Gene
| Gene Model ID | pfu_aug2.0_228.1_27077 |
|---|---|
| Locus | scaffold228.1 : 349244 ... 356454 : - |
| To GenomeBrowser | scaffold228.1:349244..356454 |
| Genes list of scaffold | scaffold228.1 |
| Synonym | pfu_aug1.0_301.1_14966 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_228.1_27077.t2 | 1 | 1 | PHF5 | 78 | 159 | 2.3e-34 | 117.6 | 7.0e-38 | 3.4e-34 | 117.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_228.1_27077.t2 | gi|640781926|ref|XP_008046582.1| | PREDICTED: PHD finger-like domain-containing protein 5A isoform X2 [Tarsius syrichta] | 0.0 |
| pfu_aug2.0_228.1_27077.t2 | gi|699250162|ref|XP_009860839.1| | PREDICTED: PHD finger-like domain-containing protein 5A isoform X2 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_228.1_27077.t2 | gi|669284380|ref|XP_008634853.1| | PREDICTED: PHD finger-like domain-containing protein 5A [Corvus brachyrhynchos] | 0.0 |
| pfu_aug2.0_228.1_27077.t2 | gi|690422674|ref|XP_009320940.1| | PREDICTED: PHD finger-like domain-containing protein 5A [Pygoscelis adeliae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_228.1_27077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27077.t1 atggcaaagcatcatcccgatctaatcttttgtagaaaacaacctggagtcgctattggaagattatgtgaaaaatgtga tggtaaatgtgtgatatgtgattcctatgtgcgtccgtgtacgttagtgaggatatgtgacgagtgtaactatggttcat atcagggaaggtgtgtcatctgtggtgggccgggagtatcagatgcctattactgtaaagagtgcactatcatggagaaa gatagagacggatgcccaaaaattgtaaaccttggaagtgctaaaacagacttattctatgaaaggaagaaatatgggtt caagaagaggtga |
|
| Transcript ID | pfu_aug2.0_228.1_27077.t2 |
| Definition | - |
>pfu_aug2.0_228.1_27077.t2 atggggaaaaagggcatgtccaatcaacacggtcacagtttactcagaaaacaacctggagtcggtatgattatttattt ttattataattcattggataatcaagctttgactgttaatgccaattttaaagttttccagataatctgtaagttcgagg accggggcgaggaaattcgagctgttctgttcgcagaactcgagaacattttcctcttttccagaattgattgttttgta ggtgatggtaaatgtgtgatatgtgattcctatgtgcgtccgtgtacgttagtgaggatatgtgacgagtgtaactatgg ttcatatcagggaaggtgtgtcatctgtggtgggccgggagtatcagatgcctattactgtaaagagtgcactatcatgg agaaagatagagacggatgcccaaaaattgtaaaccttggaagtgctaaaacagacttattctatgaaaggaagaaatat gggttcaagaagaggtga |
|
Protein
| Protein ID | pfu_aug2.0_228.1_27077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27077.t1 MAKHHPDLIFCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIMEK DRDGCPKIVNLGSAKTDLFYERKKYGFKKR |
|
| Protein ID | pfu_aug2.0_228.1_27077.t2 |
| Definition | - |
>pfu_aug2.0_228.1_27077.t2 MGKKGMSNQHGHSLLRKQPGVGMIIYFYYNSLDNQALTVNANFKVFQIICKFEDRGEEIRAVLFAELENIFLFSRIDCFV GDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIMEKDRDGCPKIVNLGSAKTDLFYERKKY GFKKR |
|