Gene
| Gene Model ID | pfu_aug2.0_228.1_27068 |
|---|---|
| Locus | scaffold228.1 : 164227 ... 174165 : - |
| To GenomeBrowser | scaffold228.1:164227..174165 |
| Genes list of scaffold | scaffold228.1 |
| Synonym | pfu_aug1.0_11.1_50539 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_228.1_27068.t1 | 2 | 1 | PDZ | 34 | 117 | 5.6e-13 | 48.8 | 2.1e-16 | 1.6e-12 | 47.4 |
| pfu_aug2.0_228.1_27068.t1 | 1 | 1 | PDZ_2 | 55 | 107 | 2.1e-07 | 30.7 | 8.5e-11 | 6.3e-07 | 29.1 |
| pfu_aug2.0_228.1_27068.t1 | 2 | 2 | PDZ | 446 | 457 | 5.6e-13 | 48.8 | 1.2 | 9000.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_228.1_27068.t1 | gi|676443398|ref|XP_009050103.1| | hypothetical protein LOTGIDRAFT_238811 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_228.1_27068.t1 | gi|170067505|ref|XP_001868507.1| | conserved hypothetical protein [Culex quinquefasciatus] | 5.0e-38 |
| pfu_aug2.0_228.1_27068.t1 | gi|157107687|ref|XP_001649891.1| | AAEL004842-PA [Aedes aegypti] | 6.0e-38 |
| pfu_aug2.0_228.1_27068.t1 | gi|91080109|ref|XP_967250.1| | PREDICTED: uncharacterized protein LOC655596 isoform X1 [Tribolium castaneum] | 3.0e-37 |
| pfu_aug2.0_228.1_27068.t1 | gi|158296147|ref|XP_316633.4| | AGAP006605-PA [Anopheles gambiae str. PEST] | 4.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_228.1_27068.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27068.t1 atgaaatcaaggacccattcctttggcgcagacttggacgaccttgagaccgagagaagtattgtatttgacatagaaga caaccggaaacggaggacgatacagctaatccgagaaggaggctcgtgtggttttaccgtccagacatacgggatcaaga ataagaaaacgcgggaaattgaagtctttacatttgtcgattacgtcgaagtcacgggaccagcgcagagggcggggctt agaaaaggagatataatcctatctgttaatggaaagaacgtagaatttgctactcacagggaactggtggagactataca aaattcaggggatagaatcaggatggttgtattgttcgttgattgctgcaggaaagtagaactatacgacagattaatca aactcaagaaactactctctgtcaaagtcaatgaatatcgggatttggaaaggcaagaacaggaattatttgatgatttt tgcaacagtcgtggtatagagagatttcaagcgtaccgccaaagcatcatgagtacaacatcgtctctgagtagttggga cgcttgtagcgttctgaattctgcaagttctctgctgaatcttccaaacactgccagcacccggtttggtcgagatccgt cattttcttcctccagttggagctcttcggagggagctaactcttacgaagatttaaatgactttgatgagacttaccca tctgtatcatatatcgatgatagcgagtctgatgattttgaagacgaattaaaaataggaaagtatgcacggaggggcac attgaaacaggaggactcggatttatctcttacaaattatttttcaagtgcagaagagagagaaaggagggatactttag ttatgggacaagacaatgatttagatgttgtggacatcggcagtgatattgatgtaacaaagaactcacatacacaatgc gatgttaataatggtaccgaaaaaggtttaatcttttcctttaagaatattgaaagttctacattagatcaatcaaatga tttatcccatgcggaaaataataataatctaaaggaaattgcagactcatattcagcgaattctggaagttttgaatcaa ataatacagaatgcttaggaatagaaattgaagatataagtgtaaaaaatggattgcatgatgccagtatgacacaaata tctactataatccaagattctgaaactcttcagtgtagtagagaacaggaaatggaagaacctggaggatcagtggaagg tgttcataaaagattcagcactgtgcaagtcaacaacacaacttgtgtatctgctgacgatacagtcattatatcgtttg tgtcagaaggtgaaatacatataaacgagagagatgaatgctctaaactttag |
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Protein
| Protein ID | pfu_aug2.0_228.1_27068.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27068.t1 MKSRTHSFGADLDDLETERSIVFDIEDNRKRRTIQLIREGGSCGFTVQTYGIKNKKTREIEVFTFVDYVEVTGPAQRAGL RKGDIILSVNGKNVEFATHRELVETIQNSGDRIRMVVLFVDCCRKVELYDRLIKLKKLLSVKVNEYRDLERQEQELFDDF CNSRGIERFQAYRQSIMSTTSSLSSWDACSVLNSASSLLNLPNTASTRFGRDPSFSSSSWSSSEGANSYEDLNDFDETYP SVSYIDDSESDDFEDELKIGKYARRGTLKQEDSDLSLTNYFSSAEERERRDTLVMGQDNDLDVVDIGSDIDVTKNSHTQC DVNNGTEKGLIFSFKNIESSTLDQSNDLSHAENNNNLKEIADSYSANSGSFESNNTECLGIEIEDISVKNGLHDASMTQI STIIQDSETLQCSREQEMEEPGGSVEGVHKRFSTVQVNNTTCVSADDTVIISFVSEGEIHINERDECSKL |
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