Gene
| Gene Model ID | pfu_aug2.0_23.1_10129 |
|---|---|
| Locus | scaffold23.1 : 684807 ... 692946 : + |
| To GenomeBrowser | scaffold23.1:684807..692946 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_3939.1_52140 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10129.t1 | 2 | 1 | FAM178 | 5 | 100 | 2.0e-11 | 43.2 | 5.4e-15 | 2.0e-11 | 43.2 |
| pfu_aug2.0_23.1_10129.t1 | 2 | 2 | FAM178 | 192 | 209 | 2.0e-11 | 43.2 | 0.16 | 600.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10129.t1 | gi|585660685|ref|XP_006816431.1| | PREDICTED: uncharacterized protein LOC100370605 [Saccoglossus kowalevskii] | 2.0e-27 |
| pfu_aug2.0_23.1_10129.t1 | gi|390338885|ref|XP_003724869.1| | 2.0e-25 | |
| pfu_aug2.0_23.1_10129.t1 | gi|260828187|ref|XP_002609045.1| | hypothetical protein BRAFLDRAFT_124025 [Branchiostoma floridae] | 3.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10129.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10129.t1 atggacagggcaaagtacaagaaagaagagcttactgccttactagtgatgttatgtcgagcagcattagatgaacgtct ctctagtgaactacttaccctagaactccagtgttgtatttgggccattgtgcagaaatactcagaaactgactgggaat cacagcgtgttatgttatgtgccgtcctgtcagccgttaccagccaccatcacaatgctgtgtacatgtgtggactttta cctctcttaccaagagggatttatctacaacgcagagttggctttatgttcctactcaagatatttggaatagaaccaac tgacattgaagattttaagaagtccattgggttagagttgaagagcctacaccagtttataccattaatgaaagatctgg tggaggacgatatgtacaagctgtccagctgtctgaatctgctagataaatgtatagggaacgataccatcaaattatca gaaaaggatgatcttgtcaacatcatgaatcacattaagaagatgtctggtgaaattcgagaaaatctgaaggacttaat ggtcagactgaccagtaaatggacaatgttacttttatcttgtggcagtagtcagaaaaccctgtttgaatgcacaaatg gaacttcacagaaactaaaaatagagactgtacaagccagccaatcagataatgactctgagcaatctgaccaatcagaa ccagaattggaagatccccttgaaggattggaatctctacagcaatga |
|
Protein
| Protein ID | pfu_aug2.0_23.1_10129.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10129.t1 MDRAKYKKEELTALLVMLCRAALDERLSSELLTLELQCCIWAIVQKYSETDWESQRVMLCAVLSAVTSHHHNAVYMCGLL PLLPRGIYLQRRVGFMFLLKIFGIEPTDIEDFKKSIGLELKSLHQFIPLMKDLVEDDMYKLSSCLNLLDKCIGNDTIKLS EKDDLVNIMNHIKKMSGEIRENLKDLMVRLTSKWTMLLLSCGSSQKTLFECTNGTSQKLKIETVQASQSDNDSEQSDQSE PELEDPLEGLESLQQ |
|