Gene
| Gene Model ID | pfu_aug2.0_229.1_30462 |
|---|---|
| Locus | scaffold229.1 : 49816 ... 73561 : + |
| To GenomeBrowser | scaffold229.1:49816..73561 |
| Genes list of scaffold | scaffold229.1 |
| Synonym | pfu_aug1.0_8935.1_53262 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_229.1_30462.t1 | 3 | 1 | DUF1088 | 228 | 269 | 0.0 | 248.0 | 0.39 | 2900.0 | -2.5 |
| pfu_aug2.0_229.1_30462.t1 | 3 | 2 | DUF1088 | 417 | 458 | 0.0 | 248.0 | 0.1 | 750.0 | -0.6 |
| pfu_aug2.0_229.1_30462.t1 | 3 | 3 | DUF1088 | 606 | 767 | 0.0 | 248.0 | 0.0 | 0.0 | 248.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_229.1_30462.t1 | gi|759056059|ref|XP_011337268.1| | PREDICTED: neurobeachin isoform X2 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_229.1_30462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_229.1_30462.t1 atgaacatgactgatatactagtgtttgctagctctactaactttgctgaactggagcaggagaaaaacatgcctacagg tggcatactgagacagtgtctgagactagtctgtacagcggcagtgaggaattgtttggagtgcagacataggtcaggtc ataggtcacaacctcccacccccaccccacctccaagctctggggttaatggtacagatcctattcaagctctgatcaag gcatctcacccgactgaaaagaacattgttgagaacttgaacgagcagctttcaccgatcaaagattatgacaagctcct acaagacatggacattaatcgtctgagagccgttgtgtatagagacgtagaggagaccaaacaagctcagttcctggccc tagccattgtctactttacctctgtgctgatggtgtctaaatatagagatatcctagagccccccagccctgctgcagcc acgcctactgccaatagaatgtctattaatgcaccctctgcctcaaccattttacaaaacctgcgaccccttttggaaaa ctctcaaaatgaagaaattttgagaactagcttgatggagggcaaaaactctataataaaaccggacagaaccaaatcca gcataagtatcgcccaatcagaagccaggacagatatgattgttgatggagttgaagatgatggaagcatattggctcag atggcttgtggttccatatcaaatgaagattcagaggaagatttggaagaagaagaagatgaagaagaggaagaggagtc attgagtggtgaaggaactagtgaggcagatacatcgagggagatagtagagggagaggaaggttcgactcaaccagagc agctcaacagtagtgtagaggaagcgcctatgccaaagatgaagattaaggcagatatacatatcactgataccacagat gaggaagagactgaatcagtggataggtcagacacacctgaaagtgaggttcttgagaaaggggcggagtcagaacccac agagcatgctcaacaggaagaggatgtcaaagatgaggagaagcaagaggcagctgaagatgagggaggagaaaaggaaa atggaacagctggtgaggagaatggaatggttgatgaagttaaagaaaatggtgaagagactggaactgaggattccaaa agtggagatactgaagaacaagctgaggccaaaaatgaagatcagaccaaagaggaagatactgcgccacctacagaaga acaaacgaatgaagaggaggcaactcctcaagtgaattctgaggctgctcagatagagactgtaaaccaaactacagaaa aggaaattgtaaatggagatgtccaggaagatgaacggagggagaatgtaaatgagaataaaccaatatcatctatctcc gtcacaaaccaaacgccaaagggaaaagagcataatactgatagaccaaaactagaaaagctagatattcatacaaagat tccagcagcgttagagaacctgccttcagcagtggaggcgggcggatctctgacagagaggcttgagagggctctggggt ccgtagctcctctcctgagggaaatatttgtcgactttgctccgtttttgtcaaagacactgataggttcacatggccag gagctgcttattggaggactggtaacactgaagcagagtacctctgtggtagagctagtgatgttgttatgttcccagga atggcagaattctctacagaaacatgctggattggcatttatagagcttgtcaatgaaggaagactgctagcacatgcta caagagatcatattgtaagagtggctaatgaagcagagttcatccttaacagaatgagggcagaagacgtacagaaacat gcagagtttgagtcactatgtgctcagacgatgctagacaggaaagaggaggagagaatgtgtgatcacttgattaaatc agcaaaacgaagggaccaagtggtggccgtcaaaatacgtgataagatacttaatatcctcggcaacaagcatggtgctt ggggagaactcagtgaaaagggagcggagtattggaagttggatgtttgggaggatgattcccgtaggagaaggaggctg atgagaaaccctatcggatccacccacccggaggctactctcaaggcagctctagaacatggagagaatgaggatgcaat taaccaggcccgggaggctttccatgcccatctggcagcgacgaagaaagcccaacaacaaacgcccgactatactgacg aggaacttatgatggaggagagagatctagaacaggagtttgctggacataaaacagaatttcactttttaagatactcc nttgctgttaacggtaccatggcaataaccaaaacagaaatgtactttgaaatggacgaggataatgaggaaaataaaca gattgatccaaaggtatggaaaccaataagggtttgtattgtatgttctatggaaaccagtgagggtttgtattgtatgt ccttaggcagtaggatcaggttgatttcctgtcaaagaagattcaaacctagatggatacttgagtag |
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Protein
| Protein ID | pfu_aug2.0_229.1_30462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_229.1_30462.t1 MNMTDILVFASSTNFAELEQEKNMPTGGILRQCLRLVCTAAVRNCLECRHRSGHRSQPPTPTPPPSSGVNGTDPIQALIK ASHPTEKNIVENLNEQLSPIKDYDKLLQDMDINRLRAVVYRDVEETKQAQFLALAIVYFTSVLMVSKYRDILEPPSPAAA TPTANRMSINAPSASTILQNLRPLLENSQNEEILRTSLMEGKNSIIKPDRTKSSISIAQSEARTDMIVDGVEDDGSILAQ MACGSISNEDSEEDLEEEEDEEEEEESLSGEGTSEADTSREIVEGEEGSTQPEQLNSSVEEAPMPKMKIKADIHITDTTD EEETESVDRSDTPESEVLEKGAESEPTEHAQQEEDVKDEEKQEAAEDEGGEKENGTAGEENGMVDEVKENGEETGTEDSK SGDTEEQAEAKNEDQTKEEDTAPPTEEQTNEEEATPQVNSEAAQIETVNQTTEKEIVNGDVQEDERRENVNENKPISSIS VTNQTPKGKEHNTDRPKLEKLDIHTKIPAALENLPSAVEAGGSLTERLERALGSVAPLLREIFVDFAPFLSKTLIGSHGQ ELLIGGLVTLKQSTSVVELVMLLCSQEWQNSLQKHAGLAFIELVNEGRLLAHATRDHIVRVANEAEFILNRMRAEDVQKH AEFESLCAQTMLDRKEEERMCDHLIKSAKRRDQVVAVKIRDKILNILGNKHGAWGELSEKGAEYWKLDVWEDDSRRRRRL MRNPIGSTHPEATLKAALEHGENEDAINQAREAFHAHLAATKKAQQQTPDYTDEELMMEERDLEQEFAGHKTEFHFLRYS XAVNGTMAITKTEMYFEMDEDNEENKQIDPKVWKPIRVCIVCSMETSEGLYCMSLGSRIRLISCQRRFKPRWILE |
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