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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_229.1_30473
Locus scaffold229.1 : 327712 ... 334495 : -
To GenomeBrowser scaffold229.1:327712..334495
Genes list of scaffold scaffold229.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_229.1_30473.t1 1 1 MAPEG 28 124 3.0e-13 49.4 2.5e-17 3.7e-13 49.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_229.1_30473.t1 gi|291228132|ref|XP_002734019.1| PREDICTED: microsomal glutathione S-transferase 2-like [Saccoglossus kowalevskii] 7.0e-39
pfu_aug2.0_229.1_30473.t1 gi|512815815|ref|XP_004911179.1| PREDICTED: microsomal glutathione S-transferase 2 [Xenopus (Silurana) tropicalis] 2.0e-33

Transcript
Transcript IDpfu_aug2.0_229.1_30473.t1
Definition-
>pfu_aug2.0_229.1_30473.t1
atgtcgctacaactgagagatgttgcttttttgtcaggaatctcaatggcccatacctatcagttaatacgatttgcaag
aaggaccggtgcaactagaatgaagtacaagatgaactatcccgctatgaccggcaacgagaacgtggaaagggccatca
gagcacaacaaaacgcattagaattctttcctctgttttccacgtcactttggctttctgggatatactttcatcaagtg
cctgttggacttgctgggttgctttatctatatggaagacagaaatattatgagggatatctcgaaagtgcggagggaag
attaccaggattcaaaattcaagcgagggccttacaagccatgatcctcatgttcggtttgggttttacaaacttcctgc
tagaagagtacgctggagtcagccttaaagatcaaatccttaaatatataccaatcaaaatgtag

Protein
Protein IDpfu_aug2.0_229.1_30473.t1
Definition-
>pfu_aug2.0_229.1_30473.t1
MSLQLRDVAFLSGISMAHTYQLIRFARRTGATRMKYKMNYPAMTGNENVERAIRAQQNALEFFPLFSTSLWLSGIYFHQV
PVGLAGLLYLYGRQKYYEGYLESAEGRLPGFKIQARALQAMILMFGLGFTNFLLEEYAGVSLKDQILKYIPIKM

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