Gene
| Gene Model ID | pfu_aug2.0_229.1_30457 |
|---|---|
| Locus | scaffold229.1 : 1 ... 3185 : + |
| To GenomeBrowser | scaffold229.1:1..3185 |
| Genes list of scaffold | scaffold229.1 |
| Synonym | pfu_aug1.0_58664.1_41700 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_229.1_30457.t1 | 2 | 1 | AA_permease_2 | 4 | 110 | 3.6e-07 | 29.0 | 1.4e-10 | 3.6e-07 | 29.0 |
| pfu_aug2.0_229.1_30457.t1 | 2 | 2 | AA_permease_2 | 159 | 206 | 3.6e-07 | 29.0 | 0.62 | 1500.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_229.1_30457.t1 | gi|733906893|ref|XP_010716504.1| | PREDICTED: large neutral amino acids transporter small subunit 1-like [Meleagris gallopavo] | 3.0e-29 |
| pfu_aug2.0_229.1_30457.t1 | gi|555960752|ref|XP_005892478.1| | PREDICTED: large neutral amino acids transporter small subunit 1 [Bos mutus] | 8.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_229.1_30457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_229.1_30457.t1 gttgttcttcgttggtgcaaaaaataaccatttgccaaaaatcatctccatgatcaactatagatttctgactccagctc catcacttctcactattctgatcctgacgttagtgatgcagactttcgaggagatatttttcctgatagagatgatgggt tttggatttgccattgtcttagctggggtcttctctggtcagattttcttgagatacaaagaacctgaaatggagagacc aatcaaactgccgatattcctgcccatgttcctatttctagtcaccatattcctgttagcgttgacgtgcctacagaagc cccaggaaagcctcctagcattgattctaatcctggctggtataccattatatatagtaggtgtggcaatggattctaag ccaaaatcatgtgtcaattttgtaggtaaactgacaagctgcatccagaaagtattacttgtggttnttattttatcttg gcagctgccgatattcctgcccatgttcctatttctagtcaccatattcctgttagcgttgacgtgcctacagaagcccc aggaaagcctcctagcattgattctaatcctggctggtataccattatatatagtaggtgtggcaatggattctaagcca aaatcatgtgtcaattttgtaggtaaactgacaagctgcatccagaaagtattacttgtggttccccaggataaggatac agaatgggaataa |
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Protein
| Protein ID | pfu_aug2.0_229.1_30457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_229.1_30457.t1 LFFVGAKNNHLPKIISMINYRFLTPAPSLLTILILTLVMQTFEEIFFLIEMMGFGFAIVLAGVFSGQIFLRYKEPEMERP IKLPIFLPMFLFLVTIFLLALTCLQKPQESLLALILILAGIPLYIVGVAMDSKPKSCVNFVGKLTSCIQKVLLVVXILSW QLPIFLPMFLFLVTIFLLALTCLQKPQESLLALILILAGIPLYIVGVAMDSKPKSCVNFVGKLTSCIQKVLLVVPQDKDT EWE |
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