Gene
| Gene Model ID | pfu_aug2.0_2245.1_18741 |
|---|---|
| Locus | scaffold2245.1 : 53256 ... 76774 : + |
| To GenomeBrowser | scaffold2245.1:53256..76774 |
| Genes list of scaffold | scaffold2245.1 |
| Synonym | pfu_aug1.0_19768.1_33040 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| active breakpoint cluster region-related protein | GO:0005096 GO:0005829 GO:0005886 GO:0007420 GO:0030036 GO:0030336 GO:0032496 GO:0042472 GO:0043314 GO:0043547 GO:0050728 GO:0050766 GO:0050885 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2245.1_18741.t1 | 2 | 1 | C2 | 17 | 30 | 3.0e-06 | 26.9 | 2.8 | 4100.0 | -2.4 |
| pfu_aug2.0_2245.1_18741.t1 | 2 | 2 | C2 | 160 | 223 | 3.0e-06 | 26.9 | 7.1e-09 | 1.0e-05 | 25.2 |
| pfu_aug2.0_2245.1_18741.t1 | 2 | 1 | RhoGAP | 290 | 373 | 0.0 | 219.6 | 1.6e-26 | 2.3e-23 | 82.4 |
| pfu_aug2.0_2245.1_18741.t1 | 2 | 2 | RhoGAP | 371 | 509 | 0.0 | 219.6 | 3.09687e-43 | 4.5e-40 | 136.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2245.1_18741.t1 | gi|675888600|ref|XP_009029802.1| | hypothetical protein HELRODRAFT_116148 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_2245.1_18741.t1 | gi|742209773|ref|XP_010859976.1| | PREDICTED: active breakpoint cluster region-related protein [Bison bison bison] | 0.0 |
| pfu_aug2.0_2245.1_18741.t1 | gi|591298185|ref|XP_007076158.1| | PREDICTED: active breakpoint cluster region-related protein isoform X3 [Panthera tigris altaica] | 0.0 |
| pfu_aug2.0_2245.1_18741.t1 | gi|591365916|ref|XP_007057819.1| | PREDICTED: active breakpoint cluster region-related protein [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2245.1_18741.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2245.1_18741.t1 atgggtatatatgacattgtatgtgtagaactaaaagaactgaagaacttttgtagatttgatgcttacttaaaaataca tcttgattcatttctagatgaacagccagtgaatgtgaaggaagacttagattccatgaagaaaaaaatagtcagcctga agtcagaactgaggtcagaggtcaaatcccatgctgaaaacactaaagataaatcatggtcaatcagcggtaaagttgct gccaggagtatagacaagttaaagaagaagatcgaggaacaagaagctgccttgattctcgcgtcgccacggttaccact tcaccttaagttccatgaggactccagggaccataccattttactgtcgacagactttgagagagaggaatggagggacg ccatacaaaaccaacagacgcttcatcatggtaatatccagagacagttaagtggtcatgatattcagggaatgattaat gacaatacatacgtagagctacacctcgactcttacggccatttctttatgaaggcacgtaccagccaggcgtataacag tacagaccccacatgggacgaggacttcgagttagaactggagggatctcagtcactgaggattttgtgttataaaaagt cctcagataactgtactctgattggacgaagtgcactagagttgagtacacagtggcttagcagtaaattccaggaacag aaaatcagcatgaatgagttgtccctgaccatatccgtgagacattcaccagctacaaagactctgaagagaactccgtc caggctacagggaggaatatttggtgctaaaatctccactgttacctcgagagagaagaagactgtaccaaccattgtga catcttgtataaaggaggtggaaggcagaggtatgacagagttgggaatctacagagtgtcaggggtaacatcagaggtc cagaaaatgaaaaaagcctttgacaaaaatattcgagctggtgtgaccatgctggcggatgcagacatacacgctgtcac cgggttactcaaactttacttcagggaattaccagaacctttgtttacagaagccagatataaacagctgttagatagtg tcggtatgacagagttgggaatctacagagtgtcaggagtaacatcagaggtccagaaaatgaaaaaagcctttgacaaa aatattcgagctggtgtgaccatgttggcggatgcggacatacacgctgtcacagggttactcaaactttacttcaggga attaccggaacctttgtttaccgaagccagatataaacagctgttagatagtgtcggactacatgacggggatgccaagg agaaggtcttcctggagttagtacatgatctacctgacgaaaactactataccgtcgtatctgtcatcgaacatctagtc aaggtaagcaggcaggagtcggagaacaaaatgtccttgaataaccttgccactatttttggtccaacccttctacatcc tgctgtaaaggagggacaactcacgcaagctgaattaatgcgaggtgcgcaggatgtgtttctacaagcagaagtcttac aatgtctgttagctgtcgcggctaaagaatataaaactcttttcgtgataaatcattaa |
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Protein
| Protein ID | pfu_aug2.0_2245.1_18741.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2245.1_18741.t1 MGIYDIVCVELKELKNFCRFDAYLKIHLDSFLDEQPVNVKEDLDSMKKKIVSLKSELRSEVKSHAENTKDKSWSISGKVA ARSIDKLKKKIEEQEAALILASPRLPLHLKFHEDSRDHTILLSTDFEREEWRDAIQNQQTLHHGNIQRQLSGHDIQGMIN DNTYVELHLDSYGHFFMKARTSQAYNSTDPTWDEDFELELEGSQSLRILCYKKSSDNCTLIGRSALELSTQWLSSKFQEQ KISMNELSLTISVRHSPATKTLKRTPSRLQGGIFGAKISTVTSREKKTVPTIVTSCIKEVEGRGMTELGIYRVSGVTSEV QKMKKAFDKNIRAGVTMLADADIHAVTGLLKLYFRELPEPLFTEARYKQLLDSVGMTELGIYRVSGVTSEVQKMKKAFDK NIRAGVTMLADADIHAVTGLLKLYFRELPEPLFTEARYKQLLDSVGLHDGDAKEKVFLELVHDLPDENYYTVVSVIEHLV KVSRQESENKMSLNNLATIFGPTLLHPAVKEGQLTQAELMRGAQDVFLQAEVLQCLLAVAAKEYKTLFVINH |
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