Gene
| Gene Model ID | pfu_aug2.0_2240.1_02059 |
|---|---|
| Locus | scaffold2240.1 : 51206 ... 70720 : + |
| To GenomeBrowser | scaffold2240.1:51206..70720 |
| Genes list of scaffold | scaffold2240.1 |
| Synonym | pfu_aug1.0_1362.1_15442 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2240.1_02059.t1 | 1 | 1 | Muskelin_N | 1 | 72 | 3.6e-23 | 82.3 | 3.1e-26 | 6.5e-23 | 81.4 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 1 | Kelch_3 | 115 | 143 | 5.5e-23 | 80.5 | 2.4 | 5000.0 | -2.2 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 1 | Kelch_5 | 133 | 160 | 3.3e-07 | 30.1 | 0.00017 | 0.36 | 10.8 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 1 | Kelch_4 | 136 | 178 | 2.6e-19 | 68.7 | 8.7e-08 | 0.00018 | 21.1 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 1 | Kelch_6 | 138 | 176 | 3.9e-16 | 58.4 | 9.0e-06 | 0.019 | 15.1 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 1 | Kelch_1 | 149 | 178 | 5.9e-13 | 48.1 | 1.6e-07 | 0.00034 | 20.1 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 2 | Kelch_3 | 149 | 198 | 5.5e-23 | 80.5 | 3.3e-11 | 7.0e-08 | 32.4 |
| pfu_aug2.0_2240.1_02059.t1 | 4 | 1 | Kelch_2 | 150 | 180 | 1.4e-06 | 27.8 | 1.0e-05 | 0.022 | 14.5 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 2 | Kelch_5 | 188 | 206 | 3.3e-07 | 30.1 | 0.23 | 490.0 | 0.8 |
| pfu_aug2.0_2240.1_02059.t1 | 4 | 2 | Kelch_2 | 191 | 240 | 1.4e-06 | 27.8 | 0.063 | 130.0 | 2.5 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 2 | Kelch_6 | 191 | 240 | 3.9e-16 | 58.4 | 0.00013 | 0.27 | 11.4 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 3 | Kelch_3 | 221 | 239 | 5.5e-23 | 80.5 | 0.00084 | 1.8 | 8.8 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 2 | Kelch_4 | 221 | 239 | 2.6e-19 | 68.7 | 0.00046 | 0.97 | 9.2 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 2 | Kelch_1 | 223 | 238 | 5.9e-13 | 48.1 | 0.0047 | 10.0 | 5.7 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 3 | Kelch_4 | 258 | 305 | 2.6e-19 | 68.7 | 4.1e-05 | 0.087 | 12.6 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 3 | Kelch_5 | 263 | 276 | 3.3e-07 | 30.1 | 0.0035 | 7.4 | 6.6 |
| pfu_aug2.0_2240.1_02059.t1 | 4 | 3 | Kelch_2 | 263 | 302 | 1.4e-06 | 27.8 | 0.022 | 46.0 | 3.9 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 3 | Kelch_6 | 263 | 305 | 3.9e-16 | 58.4 | 0.00067 | 1.4 | 9.1 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 3 | Kelch_1 | 264 | 305 | 5.9e-13 | 48.1 | 0.00014 | 0.3 | 10.6 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 4 | Kelch_3 | 265 | 320 | 5.5e-23 | 80.5 | 0.0003 | 0.64 | 10.2 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 4 | Kelch_5 | 314 | 351 | 3.3e-07 | 30.1 | 0.0048 | 10.0 | 6.1 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 4 | Kelch_4 | 315 | 357 | 2.6e-19 | 68.7 | 1.5e-06 | 0.0032 | 17.1 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 4 | Kelch_6 | 328 | 357 | 3.9e-16 | 58.4 | 0.012 | 24.0 | 5.2 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 4 | Kelch_1 | 328 | 353 | 5.9e-13 | 48.1 | 0.011 | 24.0 | 4.5 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 5 | Kelch_3 | 329 | 360 | 5.5e-23 | 80.5 | 8.6e-06 | 0.018 | 15.1 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 5 | Kelch_6 | 412 | 446 | 3.9e-16 | 58.4 | 0.00025 | 0.53 | 10.5 |
| pfu_aug2.0_2240.1_02059.t1 | 4 | 4 | Kelch_2 | 415 | 447 | 1.4e-06 | 27.8 | 0.0036 | 7.6 | 6.4 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 5 | Kelch_4 | 430 | 448 | 2.6e-19 | 68.7 | 0.0042 | 8.9 | 6.1 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 5 | Kelch_1 | 431 | 447 | 5.9e-13 | 48.1 | 0.0014 | 3.0 | 7.4 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 6 | Kelch_3 | 433 | 477 | 5.5e-23 | 80.5 | 0.0002 | 0.42 | 10.8 |
| pfu_aug2.0_2240.1_02059.t1 | 5 | 5 | Kelch_5 | 467 | 478 | 3.3e-07 | 30.1 | 0.18 | 370.0 | 1.2 |
| pfu_aug2.0_2240.1_02059.t1 | 6 | 6 | Kelch_4 | 469 | 485 | 2.6e-19 | 68.7 | 2.0 | 4200.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2240.1_02059.t1 | gi|676437417|ref|XP_009048197.1| | hypothetical protein LOTGIDRAFT_225475 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2240.1_02059.t1 | gi|524874891|ref|XP_005094179.1| | PREDICTED: muskelin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2240.1_02059.t1 | gi|241028751|ref|XP_002406352.1| | Muskelin, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_2240.1_02059.t1 | gi|597777611|ref|XP_007252459.1| | PREDICTED: muskelin-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_2240.1_02059.t1 | gi|573891173|ref|XP_006633345.1| | PREDICTED: muskelin-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2240.1_02059.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2240.1_02059.t1 atgcaggcatggggtccctgctttaacttcagtatatggtatatagaattacatggaaaggatgattgggaggttgtcaa accttgtctcaactggtttgtcacatacagagaacgtgaagctgtaaggttgtgtttaaaacatttccgccagcggcagt acacagaagcttacgaggcattacagaaaaagacgaaaattgttcttgagcatccaatactgacagaattacatgatcta ctagtcaaacaaggcaatttcagcgatagtgagactctagttaccagagctgctgaggagggtctgtttgaccagtacat taatgatcaggactataaaccacagtggactcccatagaacctgttactagaggtgacagtatatcagacaacaggccag gtatgaggggaggtcatcagatgtgtctggacatacagacagagatgctgtacttatttggaggctgggacggcaatcgt gatttagcagatctatggtcataccatgtcacctcgaaggaatggacttgtctgtgtaaagacacgaaacaagagggagg accaagtgcaagatcgtgtcacaaaatgtgccttgatccggagaggaagcagatatttaccctgggacggtatctggact ccagtgtaaggtcaggggataatctcaagagtgacttttatatgtatgatatcacttctgggaagtggacacttataaca gaggatactcacgccatgggtggacctaagctgatatttgaccaccaagtggctatcgacattgagagacaaactattta tgtgtttggaggacgtgttctcacagggcctagtgagttaggggagaggggatcagagcctgaattcagtggattgtttg cctatcatgtacccacaaacacatggaataaggtcatggatgactgctcacagttccggtcaaggatcggccactccatg ttatttcatcctaggaggcggttactgtacatatttgccggtcagaggtcaaaggagcacttaaatgacttcttcacata caatgtggacagtggtcacatcgaggtcatcgctgatggctcaaagaaggactcccaagggggtagggtattatcatctc cccagtcaatcctcaatgagaccaggggaaactatcatcctatactcagagatttcatcaaatcatctgtgcctgctgca ggtttcactcaacgagcaactattgacccagataaagatgaaatccatgtattatctggtctcagcaaggagaaggataa acgagataatgtaaagaattctttttgggtctacagtattgtcaaaaataaatggtcgtgtatttataagaatgagaatt caggtcaacaatactggacgaagatgcaacacgtggagcctgtaccgagatttgctcatcaacttgtctacgatcatatt agaaaaatctacatggagtagttatgtagactatccacagaacatttactacggagatgtaaatatttcattcggaagta caagtttcaagagctggctggtgatagccctcggactgctatggtttacctgcaaaacgaattagcttctattgttgacc actcaaacagcaatgaaaggaaagagtttgaatgtttggcctctacattgtttaaagtaccagatatggaagaagaactg ttcgaggaatcccacttggttgacatgacggaacatcatcagagcagaacggaactttttgacaagcttgtcaccttctt ccccgataatatgactcaacctaaaggaaatctggtcgacttgatacctctctactga |
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Protein
| Protein ID | pfu_aug2.0_2240.1_02059.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2240.1_02059.t1 MQAWGPCFNFSIWYIELHGKDDWEVVKPCLNWFVTYREREAVRLCLKHFRQRQYTEAYEALQKKTKIVLEHPILTELHDL LVKQGNFSDSETLVTRAAEEGLFDQYINDQDYKPQWTPIEPVTRGDSISDNRPGMRGGHQMCLDIQTEMLYLFGGWDGNR DLADLWSYHVTSKEWTCLCKDTKQEGGPSARSCHKMCLDPERKQIFTLGRYLDSSVRSGDNLKSDFYMYDITSGKWTLIT EDTHAMGGPKLIFDHQVAIDIERQTIYVFGGRVLTGPSELGERGSEPEFSGLFAYHVPTNTWNKVMDDCSQFRSRIGHSM LFHPRRRLLYIFAGQRSKEHLNDFFTYNVDSGHIEVIADGSKKDSQGGRVLSSPQSILNETRGNYHPILRDFIKSSVPAA GFTQRATIDPDKDEIHVLSGLSKEKDKRDNVKNSFWVYSIVKNKWSCIYKNENSGQQYWTKMQHVEPVPRFAHQLVYDHI RKIYMEXLCRLSTEHLLRRCKYFIRKYKFQELAGDSPRTAMVYLQNELASIVDHSNSNERKEFECLASTLFKVPDMEEEL FEESHLVDMTEHHQSRTELFDKLVTFFPDNMTQPKGNLVDLIPLY |
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