Gene
| Gene Model ID | pfu_aug2.0_224.1_13834 |
|---|---|
| Locus | scaffold224.1 : 397639 ... 406332 : - |
| To GenomeBrowser | scaffold224.1:397639..406332 |
| Genes list of scaffold | scaffold224.1 |
| Synonym | pfu_aug1.0_86498.1_49364 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ankyrin repeat and ibr domain-containing protein 1-like | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_224.1_13834.t1 | 5 | 1 | Ank | 40 | 48 | 2.3e-08 | 33.4 | 1.0 | 3000.0 | -1.7 |
| pfu_aug2.0_224.1_13834.t1 | 2 | 1 | Ank_2 | 60 | 114 | 2.4e-12 | 46.9 | 0.00056 | 1.7 | 9.0 |
| pfu_aug2.0_224.1_13834.t1 | 3 | 1 | Ank_5 | 61 | 84 | 3.3e-09 | 36.6 | 0.0011 | 3.2 | 8.1 |
| pfu_aug2.0_224.1_13834.t1 | 3 | 1 | Ank_4 | 61 | 83 | 1.1e-08 | 35.3 | 0.00062 | 1.8 | 9.1 |
| pfu_aug2.0_224.1_13834.t1 | 5 | 2 | Ank | 61 | 72 | 2.3e-08 | 33.4 | 2.3 | 6900.0 | -2.8 |
| pfu_aug2.0_224.1_13834.t1 | 5 | 3 | Ank | 76 | 114 | 2.3e-08 | 33.4 | 0.029 | 87.0 | 3.2 |
| pfu_aug2.0_224.1_13834.t1 | 2 | 2 | Ank_2 | 95 | 184 | 2.4e-12 | 46.9 | 1.2e-13 | 3.5e-10 | 40.1 |
| pfu_aug2.0_224.1_13834.t1 | 3 | 2 | Ank_4 | 97 | 150 | 1.1e-08 | 35.3 | 1.6e-07 | 0.00047 | 20.6 |
| pfu_aug2.0_224.1_13834.t1 | 3 | 2 | Ank_5 | 122 | 169 | 3.3e-09 | 36.6 | 1.1e-09 | 3.2e-06 | 27.2 |
| pfu_aug2.0_224.1_13834.t1 | 5 | 4 | Ank | 131 | 158 | 2.3e-08 | 33.4 | 6.7e-09 | 2.0e-05 | 24.1 |
| pfu_aug2.0_224.1_13834.t1 | 3 | 3 | Ank_4 | 146 | 183 | 1.1e-08 | 35.3 | 0.045 | 130.0 | 3.2 |
| pfu_aug2.0_224.1_13834.t1 | 3 | 3 | Ank_5 | 163 | 183 | 3.3e-09 | 36.6 | 0.14 | 430.0 | 1.3 |
| pfu_aug2.0_224.1_13834.t1 | 5 | 5 | Ank | 164 | 183 | 2.3e-08 | 33.4 | 0.22 | 650.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_224.1_13834.t1 | gi|676495276|ref|XP_009066836.1| | hypothetical protein LOTGIDRAFT_134513 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_224.1_13834.t1 | gi|524872858|ref|XP_005093184.1| | PREDICTED: ankyrin repeat and IBR domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_224.1_13834.t1 | gi|642929562|ref|XP_008195885.1| | PREDICTED: ankyrin repeat and IBR domain-containing protein 1-like [Tribolium castaneum] | 3.0e-37 |
| pfu_aug2.0_224.1_13834.t1 | gi|291229428|ref|XP_002734676.1| | PREDICTED: ankyrin repeat and IBR domain-containing protein 1-like [Saccoglossus kowalevskii] | 2.0e-36 |
| pfu_aug2.0_224.1_13834.t1 | gi|700415309|ref|XP_009945569.1| | PREDICTED: ankyrin repeat and IBR domain-containing protein 1-like, partial [Leptosomus discolor] | 9.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_224.1_13834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13834.t1 atggttcagggctcaaagacaggattggacaagatgaggagagagaagatggagaggcaaacggtgttggctggtcaagg tgaaaagctgaataactgcagcttcaatggaaacgtagaagaagccataaaagatctactgaaagatgtacccgactact tcttagatgatagaatttttctccatgatcaccatggcaacccaaacaaaacaaatgggaagaaggagacgtgtttacac tgcctatgtacagagaagccaacacacgcccagttttaccccgtacaaaagaagcgactcgattgtctgcatattatgct gaaatggcgaggggcggaactgaaggatggagagaaagagagagttgatcttacagcccaagacgagaatgagaatacag ctctacactatgcagcggcttctggattgaaatactgtgtcgagacactggtacagtatggtgctccactgttcacagag aataatgaccaggagacgccgtgtgattcagcggagagaggcggtcatgctgaaatagcgctatatctggaatccaaaat ggtcttctctgtaagttataattccctcattgatcaaatgatgagatag |
|
Protein
| Protein ID | pfu_aug2.0_224.1_13834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_224.1_13834.t1 MVQGSKTGLDKMRREKMERQTVLAGQGEKLNNCSFNGNVEEAIKDLLKDVPDYFLDDRIFLHDHHGNPNKTNGKKETCLH CLCTEKPTHAQFYPVQKKRLDCLHIMLKWRGAELKDGEKERVDLTAQDENENTALHYAAASGLKYCVETLVQYGAPLFTE NNDQETPCDSAERGGHAEIALYLESKMVFSVSYNSLIDQMMR |
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