Gene
| Gene Model ID | pfu_aug2.0_228.1_27065 |
|---|---|
| Locus | scaffold228.1 : 24762 ... 49605 : - |
| To GenomeBrowser | scaffold228.1:24762..49605 |
| Genes list of scaffold | scaffold228.1 |
| Synonym | pfu_aug1.0_1680.1_22714 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_228.1_27065.t1 | 2 | 1 | AAA | 275 | 314 | 0.0 | 163.5 | 7.6e-14 | 3.5e-11 | 43.4 |
| pfu_aug2.0_228.1_27065.t1 | 1 | 1 | AAA_22 | 275 | 424 | 1.7e-10 | 41.1 | 1.0e-12 | 4.7e-10 | 39.7 |
| pfu_aug2.0_228.1_27065.t1 | 1 | 1 | AAA_2 | 276 | 409 | 1.6e-06 | 28.1 | 3.7e-08 | 1.7e-05 | 24.8 |
| pfu_aug2.0_228.1_27065.t1 | 2 | 2 | AAA | 326 | 449 | 0.0 | 163.5 | 1.0e-36 | 4.7e-34 | 117.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_228.1_27065.t1 | gi|524900084|ref|XP_005106466.1| | PREDICTED: 26S protease regulatory subunit 4-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_228.1_27065.t1 | gi|676492097|ref|XP_009065811.1| | hypothetical protein LOTGIDRAFT_197242 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_228.1_27065.t1 | gi|665804748|ref|XP_008550534.1| | PREDICTED: 26S protease regulatory subunit 4 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_228.1_27065.t1 | gi|755956627|ref|XP_011303495.1| | PREDICTED: 26S protease regulatory subunit 4 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_228.1_27065.t1 | gi|746831098|ref|XP_011051171.1| | PREDICTED: 26S protease regulatory subunit 4 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_228.1_27065.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27065.t1 atgctcaatcaaattaaagccacaattatgaatggcagccatggcagtgacagacttgttaacaggagtattgtcctgat ggatcaacacacctttattctaaggaacagagatataaaagaatttgacaacataatcctcagtaaacaaaattcatata agggtcagcaacaatcaggtgcaggaggtggccaaggagagaaaaaagatgacaaggagaaaaagaaaaagtacgaacca ccagttccaacacgtgttggtaaaaagaaaaagaagatgaaaggtcccgacactgccagtaaacttccacaagtgacgcc acacacaagatgccgattaaaacttctgaaaatgctgaggatcaaagattaccttttaatggaggaagaatttatcaaga accaagaaaggctgaagcctcaagaagaaaaacaggaggaagaaagaaccaaagtagacgagttgagaggctcccccatg tctgtcggcaccttagaggaaattatcgatgataaccacgccatcgtctctacgtctgtcggcagtgaacattacgtcag catcctgtcatttgtagacaaggaccagttggaacctggatgttcagtgttattaaaccataaggtacatgctgtggtag gtgtattatcagatgacacggaccctatggtcactgtgatgaagttagagaaagctccacaagagacatacgctgatatc ggtggtctggatcaacaaattcaggaaattaaggaatctgtggagctgcctctcacccatcctgaatattatgaagagat gggaatcaaacctcctaaaggtgtcattctgtatgggccacctggaacaggaaaaacattattagcaaaggctgtagcca accaaacatcagccacattcctccgagttgttggctcagaactcattcaaaaatatttgaaaaggcttttgctatggaag caaaatttcaaaagaaaaacattattagcaaaggctgtagccaaccaaacatcagccacattcctccgagttgttggctc agaactcattcaaaaatatttgggtgatggtcccaagcttgttcgagaattattcagggtcgctgaggagcatgcacctt cgattgtatttattgatgaaattgatgctattggtactaaaagatatgactcaaattcaggaggagagagagaaatacaa aggactatgttagaacttcttaatcagctagatggtttcgactccagaggggatgtaaaggttgtgatggcaacaaatcg tatagaaacactcgatcccgctcttatccgtcctggccgtatagataggaagatagaatttcctctccccgacgagaaaa ccaagcgaagaatcttcaccatacatacaagcaggatgaccctagccgatgacgtgaatatagatgattatgtcatggca aaggatgatttatcgggagctgatattaaggccatctgtacagaggcagggctcctagctctgagggagagaagaatgaa agtgactaacgatgactttaagtcagcaaaagacaatgttttgtatagaaagaatgagggaacgccggagggtttatatt tgtag |
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Protein
| Protein ID | pfu_aug2.0_228.1_27065.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27065.t1 MLNQIKATIMNGSHGSDRLVNRSIVLMDQHTFILRNRDIKEFDNIILSKQNSYKGQQQSGAGGGQGEKKDDKEKKKKYEP PVPTRVGKKKKKMKGPDTASKLPQVTPHTRCRLKLLKMLRIKDYLLMEEEFIKNQERLKPQEEKQEEERTKVDELRGSPM SVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADI GGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLKRLLLWK QNFKRKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQ RTMLELLNQLDGFDSRGDVKVVMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNIDDYVMA KDDLSGADIKAICTEAGLLALRERRMKVTNDDFKSAKDNVLYRKNEGTPEGLYL |
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