Gene
| Gene Model ID | pfu_aug2.0_2280.1_02076 |
|---|---|
| Locus | scaffold2280.1 : 41429 ... 74575 : - |
| To GenomeBrowser | scaffold2280.1:41429..74575 |
| Genes list of scaffold | scaffold2280.1 |
| Synonym | pfu_aug1.0_5808.1_38223 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel subfamily h member 8-like | GO:0000155 GO:0000160 GO:0005249 GO:0016021 GO:0023014 GO:0071805 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2280.1_02076.t1 | 1 | 1 | PAS_9 | 22 | 116 | 7.6e-18 | 64.8 | 1.3e-20 | 1.7e-17 | 63.6 |
| pfu_aug2.0_2280.1_02076.t1 | 1 | 1 | PAS | 24 | 115 | 3.1e-07 | 30.1 | 5.9e-10 | 8.0e-07 | 28.8 |
| pfu_aug2.0_2280.1_02076.t1 | 3 | 1 | Ion_trans_2 | 278 | 298 | 1.1e-10 | 41.1 | 2.9 | 3900.0 | -2.4 |
| pfu_aug2.0_2280.1_02076.t1 | 1 | 1 | Ion_trans | 330 | 533 | 1.2e-15 | 57.2 | 1.5e-18 | 2.0e-15 | 56.5 |
| pfu_aug2.0_2280.1_02076.t1 | 3 | 2 | Ion_trans_2 | 425 | 438 | 1.1e-10 | 41.1 | 6.3 | 8500.0 | -3.5 |
| pfu_aug2.0_2280.1_02076.t1 | 3 | 3 | Ion_trans_2 | 484 | 539 | 1.1e-10 | 41.1 | 7.8e-14 | 1.1e-10 | 41.1 |
| pfu_aug2.0_2280.1_02076.t1 | 1 | 1 | cNMP_binding | 638 | 720 | 3.6e-09 | 36.3 | 6.9e-12 | 9.3e-09 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2280.1_02076.t1 | gi|676437216|ref|XP_009048131.1| | hypothetical protein LOTGIDRAFT_139826, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2280.1_02076.t1 | gi|512893750|ref|XP_004923257.1| | 0.0 | |
| pfu_aug2.0_2280.1_02076.t1 | gi|642934069|ref|XP_008195970.1| | PREDICTED: potassium voltage-gated channel subfamily H member 8 isoform X4 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_2280.1_02076.t1 | gi|734632701|ref|XP_010744797.1| | PREDICTED: potassium voltage-gated channel subfamily H member 8-like [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_2280.1_02076.t1 | gi|498997145|ref|XP_004533530.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2280.1_02076.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2280.1_02076.t1 atggcaaagtgttataagttactgctaaacaattttgtgttaggaaacgcccagacgaatggttgtcctatagtttactg ctcagatggattctgtgagttgaccggatattcccgtgctcacgtgatgggaaagagctgcgcatgccgctttctatacg gggacagcacggatactggtgaaaaagccaaaattgacgaagcattagatatgaaaaaagaactcaaaacagaaattcta ctttactcaaaaactggaggaacattttggtgtttactggacatcgtacctataaaaaacgagaaaagtcaggtagttct atttttggtatctcacaaggatatcacaagagatcgatcatcgtcagcgggtatccctataagagaatctgctgactcag gctcttatgttaaatccaagttagtatcggagtcactgagatgcctagcaaccttttctatgaccacgcctgacgacaag acagataattctaccggctcagattctaaaaatccatatggattctacaagcttttgaatatagattttctgtcagcagg tccagatgacacttttcggccgccatttggtcggggtagagaggagccagagcttccgtccaactgtaactatcagagga ggcgaagtagagccgtactgtaccatttatctggacagtttgacaagcagaataaagcaaaaagcaagcttcaacaactc aataagctcactggttccatatcaggaaaaatgccagagtataaagtccaggaagtaaagaagtctaaatacataatagc acattacgggatatttaagattggctgggattggcttatactgctctgtactttctatactgccattatggtgccataca acgctgcttttactgtagttaaaggcccggatgatcaggaagctggttcatccaacatgacctctaccaccaaacaaagg tcaaccatgaaggattctatctatcctgacgttgtcgttgaaattttgttcatgatagatatagtgctgaactttaggac ttcttttctgtcaaagagtggacagatagtgtatgcttccaggctgattgttattaattacgtcaagggctggtttctcc tagacttgttagctgccattccgtttgacttcctcattctacttgacgtcactacgactacacctgttcatttgctcaaa atagcccggatgctgcgtcttgcccgcctgctccagaagatagatcgttattcccagtacagtgccatgattgtagcgtt atttatgtgtatgtttactctgctagcccattggctagcctgtgtgtggtatgctataggtaaaggagaactagaggact ccagacctgattggtcagtcggttggttattcgaattaggtgaaagaattgaaaagcctgtgaacagaacaaatcccccg gatgttctgacatcatacatcactgcgctgtatttcacgtgctcaagtctgaccagtgtagggtttggtaacgtctcagc caatactaatgctgaaaaggtcttctctgtttgtgctatgcttataggagctatgatgcatgccgtagttttcggaaacg tcaccgctattatccagcggatgtatgctcgacgtgctaattatcactccaagaccaaagatttaaaggacttcttcagg acacatcacataccaaagaggctgaagcataggatgcaagaatacttccaaaccatgtggtcaatgaacaatggaataga cactgctgatattttgaaggacttcccagatgaactgagaggggagataaacctccatttacacaaagacattcttaagt taccaatatttgatatttctccccaaggctgtctgaagtcaatttctctacacacaaaaagggcattttctgctcctgga gaattcctagttcataaaggagatgccgttaattacgtgtacttgttatgtagtggatcaatggaggtcttaaaggagga attagttgtagcaatattaggtaaaggtgatttatttgggactgatattaattttgacgatcctattgccatatctagct gtgacgtacgctccctgacgtactgtgaactacaatgtattcatatgaagggacttactgacgtactgtcattgtacccg gactttgctgaaaagtttgctcaagatatacgacatgacctcacttataacctaaaagaaaattacgaagaatctgagag tgaaggggaatatttgccagttggtagagtcaaaaccctcccttccatatccgaagatgaggaggaagagtcagatagtg ataacgtattcagtgacaaaaccaagtccccaaacacccccaccacgtcacctaaagccaatagtaaagacaccagtcca ttgttaggggataaaaaagaaaaggagttcacatttcaaatacctaacggagacattcccatgagtccaagagaaacgcc acttcgaagtagaagacgcacgtccatattaccccctgccagatcatcgagccgagatcggaaaagacaaaggcattcct caaaacaagcatcgtctcagccggaaacaccggtgagtgttagcggtatggagggtctatcagcctctgttcacagccta catacagaaatagagaccaccaagtccaatatgaaacagatggagaagaaaatcagtgacatgtcgttagaattgtcaag catcgatcgcagcataaaaacagtgattggaatgttgtcaccaaaccctagcgttcattcgatggagtccactgatcact ctttcccgccttacattaaaccacatttttctatcagttcaccgaatagtgatgagtttttctctgacactgatgtaaat cgcacaagctgtagcacccttgaggttccttcaaccttgtataaaaagccggagtctcctagtgttcgtgatagatttaa caaaggttgtcatggtaataaacatggcggtaggtctcactcggctaaatgtttacatacactaagcgacgctggacatg atgcggacaatcaggctgagtctattaatgtgtgtgacaaaacaacagatcgggtgtctcctgagataaaactacccaca ctggaggggatatataagtacaacaaagatgataatgaccaaagcgggcacttagtgacccctgaaagggttatcaggca taaacagaccaaagtgtatagaagagccgagtccgaaccccggacatttaacggactgagcgaagcaactcggcagaaaa ttcttaaagaagtttccctggacgatattggtagcaaaaataataacattccgagagtaaaatctagaaattatccgagt agagacaataatagttttcttgaaaccacagatctgtga |
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Protein
| Protein ID | pfu_aug2.0_2280.1_02076.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2280.1_02076.t1 MAKCYKLLLNNFVLGNAQTNGCPIVYCSDGFCELTGYSRAHVMGKSCACRFLYGDSTDTGEKAKIDEALDMKKELKTEIL LYSKTGGTFWCLLDIVPIKNEKSQVVLFLVSHKDITRDRSSSAGIPIRESADSGSYVKSKLVSESLRCLATFSMTTPDDK TDNSTGSDSKNPYGFYKLLNIDFLSAGPDDTFRPPFGRGREEPELPSNCNYQRRRSRAVLYHLSGQFDKQNKAKSKLQQL NKLTGSISGKMPEYKVQEVKKSKYIIAHYGIFKIGWDWLILLCTFYTAIMVPYNAAFTVVKGPDDQEAGSSNMTSTTKQR STMKDSIYPDVVVEILFMIDIVLNFRTSFLSKSGQIVYASRLIVINYVKGWFLLDLLAAIPFDFLILLDVTTTTPVHLLK IARMLRLARLLQKIDRYSQYSAMIVALFMCMFTLLAHWLACVWYAIGKGELEDSRPDWSVGWLFELGERIEKPVNRTNPP DVLTSYITALYFTCSSLTSVGFGNVSANTNAEKVFSVCAMLIGAMMHAVVFGNVTAIIQRMYARRANYHSKTKDLKDFFR THHIPKRLKHRMQEYFQTMWSMNNGIDTADILKDFPDELRGEINLHLHKDILKLPIFDISPQGCLKSISLHTKRAFSAPG EFLVHKGDAVNYVYLLCSGSMEVLKEELVVAILGKGDLFGTDINFDDPIAISSCDVRSLTYCELQCIHMKGLTDVLSLYP DFAEKFAQDIRHDLTYNLKENYEESESEGEYLPVGRVKTLPSISEDEEEESDSDNVFSDKTKSPNTPTTSPKANSKDTSP LLGDKKEKEFTFQIPNGDIPMSPRETPLRSRRRTSILPPARSSSRDRKRQRHSSKQASSQPETPVSVSGMEGLSASVHSL HTEIETTKSNMKQMEKKISDMSLELSSIDRSIKTVIGMLSPNPSVHSMESTDHSFPPYIKPHFSISSPNSDEFFSDTDVN RTSCSTLEVPSTLYKKPESPSVRDRFNKGCHGNKHGGRSHSAKCLHTLSDAGHDADNQAESINVCDKTTDRVSPEIKLPT LEGIYKYNKDDNDQSGHLVTPERVIRHKQTKVYRRAESEPRTFNGLSEATRQKILKEVSLDDIGSKNNNIPRVKSRNYPS RDNNSFLETTDL |
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