Gene
| Gene Model ID | pfu_aug2.0_228.1_27074 |
|---|---|
| Locus | scaffold228.1 : 274771 ... 315264 : - |
| To GenomeBrowser | scaffold228.1:274771..315264 |
| Genes list of scaffold | scaffold228.1 |
| Synonym | pfu_aug1.0_6097.1_16842 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_228.1_27074.t1 | 2 | 1 | Transglut_core | 53 | 153 | 1.8e-11 | 44.2 | 3.3e-10 | 7.0e-07 | 29.4 |
| pfu_aug2.0_228.1_27074.t1 | 2 | 2 | Transglut_core | 843 | 888 | 1.8e-11 | 44.2 | 6.6e-05 | 0.14 | 12.3 |
Transcript
| Transcript ID | pfu_aug2.0_228.1_27074.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27074.t1 atgcacgcaccgtacaacttccagctctccagcgtccaagggaggaaacttcccccaccactaaggtcaaggtacagaaa gttcgacctctacagggacgtggggcagttcagagtcattgataaccatgctattacagaattgcagttttccgtaaact cagaactagaaaaagcgagagccatctttcgatggatgacctgcaagaatatgtacacaatcaactttgagtcggtgaaa tctgggactccagaagatgtgctcacttcattcaagaacaagaaaggcacttacgcaagaatatttgaaaccatgtgcaa ccatgcaggtctgtactgtgccgtgctgactgggtttgccaagggactggactacagacccggagacgagttcaaaggaa ccgaatacaatcatagctggaatgctgtttatgtagacgacaattggtatctggtggactcacactgggcaactcgatac ctcatctcagagaaaaatatgccggaaaatctggtgtacgaatatgatgacttctacttcctgacagaccctgagcaact tatttatagtcactggtcccagaaagagccgtggcaactgctctcccgtcccctttccctcaaggaatttgaagatttgc cgttggtgaagtcctacttcttcaagtgcggcatgtacttcatgtctcatcagaaaggagttgtcagcacaaagaaaggc cggatcgcacttacactagggtttgtgaaaccaaccaacttcacctataaaattgtttttgcggaaaatggtgatgaaat gcataacggaaataaactgaaaagttacgccttacaggagactggttacaatgaggtcacatttatgttgcgtgctccga aaacgggggcatactatttcaccatctttgcccaattactgacgggagatattggagtaaagaacatctttactgcatcg gctgagtacaaagtgatcgcagaccagcaatccagcgatgccgtgcctctgccgaattgttccgacagtaactggggacc tggagtgtacgaatatgacgacttctactttctgacagaccctgagcaacttatttatagtcactggtcccagaaagagc cgtggcaactgctctcccgtcccctttccctcaaggaatttgaagatttgccgttggtgaagtcctacttcttcaagtgc ggcatgtacttcatgtctcatcagaaaggagttgtcagcacaaaaaaaggccggatcgcacttacactagggtttgtgaa accaaccaacttcacctataaaattgtttttgcggaaaatggtgatgaaatgcataacggaaataaactgaaaagttacg ccttacaggagactggttacaatgaggtcacatttatgttgcgtgctccgaaaacgggggcatactatttcaccatcttt gcccaattactgacgggagatattggagtaaagaacatctttactgcatcggctgagtacaaagtgatcgcagaccagca atccagcgatgccgtgcctctgccgaattgttccgacagtaactggggacctggagtgcctgttgaccagttgggactag aaccaacttgcaaagatgctgttttgacaacatcggatggaaagataagtctggaatttaaaaagaatagaccggcttac attctgtgtaaattacgcaaccccaacatgcgagatgcggatctagagcgatgtatcaaagaaagcgaccagggtgatag aattctggttttggctcagctccctgctcccggagaatatggcctggaaatttacggcaacgatccagccaaggacggcg acacgtacactcatatctgccagtattttgtacactatgcgtcgccggacgaccagagcaaggcgttctaccaggaggct cccaggagagttaccgcccctgcatcccaacaagcatacatcacaaacggttacaacccagattctgccgagatgaacca gcagtttgccaacatgaacatgggtgcccccgcctaccaaggggaaatggacatggagaacctcccacctcccccgcccg agctcctccaacaacagtacctgtacggtagcgtaccagacagtcgacatcagggcgcgtacagtcagtttgccccatct caggggcaaggtacttacggatacacccccggggaaggatacgtggccatgccccctcaacagaaagccacagtggttaa tgtacagccaagcaaacccatacaggtcgagaagagatcgatgggtgatgagcctccagtagccccacagaccttcaaac tgatccctgtaaagaaggaagataccaaggcccctccccctgaaccagcccccgcctcacaccagaaaccaaccctggag tccatggagcgtaaagtactgcacacagtagacgatcatgctatacaggtaaagagaattcagatcttagtggaagtttc tgttttcatggctttcattatgttcaaaattttcactttcagttatgctggcctgcattcaaagataatcagtggatttg ccaaaggtgcggactacaaacccgggcagcagtttactcctggcagtaaccaacattcctggaatgccgtctatatctac ggcacatggtgcctagttgatgcccactgggctgccaggcgaatcatcggcaagcaggctactgtagaggagttccatta tcagcttgacgagtatttcttcttgcccgatcctcaccagctcatttatactcactatcctgatgactcccagtggcagc tgcttgaacgcccggtggttctggaggagttcgaaaatatgccacacatgaaaccacagttctttaaatacggcttggag ttcgtaagtcatcgtactgcggtgatcacaggcaggggagaagtcaatgtacggttacgttaccccgcacagaaatttat cgtagcatttaactttactattcaatatgaaaatggtgaggaggaatgtcgcagtgtgaaattaaatcgttacggcatgc aagaaagtgtaggtggaattgcgtcgtttaggttacggttaccggagaaaaactcttacattctgtatatttatgccaag gaggatacacccgagaacaaagacaatgtatacgcccaagtgtgtgaatacaaaatagttcaagaagaatgctgcagccc tccccccgagcccttccctccatgtgcatatttgaattggggaccaggcactagtttcttcaaatataggttagctacgt accaacaaacggcccaggttataaccagggaaggaaaggcagaattgcaaattaaaatacctaaatccatgcagtttatg gccaaactgaagtcggagcaccactcagatagcgaattagagggctatgtcatgacgaggactgtaggtaacactgttta tttcaatgttaccgcaccgtcgagaggtgaatttggacttgaaatgtatgcaaatgatcctgctactgagggatcaacgt tatatcatgtagcgcaatatctgatagaatgtcatgaggatgtcaaggcggtacctttgccgaaactgccagcaggttac ctcggagctcagccaagatttaatgagtttggattgcagaccctaagccatcatgacccagttatccatttagatggcaa caagctagaaattcagtttgccgtcagtcaagaaatgagggtgacggcaaatttgatagaggtcgaaaaggagaaagatt acccagaatttgttttcacgcaaacgcaagggtctgttgttagcttcatggtttccatgcctaacgttggattttacaag ttgcaactctacgccataccatccaatgatacgagccagcagttaccgggtgtgtacaactacttggtcaactgtaaaag ttcccaagggacgtgcgtcccctaccccaagcaatacgcccaatggaaggagggatgctacatgtggtccccactctgca ttcacaaatcactaggtcaacccaaggtcaacttcaaggtcagtatccctaaagcagaggccgttgctgtagtaactgat tcagagtggacacatcttcaaagcgttcagccaggtatttggacgggagaggtagaagttggcaaatatttcgaaagagg atgtaaagtcacgctaaacgccaactacgggggcgatagaacaaattacgctactctcttagagtacaacatttaa |
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Protein
| Protein ID | pfu_aug2.0_228.1_27074.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27074.t1 MHAPYNFQLSSVQGRKLPPPLRSRYRKFDLYRDVGQFRVIDNHAITELQFSVNSELEKARAIFRWMTCKNMYTINFESVK SGTPEDVLTSFKNKKGTYARIFETMCNHAGLYCAVLTGFAKGLDYRPGDEFKGTEYNHSWNAVYVDDNWYLVDSHWATRY LISEKNMPENLVYEYDDFYFLTDPEQLIYSHWSQKEPWQLLSRPLSLKEFEDLPLVKSYFFKCGMYFMSHQKGVVSTKKG RIALTLGFVKPTNFTYKIVFAENGDEMHNGNKLKSYALQETGYNEVTFMLRAPKTGAYYFTIFAQLLTGDIGVKNIFTAS AEYKVIADQQSSDAVPLPNCSDSNWGPGVYEYDDFYFLTDPEQLIYSHWSQKEPWQLLSRPLSLKEFEDLPLVKSYFFKC GMYFMSHQKGVVSTKKGRIALTLGFVKPTNFTYKIVFAENGDEMHNGNKLKSYALQETGYNEVTFMLRAPKTGAYYFTIF AQLLTGDIGVKNIFTASAEYKVIADQQSSDAVPLPNCSDSNWGPGVPVDQLGLEPTCKDAVLTTSDGKISLEFKKNRPAY ILCKLRNPNMRDADLERCIKESDQGDRILVLAQLPAPGEYGLEIYGNDPAKDGDTYTHICQYFVHYASPDDQSKAFYQEA PRRVTAPASQQAYITNGYNPDSAEMNQQFANMNMGAPAYQGEMDMENLPPPPPELLQQQYLYGSVPDSRHQGAYSQFAPS QGQGTYGYTPGEGYVAMPPQQKATVVNVQPSKPIQVEKRSMGDEPPVAPQTFKLIPVKKEDTKAPPPEPAPASHQKPTLE SMERKVLHTVDDHAIQVKRIQILVEVSVFMAFIMFKIFTFSYAGLHSKIISGFAKGADYKPGQQFTPGSNQHSWNAVYIY GTWCLVDAHWAARRIIGKQATVEEFHYQLDEYFFLPDPHQLIYTHYPDDSQWQLLERPVVLEEFENMPHMKPQFFKYGLE FVSHRTAVITGRGEVNVRLRYPAQKFIVAFNFTIQYENGEEECRSVKLNRYGMQESVGGIASFRLRLPEKNSYILYIYAK EDTPENKDNVYAQVCEYKIVQEECCSPPPEPFPPCAYLNWGPGTSFFKYRLATYQQTAQVITREGKAELQIKIPKSMQFM AKLKSEHHSDSELEGYVMTRTVGNTVYFNVTAPSRGEFGLEMYANDPATEGSTLYHVAQYLIECHEDVKAVPLPKLPAGY LGAQPRFNEFGLQTLSHHDPVIHLDGNKLEIQFAVSQEMRVTANLIEVEKEKDYPEFVFTQTQGSVVSFMVSMPNVGFYK LQLYAIPSNDTSQQLPGVYNYLVNCKSSQGTCVPYPKQYAQWKEGCYMWSPLCIHKSLGQPKVNFKVSIPKAEAVAVVTD SEWTHLQSVQPGIWTGEVEVGKYFERGCKVTLNANYGGDRTNYATLLEYNI |
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