Gene
| Gene Model ID | pfu_aug2.0_2284.1_15472 |
|---|---|
| Locus | scaffold2284.1 : 10156 ... 19455 : + |
| To GenomeBrowser | scaffold2284.1:10156..19455 |
| Genes list of scaffold | scaffold2284.1 |
| Synonym | pfu_aug1.0_11346.1_68320 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2284.1_15472.t1 | 3 | 1 | Ank_2 | 161 | 179 | 1.9e-09 | 37.7 | 1.2 | 2900.0 | -1.4 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 1 | Ank | 167 | 177 | 2.8e-07 | 30.0 | 1.3 | 3200.0 | -1.8 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 1 | Ank_3 | 167 | 182 | 2.2e-06 | 27.3 | 0.28 | 680.0 | 1.0 |
| pfu_aug2.0_2284.1_15472.t1 | 3 | 2 | Ank_2 | 310 | 386 | 1.9e-09 | 37.7 | 2.0e-05 | 0.048 | 13.9 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 2 | Ank | 334 | 351 | 2.8e-07 | 30.0 | 0.0022 | 5.5 | 6.9 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 2 | Ank_3 | 334 | 351 | 2.2e-06 | 27.3 | 0.021 | 53.0 | 4.4 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 3 | Ank | 362 | 384 | 2.8e-07 | 30.0 | 3.8 | 9400.0 | -3.3 |
| pfu_aug2.0_2284.1_15472.t1 | 3 | 3 | Ank_2 | 422 | 467 | 1.9e-09 | 37.7 | 3.4e-07 | 0.00084 | 19.6 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 3 | Ank_3 | 422 | 435 | 2.2e-06 | 27.3 | 6.0 | 15000.0 | -3.7 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 4 | Ank | 440 | 467 | 2.8e-07 | 30.0 | 4.2e-07 | 0.001 | 18.7 |
| pfu_aug2.0_2284.1_15472.t1 | 4 | 4 | Ank_3 | 440 | 467 | 2.2e-06 | 27.3 | 3.9e-06 | 0.0097 | 16.0 |
Transcript
| Transcript ID | pfu_aug2.0_2284.1_15472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2284.1_15472.t1 atgcttgttatattattccctaatggatatgagatcaggtgcccgggaacaggtgataaaattgatggaatgatggagct tagtggtattgacccagagtcaaacaaggtgtcggaacttcttactaccatttggacaaagactgatgacgaaatactaa cttttctatgcaggaacaaacgcttccttgatcgcaacgtgaagttcagtgcatgtccgcatgctgtttctgttttcaat ggagacagtggacgtgtgacggcatcgtttcttcaatgcaggatggcggattattatgttgatcccgacttagatttgaa ttataatgctgatattgtgaagtctacctctcttgaattgtttcgtcgcacagatgttttactgttagcaggttcttact tggagcatattttgttacgtatagggaaaatccgtctacttacacgcattatgaatgatcatttcccgaaaaagaagcgg tttcgtaggacattcaaacatggatgtactgtcttgcaacttgcactccatttggacgaaattgaatttttcatgtctga ttttaaacagaaaacaaaaagaggaaagggaacattgcttaataattgtagaatgttaatgtgcgaattcagtcgactag agaatgatcacattttaaatctgtcgatgtcaacgaattcgttaaaagctttctgtaagacactcaaggcgctgaagaag atccaggggttggatagatttcgcacacaacagaaattattgcaaaggactttatggacaagcgttatagattcaaaggt agaatatacaaggattttactacagtctaataccataaattttaagccactgtacaatccgtcaggagaaggatataaag aacttggcttatcaaaattgattaaaaatgacaacaacgaagtcntgtgtcaacaactaatacgcgcctttaacagattt tacaaaggggagaaggtaaaggaaattgacgtctacgcactagcagttttacaggataacactgaagtccttaaaattct aatagatcataaagtgccaacttttcacatggaccaagtgaaattcagtgctttggattttgctatttgtttccaacgag agaatcattgtcagatgttacgccgagcaggacatgacagtcttgaggataccgcagatacatccccactactggaactc cagaaacttgaagattactcttatccttatcacagaaagtgtacaagaacacttccgttagttaaattgatcgaagagtt aataattctcggattcaatgtgaattttgatgatcagaatggtataactcctgttcaaatggcgatcaagcgacaagact atgacacggtgagagtgttgttaaagaacggagctgatttgttccgtggacagagctttatggtgcagtatggaacgatg cgacttcttacagaaattttctactgcagtgtcgacatctttgatcatatagccacaattgtaaatgttgtaagacatat cacacatctaccaagaggtcctgcaaattgggcactgcagaagatagatagagaacagttgacctatgcctttataactg actgtatacatagtcatagtactttggacagggcggctctaaccaggtattacaaggagtttgactctcagcataacatg ataaggccattaggacagcagtgcagagagagacttagacgacattttggtagacatatccatggatttgtcaataagat aacaataccagagtcgataaaacgattcatattgcttttggatgaaattgatacttttcagtcaatgataagatggaaat taaataatgaatactgcgtctctctttattaa |
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Protein
| Protein ID | pfu_aug2.0_2284.1_15472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2284.1_15472.t1 MLVILFPNGYEIRCPGTGDKIDGMMELSGIDPESNKVSELLTTIWTKTDDEILTFLCRNKRFLDRNVKFSACPHAVSVFN GDSGRVTASFLQCRMADYYVDPDLDLNYNADIVKSTSLELFRRTDVLLLAGSYLEHILLRIGKIRLLTRIMNDHFPKKKR FRRTFKHGCTVLQLALHLDEIEFFMSDFKQKTKRGKGTLLNNCRMLMCEFSRLENDHILNLSMSTNSLKAFCKTLKALKK IQGLDRFRTQQKLLQRTLWTSVIDSKVEYTRILLQSNTINFKPLYNPSGEGYKELGLSKLIKNDNNEVXCQQLIRAFNRF YKGEKVKEIDVYALAVLQDNTEVLKILIDHKVPTFHMDQVKFSALDFAICFQRENHCQMLRRAGHDSLEDTADTSPLLEL QKLEDYSYPYHRKCTRTLPLVKLIEELIILGFNVNFDDQNGITPVQMAIKRQDYDTVRVLLKNGADLFRGQSFMVQYGTM RLLTEIFYCSVDIFDHIATIVNVVRHITHLPRGPANWALQKIDREQLTYAFITDCIHSHSTLDRAALTRYYKEFDSQHNM IRPLGQQCRERLRRHFGRHIHGFVNKITIPESIKRFILLLDEIDTFQSMIRWKLNNEYCVSLY |
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