Gene
| Gene Model ID | pfu_aug2.0_228.1_27080 |
|---|---|
| Locus | scaffold228.1 : 386372 ... 395343 : - |
| To GenomeBrowser | scaffold228.1:386372..395343 |
| Genes list of scaffold | scaffold228.1 |
| Synonym | pfu_aug1.0_82532.1_20563 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_228.1_27080.t1 | 2 | 1 | I-set | 96 | 148 | 8.3e-06 | 25.5 | 1.5e-07 | 0.00043 | 20.0 |
| pfu_aug2.0_228.1_27080.t1 | 2 | 2 | I-set | 191 | 219 | 8.3e-06 | 25.5 | 0.034 | 100.0 | 2.8 |
Transcript
| Transcript ID | pfu_aug2.0_228.1_27080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27080.t1 atgcggaatcattcttatgcacgtttgacaaacatgactagagataacaaatcgttataccggcatacatgtaatacctg tgttgtggcgttacaggtatttgcaaattttgaagatgatgtcagtattgagatccaccccatcaccccttaccttggag acaaagatgttgttatccgatgtgataccagtggcgacatcatcaaagaacctgcctttttatctgtttatcttgaaaca acgttctctagcaatacaccacttgtgacattggccaaatatgcatcaaccatgaaaatagaatggggaagacactacga tgatgcctttcaagtcagcaaacgtatgaatgtaacgggaaggattgggaagcctggtgaagactttatggagttgacaa ttagtaatgtgctgtgctcagacgaggggaagtatcagtgtgtgtatgctgggaaggacgatgaggggaatcttgatgaa gttacaaagaaaggagaactgattgtttattcttatcacggtatgcctcagattaccttgaacggcaagccccaccctgt agattacataccaatagtactgaagcccggggatgaggtagatctagaatgtgagggcagtgtaggaaagccaccggtcc ctatggcttgggcagtccattacatgcgcaaagatagaaattacagaaagattgaggaagaagagggaatagtcggaaat gttttccgtgagattccagagggcgacctgtgcaggttcagatccaaattaccactgaagtttacaatgccagatattcc caatgacattatcagcattaaatgccagactggattctcgtctgctgtcgtccagttcaggaatactttaccatatgggc gaccattagtacctgctcataaaagttccagactgaaagacgaaccagttgtgattctagatgataccaacgacgtcgct gatttaagaccaaggtttctgcttttcctgacagcgtacgtggtgatcagaatggtgcacgtgactttgtga |
|
Protein
| Protein ID | pfu_aug2.0_228.1_27080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_228.1_27080.t1 MRNHSYARLTNMTRDNKSLYRHTCNTCVVALQVFANFEDDVSIEIHPITPYLGDKDVVIRCDTSGDIIKEPAFLSVYLET TFSSNTPLVTLAKYASTMKIEWGRHYDDAFQVSKRMNVTGRIGKPGEDFMELTISNVLCSDEGKYQCVYAGKDDEGNLDE VTKKGELIVYSYHGMPQITLNGKPHPVDYIPIVLKPGDEVDLECEGSVGKPPVPMAWAVHYMRKDRNYRKIEEEEGIVGN VFREIPEGDLCRFRSKLPLKFTMPDIPNDIISIKCQTGFSSAVVQFRNTLPYGRPLVPAHKSSRLKDEPVVILDDTNDVA DLRPRFLLFLTAYVVIRMVHVTL |
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