Gene
| Gene Model ID | pfu_aug2.0_2280.1_02075 |
|---|---|
| Locus | scaffold2280.1 : 21330 ... 31905 : - |
| To GenomeBrowser | scaffold2280.1:21330..31905 |
| Genes list of scaffold | scaffold2280.1 |
| Synonym | pfu_aug1.0_431.1_29240 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2280.1_02075.t1 | 1 | 1 | NACHT | 73 | 241 | 2.6e-13 | 49.9 | 1.1e-15 | 3.1e-12 | 46.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2280.1_02075.t1 | gi|260795174|ref|XP_002592581.1| | hypothetical protein BRAFLDRAFT_68903 [Branchiostoma floridae] | 2.0e-08 |
| pfu_aug2.0_2280.1_02075.t1 | gi|260791502|ref|XP_002590768.1| | hypothetical protein BRAFLDRAFT_78182 [Branchiostoma floridae] | 5.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_2280.1_02075.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2280.1_02075.t1 atgtcaccattagatagacgaagcaatataacattttctcagatgttcgtaccgccagtagtgcagtttgattcatgctg ttcaaatgataacaaatgcataccagataagggctttgaagaaaataaaacaactgctttgggatcagagaagatatctt gtggggagcatgaaagcaagggcgatttcattgatattttcaatcaaaatagtaaacggattttcttgcttggagatgct ggaatcggtaagacaacgtactgtaaatggctccttcaactatggtgtaaaaaagaggaagacggaatttttgaatctga aaaatcaaacccattacaaaagtctttgaagaaatttgatttcgtatttttcattcccttagaaagatataaagattcca taaaaacattagatgatattatctgtgaagaggtccttggggtagactattatctacacaatgaattgaggaaagtttta tcaagtaatagatatcactgtctaatacttattgatggtgccggggaatggaatccctacgaatcagttagaatgttgtc tcgatctgagggaattccaaatctaggaaagttatcaaattgtactatacttatcacttcgcgaccatcagaattccatg atttagacatggcacgtaactctgttgccgtctttcggatactcggcctggatacaaatggagcaaaatcattcgcaaac aaacttgaacaacatctacattcggagtttgactcaaaattgtatgatgatattttgaaaacaatacaagagatcgaaat gcccactgacgttgaattcacggttaacccactgcttgtttcaactgtcattcaaatgatgtatcaaaccgaaacaaagg aagatacgttcacagtttctttgataaagttcattagccttctcatagagatagcagaacaaaagcatggacatcataat gactccaaagttctgatgaaaaatacaaatggactgaatctgcctgtgcaggaaaattatcactttttaaagagcattgc actcttacaaaatttaggaaaaacagcgtacaatggaacgcttccaagacaataccaaacagacacactagtattcagtc tcggactcacagaatcagagcttgcatttgcattgaacgtaggcttactcatcaaagaggatgcagacggtgtccttaca agaaaagtaaacattcgctttttgaattcttgtatcaaagacctgttaggcgccgtctatattgttggcaagaaggaaaa ttcagtgggcgaggaacggtctgcaaccaaattgtcatcgatgtcaagatttgcaaaaatcctccaaagatacattgcgg aagaaattgaaaatgactttggagaaagaaaagaccgtgaatcaagtaatgaagtaatccataatgtcaaacttcaaaca ttaagccagaatagcctccatttgccagggtaa |
|
Protein
| Protein ID | pfu_aug2.0_2280.1_02075.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2280.1_02075.t1 MSPLDRRSNITFSQMFVPPVVQFDSCCSNDNKCIPDKGFEENKTTALGSEKISCGEHESKGDFIDIFNQNSKRIFLLGDA GIGKTTYCKWLLQLWCKKEEDGIFESEKSNPLQKSLKKFDFVFFIPLERYKDSIKTLDDIICEEVLGVDYYLHNELRKVL SSNRYHCLILIDGAGEWNPYESVRMLSRSEGIPNLGKLSNCTILITSRPSEFHDLDMARNSVAVFRILGLDTNGAKSFAN KLEQHLHSEFDSKLYDDILKTIQEIEMPTDVEFTVNPLLVSTVIQMMYQTETKEDTFTVSLIKFISLLIEIAEQKHGHHN DSKVLMKNTNGLNLPVQENYHFLKSIALLQNLGKTAYNGTLPRQYQTDTLVFSLGLTESELAFALNVGLLIKEDADGVLT RKVNIRFLNSCIKDLLGAVYIVGKKENSVGEERSATKLSSMSRFAKILQRYIAEEIENDFGERKDRESSNEVIHNVKLQT LSQNSLHLPG |
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