Gene
| Gene Model ID | pfu_aug2.0_2240.1_02060 |
|---|---|
| Locus | scaffold2240.1 : 85536 ... 90789 : + |
| To GenomeBrowser | scaffold2240.1:85536..90789 |
| Genes list of scaffold | scaffold2240.1 |
| Synonym | pfu_aug1.0_1362.1_15443 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2240.1_02060.t1 | 1 | 1 | HLH | 2 | 54 | 1.8e-15 | 56.3 | 4.8e-19 | 3.6e-15 | 55.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2240.1_02060.t1 | gi|524864922|ref|XP_005089294.1| | PREDICTED: hairy/enhancer-of-split related with YRPW motif protein-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2240.1_02060.t1 | gi|524864920|ref|XP_005089293.1| | PREDICTED: hairy/enhancer-of-split related with YRPW motif protein-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2240.1_02060.t1 | gi|524864915|ref|XP_005089291.1| | PREDICTED: hairy/enhancer-of-split related with YRPW motif protein-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2240.1_02060.t1 | gi|380027321|ref|XP_003697376.1| | 4.0e-33 | |
| pfu_aug2.0_2240.1_02060.t1 | gi|572265475|ref|XP_006610872.1| | PREDICTED: hairy/enhancer-of-split related with YRPW motif protein 1-like isoform X4 [Apis dorsata] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_2240.1_02060.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2240.1_02060.t1 atgtcccatcggatcattgagaaaagaagaagggatcggatgaataactgtctagctgagcttagtcgcctgatcccctc taattatctgaagcagggccaaggtcgtattgagaagacagaaattatagaaatggcttcaaaacacatccgtcatcttc agaacttgaccaattttcacggcgggaaaatggagcagttccatgtagacggcaaaggtcgacattgctgtgaggagaag ttttacatgggttttaaagagtgccaggacgagatgctgcgatacttgatagaggtggaggggcgagatataaaagaggg tctgtgcacaggagtcatatcacatctagatcaaactagcaagaagttcctgctcaacccatcagtagtagataaagagc cattaggagatgacaaaaaagaagagaacattcattaccttattgacgactgtagtcgatctagcgatcagtccatagca gtgcccatgtatcaacctaacatggacagtccagggatgccgaatgcatcgtacaatacacaacacaactcccagagttt acagaacagtgggaatggaggaaacaaaaataactatctgcgcactttgctaatgccaaaggatctggagtctgggatgc ctggatcaggtatgagtggccttaatggtgtgcgatctccgttaaaggatggatgtggacagatgctctctgttggtaat atggagagcacatatggcagctcgagagctgacgccaatatgtcagtaaatggtagtggtataagtgacagactttccaa cagcagcagtggtggcagtgaaaagacactgaacgtgtgcgactcggatcagagtagtaactcgtatgcagcaagtggat ctggcaatattagtaacggaggaagctctcatgatagttcagtgtataaattcaaacataacatcacaaaacgtttctcg caagaagaaaagcgcgagcttcatccagcaccacccagtgatacatcatcaagtagctcaagagaagaggagatggaaaa agtcaaacgaaagtatccgcgtcaattcattcggcacaaggctcgaggaaatgcactggattcttctcagtcagggcttg agaatccattgatctacccgaacaataagtacggacatggaatatcaaatgtgtattcccactgtaatgaaaaagatgaa tcgggtgcgatggatgttcccttgccggcatttgtcttgaatcccgatggtacacattatatacctatatccatacatcc gtcacacttgggcaacatcatacccaaaaaggaaagttctgaactgcagacatatcacccgataagtattcctgtgaact tcggagggccacacattacaatgcggagcattagcaccatgcctccaaacaacaccaatgcgcttgacttgccaaaagcc tga |
|
Protein
| Protein ID | pfu_aug2.0_2240.1_02060.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2240.1_02060.t1 MSHRIIEKRRRDRMNNCLAELSRLIPSNYLKQGQGRIEKTEIIEMASKHIRHLQNLTNFHGGKMEQFHVDGKGRHCCEEK FYMGFKECQDEMLRYLIEVEGRDIKEGLCTGVISHLDQTSKKFLLNPSVVDKEPLGDDKKEENIHYLIDDCSRSSDQSIA VPMYQPNMDSPGMPNASYNTQHNSQSLQNSGNGGNKNNYLRTLLMPKDLESGMPGSGMSGLNGVRSPLKDGCGQMLSVGN MESTYGSSRADANMSVNGSGISDRLSNSSSGGSEKTLNVCDSDQSSNSYAASGSGNISNGGSSHDSSVYKFKHNITKRFS QEEKRELHPAPPSDTSSSSSREEEMEKVKRKYPRQFIRHKARGNALDSSQSGLENPLIYPNNKYGHGISNVYSHCNEKDE SGAMDVPLPAFVLNPDGTHYIPISIHPSHLGNIIPKKESSELQTYHPISIPVNFGGPHITMRSISTMPPNNTNALDLPKA |
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