDLIELRILLLNDNRLSSFPKKIFKTLYSLEELNIAGNDIPVYEKMFTGLGVLRILKVEYFTLCCARPPNVVIDNCIA RSKQISSCPYLLQHGFLSVAIXKSETEGIQNQDKTGTKANKQKPPPHEKKRTPDMGVRPGAKEESLNMNFERMKRCDVRF GNKEIDCKCKDTWLPDWLSSETCSWTINEEELTCNTKIGKVKAEELKKDMHAEFGRLIDEEVIEKMNASRNIIVMLSMEY VVHDDGSCEADIRNSIEWRHAWNLFRKNKRLRLILINFDQMRTVDADNLQVRAFLRLQKTLDFSNRNHSLVEDIETLLGK PYRQTGLKNGKPKFYNYDLVRNIKKGQKQKKKMF |
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