Gene
| Gene Model ID | pfu_aug2.0_228.1_27067 |
|---|---|
| Locus | scaffold228.1 : 62022 ... 163445 : - |
| To GenomeBrowser | scaffold228.1:62022..163445 |
| Genes list of scaffold | scaffold228.1 |
| Synonym | pfu_aug1.0_40699.1_63044 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_228.1_27067.t1 | 6 | 1 | CAP | 67 | 171 | 1.59748e-43 | 148.1 | 1.9e-10 | 6.9e-07 | 29.7 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 1 | MAM | 170 | 264 | 0.0 | 293.6 | 5.3e-16 | 2.0e-12 | 47.2 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 2 | MAM | 335 | 418 | 0.0 | 293.6 | 0.00011 | 0.4 | 10.4 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 2 | CAP | 399 | 421 | 1.59748e-43 | 148.1 | 2.6 | 9700.0 | -3.0 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 3 | CAP | 565 | 687 | 1.59748e-43 | 148.1 | 2.6e-19 | 9.6e-16 | 58.3 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 3 | MAM | 733 | 881 | 0.0 | 293.6 | 7.0e-34 | 2.6e-30 | 105.3 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 4 | MAM | 940 | 1089 | 0.0 | 293.6 | 1.0e-27 | 3.8e-24 | 85.2 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 4 | CAP | 1197 | 1241 | 1.59748e-43 | 148.1 | 0.39 | 1500.0 | -0.4 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 5 | CAP | 1240 | 1364 | 1.59748e-43 | 148.1 | 8.8e-18 | 3.3e-14 | 53.4 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 5 | MAM | 1433 | 1535 | 0.0 | 293.6 | 3.0e-08 | 0.00011 | 21.9 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 6 | CAP | 1584 | 1712 | 1.59748e-43 | 148.1 | 6.3e-10 | 2.3e-06 | 28.0 |
| pfu_aug2.0_228.1_27067.t1 | 6 | 6 | MAM | 1720 | 1840 | 0.0 | 293.6 | 1.1e-08 | 4.0e-05 | 23.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_228.1_27067.t1 | gi|32965153|gb|AAP91764.1| | HrTT-1-like [Ciona intestinalis] | 9.0e-28 |
| pfu_aug2.0_228.1_27067.t1 | gi|699255601|ref|XP_009861759.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs gon-1 [Ciona intestinalis] | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_228.1_27067.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27067.t1 atgggtatcacgaagattttactgtacaatctgatagcgagcagtctcgtcgccgcgaaagaatattttgagacgattga tgtacgtcatggtcaacgtaatttaccgcaagttggttttcgagagcgtcgatttgaacaccacagataccgacgtcaag tgacggtggaccaaggttttaaagacgacgctataacagaacacaacattgcaaggaatgcggtttctccagcctcaaca aacatgcatacagcggtatggaataaagatttagccttgactgcccagaactatgcaaatttatgcatttgggaacataa cgacaaccgcaggaccgataccaataacagggtgtggtcaccagactctgtgggagagaacctttatatgagctcttaca ataggcagcatatggttagagcagtacagctgtgggacgctgagaaatctgattacgatttaacctccaacacatgcagt agtacaaatccaggctgtggtcattacacacaggggcccacaccatcaccatatactggtccctctgcagcaagcgaagg tagttattatgtgtatacagaagtcagttacacatggaattcagatgactatgctgtccttgaatctagtgcgattttcg cagagggaacaagatgtgttcgctttgattaccatatgtatggtacaagtgtaggaaccttggaggtattagctggaagc accgttatatggtctttgtcaggtaaccagaatgaccaatggcatacacagatggtggatacagctgctcttggaaataa ccgacttcagcatgttcgtctgcgccttgccagaatggcgggacgtgtactattagtggctctacttacacatgtaaatg tccaacttcacacacagggtccaactgccaaattgctgcttcagcatgttcgtctgcgccttgccagaatggcgggacgt gtactattagtggctctacttacacatgtaaatgtccaacttcacacacagggtccaactgccaaattgctgtatattta cgtcactggtggttctgcttcggtcaaggatgaggcttacatagaaacgtcccattcgttgacagctacctccggatccg tatgcatacagtttttatttagtatggtagatgggactttacaggtcggctcaagatcgtccaccggttcagattacgtt cacaaccttaattataataccggaaactattggtacacttataatctttctgtaggctggaactggatcaactctagaaa gatcgatgatgacgccatacttgcagtggatggctctctgaccagtcaagataaggaattcttttgtaaaagttgttttt caaagccatcatcggaagctctagctctagctttgctatcgataacatcagtgttacgcagggcgcatgcccatcctcca aaaagaggcagtttaaaactcaaaaaagtgaagagggtcatgcacaacggacagactggaggaaagaagcagatcccaat ccaagcatcaacaaaaatcgacaccttcaagcgaaaagacgactcatctctttgcttcagaagtacagctggaaacaatg tccatttagaacttatgaacttacaaacatctcaacaaacaatgggacatccaacgacctcaccaataaaaaaaaaacgt gtttgtgaaacacgaatgcccccgttggcatttttgtcggtatggaacgacgacttggccaacactgcacagaactacgc caatgaatgcgtatgggctcacaacagtaaccgtaaatctcagacaagtaacagggtgtggtcacccgactccgtgggag agaacctttatagaagctctgcatcaatgtccgactcgcagcatatgaccagagctattgagatgtgggtaaatgagaag tatgactatgacctcaattctaacacatgcagtgggtcagcttgtggtcactacacacaggtagtatggcataactctgt taacgtgggatgcggaatcaactactgctcaggactcggtacaattgtcgtctgcaactacggccctgcaggaaattaca tcggacaaaagccatacaccgccagcagtacagggggatctagcggcggatctagtggcagcggagggtcagatagctct agtggatcggataatgaatctgtagatgagctgtcctgtggtttcgagtcatcagatatgtgtggattctctcagacagt aacaagctttcaatggaagagacgaagtggttcgactccctcctcgagtacgggaccttcaggtgccaatgaaggacagt actacatgtacacagaggtcagcggatcatggagcaccggatctaacgctatactggaatctggctcgaccttctcttcc ggtacaaagtgcatccagtttgactacaacatgaatgggaatgcaataggcacccttgacgtcatggctggtgacacagt attatggagcctctccggaaatcaaggttccgaatggcagacccaagaagtggaaacatccgcactcgccaatgaaaagt tgtccttcaaaggaacttacggaggaagctggaaaggcgacattgctatagacaatctgtccgtaacatcaggaggttgc tcctcatcatcagcatcctctccttgttcatctgcaccatgtcaaaatggaggagtgtgtacagatagtgggagctctta ccagtgtagctgtaccagctcttttaccggaaataactgtgaagaggctgtacaggaaccaagcggaggttcttcgtctt cttcatcaacgtttgattgtgattttgaaagtggcctgtgcggcatgacgcaaggtacaagcgatgacaagaactggaaa aggacgaacacggctgtttcatctggatattttaccaccggatactatatttacatttctggaagcaccgggtcacctgg cgactctgcttacattgaaacaagcagcttcgcagattcgacatctgaccgatgtgtaaaattcaaattcaacatgcagg gatcaaacaatggtattttgtctataggtgccatgtgcagctctggtaataaaattccagtcaccaccgtgtcccataac acgaatggattctggtacacatattacctgactctgtcctcctcatggctcaattctagaaagctctacttcgaagcaac aaccggaagtgatagtgatgactatatagccctggataatatcgaagtcatacaaggatcctgtccaacaagcaaaaaga gggagctggaaattcaggggatcggggagcacgagattcggaaaacagtccgtgacaagggaggatttagagacgaggaa gtcgaacccgagcagagcgaagagcgacgactcttaaccctgctgaggaaacgtttctctggaggtaatgacaaatatgg attattaccatatcccaacatacagcacagaataagtaattcagaaaatcataaaccgaaggcttacaaaatcaggataa aacacgaaagcaaacaaacacaaaccaaagcaaacaaacaccacaaacctccactacatgcaaataatcgatctctctat attggaaccaaggatacgagctttgcaatcgacagcctcttacaaaatgcacacaacaatagaatcaaaagatcaattat tgttagcgaggaattcaaaaaggtggcagtgggaagtcataataaagcaagattcagcgtaaacccgactgcttcaaaca tgcagaatatggaatggaatgacgatctggcaataacagcacagaattatggtgataaatgtatttgggcgcataacgat gataggacaaaagaaacaaaaaacaaaatatggaaaccagaacatgttggagagaatctttattacacaacagcaaaact atcagatgaagaagtaatggcgttagcggttacaaaatgggacgccgagaaaaaagactatgattacgaaactgcaacgt gcgctaaggataaggtctgcggacattatacacaggtagtctggcacaactcggtctatgtagggtgtggcatatcgtac tgcccaggaagtaaagttaacccagacgataaggcagactcagggtccacaccaaaacccgatggatcgggcgttgataa attactagtagcttttcacgaacatgaacatgataagttaacggcaagattcggagaatcgtacctgtatgtaagtggaa agaaaggaatggccaccatcaaccttcctaaatatttcggagaagaggaattcaattgcaactttgagactgatctatgc ggaatgaaaccagcgcttggttcttctgtttcatgggaaagaggaaagattgcagacataaaaccacgaaaaagcgaagg aggtcaagcatatctttatgctagtggagaaaatggcgaaggaacggccaccatttctcttccaaagtattatggagatg aaaatggtaaggcatgtgtgacttttagtacaaaggaaatcaggcctgacggcgtcaagaaaagcacaaacatcaaactc agttctaaatattcggtgccctctacaacattaggatggaaaatatggagcggtgaagtaaaagatggtgacaagaagag cgccagacatacaagcttggtttccgatgacgtcccaaaccaaaatactgatcaaggaagatttcagaggtcatttgggg tcagcgaggaattcaaacgtgtagccgtagaagaacacaacaaggcaaggttcaatgtctcgcctcctgcatcgaacatg caaaagatggtctggaatgacgatttagctaccacagctcaaaactatggcgataagtgtgactgggaacacaacccacg gaggacggaggacacgagaaacaaaatatggacgcccaaagatgtaggagaaaacctgtattacactacagccggtgaga aattcgttgaagaaaattataccgtatatcgggtaattttcgcgtcagccatgtcggatgaagaggtcatgaaaatagct gttgtaaaatgggatgcagagaagattgactatgacttcaatactggagattgtaccgagaacaaggtctgcggtcacta tacacaggaacttcatcaaaatccaaggataagccaaagacagggaggccctactaaggcaggttcgggttccaaatacg tttatataggcggtgatggagcagtaaagaaggatgcagtggcagttctgtatttaccattaaatattaaaactggaatg tactgcataagtgtaggtttcaagttccaagagcaaaaaagaggaaaactagaacttggcgcaggcggaagggtcattta tagagttgaagataaaaatgctggaaaatggaccaaagttaatatccaaataatggcaaaaggtggcggacctaagctgt acatgaagggtacattgctgaaaaataccaactccttcattgccatggacgatatcagtgtgaaagaaggaggatgtcca cggaaagtgaaatag |
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Protein
| Protein ID | pfu_aug2.0_228.1_27067.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27067.t1 MGITKILLYNLIASSLVAAKEYFETIDVRHGQRNLPQVGFRERRFEHHRYRRQVTVDQGFKDDAITEHNIARNAVSPAST NMHTAVWNKDLALTAQNYANLCIWEHNDNRRTDTNNRVWSPDSVGENLYMSSYNRQHMVRAVQLWDAEKSDYDLTSNTCS STNPGCGHYTQGPTPSPYTGPSAASEGSYYVYTEVSYTWNSDDYAVLESSAIFAEGTRCVRFDYHMYGTSVGTLEVLAGS TVIWSLSGNQNDQWHTQMVDTAALGNNRLQHVRLRLARMAGRVLLVALLTHVNVQLHTQGPTAKLLLQHVRLRLARMAGR VLLVALLTHVNVQLHTQGPTAKLLYIYVTGGSASVKDEAYIETSHSLTATSGSVCIQFLFSMVDGTLQVGSRSSTGSDYV HNLNYNTGNYWYTYNLSVGWNWINSRKIDDDAILAVDGSLTSQDKEFFCKSCFSKPSSEALALALLSITSVLRRAHAHPP KRGSLKLKKVKRVMHNGQTGGKKQIPIQASTKIDTFKRKDDSSLCFRSTAGNNVHLELMNLQTSQQTMGHPTTSPIKKKR VCETRMPPLAFLSVWNDDLANTAQNYANECVWAHNSNRKSQTSNRVWSPDSVGENLYRSSASMSDSQHMTRAIEMWVNEK YDYDLNSNTCSGSACGHYTQVVWHNSVNVGCGINYCSGLGTIVVCNYGPAGNYIGQKPYTASSTGGSSGGSSGSGGSDSS SGSDNESVDELSCGFESSDMCGFSQTVTSFQWKRRSGSTPSSSTGPSGANEGQYYMYTEVSGSWSTGSNAILESGSTFSS GTKCIQFDYNMNGNAIGTLDVMAGDTVLWSLSGNQGSEWQTQEVETSALANEKLSFKGTYGGSWKGDIAIDNLSVTSGGC SSSSASSPCSSAPCQNGGVCTDSGSSYQCSCTSSFTGNNCEEAVQEPSGGSSSSSSTFDCDFESGLCGMTQGTSDDKNWK RTNTAVSSGYFTTGYYIYISGSTGSPGDSAYIETSSFADSTSDRCVKFKFNMQGSNNGILSIGAMCSSGNKIPVTTVSHN TNGFWYTYYLTLSSSWLNSRKLYFEATTGSDSDDYIALDNIEVIQGSCPTSKKRELEIQGIGEHEIRKTVRDKGGFRDEE VEPEQSEERRLLTLLRKRFSGGNDKYGLLPYPNIQHRISNSENHKPKAYKIRIKHESKQTQTKANKHHKPPLHANNRSLY IGTKDTSFAIDSLLQNAHNNRIKRSIIVSEEFKKVAVGSHNKARFSVNPTASNMQNMEWNDDLAITAQNYGDKCIWAHND DRTKETKNKIWKPEHVGENLYYTTAKLSDEEVMALAVTKWDAEKKDYDYETATCAKDKVCGHYTQVVWHNSVYVGCGISY CPGSKVNPDDKADSGSTPKPDGSGVDKLLVAFHEHEHDKLTARFGESYLYVSGKKGMATINLPKYFGEEEFNCNFETDLC GMKPALGSSVSWERGKIADIKPRKSEGGQAYLYASGENGEGTATISLPKYYGDENGKACVTFSTKEIRPDGVKKSTNIKL SSKYSVPSTTLGWKIWSGEVKDGDKKSARHTSLVSDDVPNQNTDQGRFQRSFGVSEEFKRVAVEEHNKARFNVSPPASNM QKMVWNDDLATTAQNYGDKCDWEHNPRRTEDTRNKIWTPKDVGENLYYTTAGEKFVEENYTVYRVIFASAMSDEEVMKIA VVKWDAEKIDYDFNTGDCTENKVCGHYTQELHQNPRISQRQGGPTKAGSGSKYVYIGGDGAVKKDAVAVLYLPLNIKTGM YCISVGFKFQEQKRGKLELGAGGRVIYRVEDKNAGKWTKVNIQIMAKGGGPKLYMKGTLLKNTNSFIAMDDISVKEGGCP RKVK |
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