Gene
| Gene Model ID | pfu_aug2.0_2287.1_25369 |
|---|---|
| Locus | scaffold2287.1 : 30716 ... 40807 : + |
| To GenomeBrowser | scaffold2287.1:30716..40807 |
| Genes list of scaffold | scaffold2287.1 |
| Synonym | pfu_aug1.0_24827.1_62332 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2287.1_25369.t1 | 2 | 1 | CBM_4_9 | 25 | 154 | 7.4e-10 | 38.9 | 8.6e-13 | 4.2e-09 | 36.4 |
| pfu_aug2.0_2287.1_25369.t1 | 2 | 1 | Glyco_hydro_10 | 213 | 260 | 2.6e-15 | 56.2 | 0.0021 | 10.0 | 5.0 |
| pfu_aug2.0_2287.1_25369.t1 | 2 | 2 | CBM_4_9 | 238 | 257 | 7.4e-10 | 38.9 | 0.47 | 2300.0 | -1.5 |
| pfu_aug2.0_2287.1_25369.t1 | 2 | 2 | Glyco_hydro_10 | 258 | 358 | 2.6e-15 | 56.2 | 3.2e-17 | 1.6e-13 | 50.3 |
Transcript
| Transcript ID | pfu_aug2.0_2287.1_25369.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2287.1_25369.t1 atgaggtctctttcttatagtccccgcgctctctttctttttgcgcaaatcattttggtgtcatctgcacaggaactgtt tcgcaatggcgattttgagaaaaatgcggactggtcgtgcgcgcgctgcagtattcagctaaattctgatagagtccatg gatcccacagctataagataacaaatagacaagtaaactggtccggactgcgccaaactgctgccattacttctggaaag agatacggtacacactgttacgtcaagcttctcaacatgccgacgggacacgcctatacgggtgtggagctactggcatc catacacactgaccacggtaaccgattccatcaggtggctctacatccctatgataaggtcagatatgactgggttaaac tggctggggacttcatagccgattcaggagctacctctgtacagatctacacacagatggatccatctatagacttcctt atagacgattgctccctacaggagataccagatgacaatagctggctgaccgaagcacaggccagaataaaccaaatcag gaaggcacccgtcagtataaatattgcaggttcatcacatagtaacggacactattctatcgagttggtccaggagaagc gagcctttgcgtggggcgccgccatcagggctaacatgatcaaagacgggagttctgcgtttgagaaattcctatataac aactttgaatgggccgtgtttttatactctatgaagtggacagaggtagagaggaacaaagcgtatcgagatcaagccat tcagttgaaaaaggaaggtgttcctatttatggcatgggtgttcaaggtcatttctatggtagcgacattgacatcgtcg gcttaaaatacagactagatctgctggcggaagcaggacttccgatctggatcacagagctgacgatacaggaacaagac gagaacaagaaagccaaggcccttgaaagcttaatgaccttgttttacagtcatccggcggtagagggcgttttgctgtg gggattctgggaccacgccatgaaaaacacagcggctgccataacaacggggtcaaatgtcacacccaatgctgcaggtc ttgtttaccaaagattgtacggtcaagactggaaaactgacttcagtcacgccatcagcagtcacggtccagtaactacc agtgctttcatgggagactactcactcaaagttaaaaataacaatcacgtgatccatacggagacctttaccctcgacaa agctggcaaaaaccttacaatacatctacaagattcacagcacgtatctcatattgcctttggttag |
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Protein
| Protein ID | pfu_aug2.0_2287.1_25369.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2287.1_25369.t1 MRSLSYSPRALFLFAQIILVSSAQELFRNGDFEKNADWSCARCSIQLNSDRVHGSHSYKITNRQVNWSGLRQTAAITSGK RYGTHCYVKLLNMPTGHAYTGVELLASIHTDHGNRFHQVALHPYDKVRYDWVKLAGDFIADSGATSVQIYTQMDPSIDFL IDDCSLQEIPDDNSWLTEAQARINQIRKAPVSINIAGSSHSNGHYSIELVQEKRAFAWGAAIRANMIKDGSSAFEKFLYN NFEWAVFLYSMKWTEVERNKAYRDQAIQLKKEGVPIYGMGVQGHFYGSDIDIVGLKYRLDLLAEAGLPIWITELTIQEQD ENKKAKALESLMTLFYSHPAVEGVLLWGFWDHAMKNTAAAITTGSNVTPNAAGLVYQRLYGQDWKTDFSHAISSHGPVTT SAFMGDYSLKVKNNNHVIHTETFTLDKAGKNLTIHLQDSQHVSHIAFG |
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