Gene
| Gene Model ID | pfu_aug2.0_23.1_10106 |
|---|---|
| Locus | scaffold23.1 : 263786 ... 282955 : - |
| To GenomeBrowser | scaffold23.1:263786..282955 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_6995.1_17026 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10106.t1 | 4 | 1 | Dzip-like_N | 1 | 66 | 9.2e-17 | 60.9 | 4.3e-20 | 9.2e-17 | 60.9 |
| pfu_aug2.0_23.1_10106.t1 | 2 | 1 | TPR_MLP1_2 | 28 | 197 | 6.6e-08 | 32.3 | 5.9e-09 | 1.2e-05 | 25.0 |
| pfu_aug2.0_23.1_10106.t1 | 4 | 2 | Dzip-like_N | 180 | 221 | 9.2e-17 | 60.9 | 0.017 | 36.0 | 4.1 |
| pfu_aug2.0_23.1_10106.t1 | 2 | 2 | TPR_MLP1_2 | 202 | 258 | 6.6e-08 | 32.3 | 0.01 | 21.0 | 4.8 |
| pfu_aug2.0_23.1_10106.t1 | 4 | 3 | Dzip-like_N | 244 | 285 | 9.2e-17 | 60.9 | 0.2 | 430.0 | 0.7 |
| pfu_aug2.0_23.1_10106.t1 | 4 | 4 | Dzip-like_N | 416 | 453 | 9.2e-17 | 60.9 | 3.4 | 7300.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10106.t1 | gi|524887518|ref|XP_005100344.1| | PREDICTED: zinc finger protein DZIP1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_23.1_10106.t1 | gi|676490977|ref|XP_009065444.1| | hypothetical protein LOTGIDRAFT_236380 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_23.1_10106.t1 | gi|585703613|ref|XP_006823292.1| | PREDICTED: zinc finger protein Dzip1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_23.1_10106.t1 | gi|390338540|ref|XP_799867.3| | 0.0 | |
| pfu_aug2.0_23.1_10106.t1 | gi|459177477|ref|XP_002129615.2| | PREDICTED: zinc finger protein DZIP1L [Ciona intestinalis] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10106.t1 atggttgatcccaactttataaagcttttcaagcttgcacaacttacgatagaatatttactgcactcacaagaatatct cactactgtagtcactggtatggaggaaaaaatcaagaaagaagaacaggagcacaatgatacaaagaagctgctggaaa agacaaaacaggacctgtcagattgtaaaaaagaaagtcacaagaggaagaaattacttatggcacaacaacaattaatt catgcaggttctggaagctataataagtgtccattctgtccgaaagcttttttgaacagttccttcctacagtctcacat caatcgtcgacatacagattattctcagtatgcagctagtgcaggtcaggtacccggtgtgtcaccaggggctcagagct cggaggaagtcaaattagcagcagaaagtgtaacacaacaacagtctcacgcagctcctgttacacctagacagacatta cctcaaccaaagacagaaacagaacatgtcagggaggaagacaagaaagagatagaaaaagtaaaagaaatatttatgag agaacttaaggagttgaatgagaagtaccaagcttcagagagagccatgtccgagatggagcagagatacggcactaaac ggtcaaatttaggagagttacaggacgacacggataacgaaagggaacttctacgtcagcaaagagaggaagtggccgtg cttaaagaacagttacaaagccagatacataacgttgaggcaaagatgtctgagaaaatgacaaagcaagaaaggatgtg gcagaagaaaatggctcggctcaaacagaaagaagaagaaggaaaggtggtgcgagatagaagacaggaaatgacagaaa tggaggaagttgaagaaatgcttcggcaagagcaagcctcagctgctgcagcttcaccccacagtacaacccccagggga gttcagcccagtggaatagaggtccccactaaactcaagatggaaccctctgatgatgaagatgatgatacaggagccgg tacaggcagtttcggtaccaagtcaatgcacagtacaatggagtccttcaggagtggagaactaactctaaggactacac aatttttggaggaattacggaaaaatcccacattaaaactgatgcgagatgaactgatatctttacttcaagacagcttg gataagataggcataccgcctgagacccgaggaataccagataatatcttacacagcaagcttgccgtactgaagcagag aagacagactaccatacagaaatatccaatcttccccgagttcagaaaacaatgtaatgagcatgctgacagattagcaa gagagaaactgagagagcagaaacgttcaccaccacctacatctgctccaagatcaggcatgcctccaaggcctggcagt ggtagcaatcctaacgtatccagtgctggaggatccccatcaagacctgggccacctgctgcagccagacagatgtcagc tccgagcacacccactcgacaacctcatcagaccgcgtcaggatcgcctgcacggctaatacagagtcagcccataccta gtcagcaactaccgcccagggccgcacctcgtacacagagtcctcaacgtacaggacagtcagggtcaagtttagagttt acaagcactcagtgggacagtgatgaagaagaggagacagaggaagatgatgatgacagccagccagctttccagagagt tcccagggttcagtcccgccctcctcccgtcacggcaggtcatggcagaccttcccagcatccctcaccagctcccagac agactccccagtcacgaacagcagcggccctacaggatgacgacgatgacgattgggacgactcagacataagaaaagac gataagaagccaactggagcaatagatgttatgggatcaagtcctccaaagaaaaagatagaagtactggacgactttaa ttcggacagtgaatgggacgtgtcaccattcgaggaagatcaacctgcaaaaaatgctcccaagaaaggcccaacaccag tcagaggaagtcatgcctcggagacgacaaacacatacggctctagtgtatggggatcttcctctaaaggtgctagtaca gtccctgcccctgggggacagggtagtcaggggagagcatccaggggctcctttgtcagtgtaactgatgttagttcgga cgaagaacttgacttggacaatatttga |
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Protein
| Protein ID | pfu_aug2.0_23.1_10106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10106.t1 MVDPNFIKLFKLAQLTIEYLLHSQEYLTTVVTGMEEKIKKEEQEHNDTKKLLEKTKQDLSDCKKESHKRKKLLMAQQQLI HAGSGSYNKCPFCPKAFLNSSFLQSHINRRHTDYSQYAASAGQVPGVSPGAQSSEEVKLAAESVTQQQSHAAPVTPRQTL PQPKTETEHVREEDKKEIEKVKEIFMRELKELNEKYQASERAMSEMEQRYGTKRSNLGELQDDTDNERELLRQQREEVAV LKEQLQSQIHNVEAKMSEKMTKQERMWQKKMARLKQKEEEGKVVRDRRQEMTEMEEVEEMLRQEQASAAAASPHSTTPRG VQPSGIEVPTKLKMEPSDDEDDDTGAGTGSFGTKSMHSTMESFRSGELTLRTTQFLEELRKNPTLKLMRDELISLLQDSL DKIGIPPETRGIPDNILHSKLAVLKQRRQTTIQKYPIFPEFRKQCNEHADRLAREKLREQKRSPPPTSAPRSGMPPRPGS GSNPNVSSAGGSPSRPGPPAAARQMSAPSTPTRQPHQTASGSPARLIQSQPIPSQQLPPRAAPRTQSPQRTGQSGSSLEF TSTQWDSDEEEETEEDDDDSQPAFQRVPRVQSRPPPVTAGHGRPSQHPSPAPRQTPQSRTAAALQDDDDDDWDDSDIRKD DKKPTGAIDVMGSSPPKKKIEVLDDFNSDSEWDVSPFEEDQPAKNAPKKGPTPVRGSHASETTNTYGSSVWGSSSKGAST VPAPGGQGSQGRASRGSFVSVTDVSSDEELDLDNI |
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