Gene
| Gene Model ID | pfu_aug2.0_2302.1_08816 |
|---|---|
| Locus | scaffold2302.1 : 29887 ... 43135 : - |
| To GenomeBrowser | scaffold2302.1:29887..43135 |
| Genes list of scaffold | scaffold2302.1 |
| Synonym | pfu_aug1.0_3208.1_23230 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2302.1_08816.t1 | 5 | 1 | TPR_1 | 3 | 36 | 1.1e-14 | 53.3 | 9.7e-07 | 0.0012 | 18.3 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 1 | TPR_11 | 3 | 36 | 1.4e-10 | 40.6 | 0.00017 | 0.22 | 11.2 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 1 | TPR_2 | 4 | 36 | 9.8e-15 | 53.2 | 3.4e-06 | 0.0042 | 16.8 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 1 | TPR_12 | 4 | 32 | 1.8e-14 | 53.4 | 0.007 | 8.7 | 6.3 |
| pfu_aug2.0_2302.1_08816.t1 | 6 | 1 | TPR_8 | 4 | 35 | 5.9e-06 | 25.6 | 2.7e-05 | 0.033 | 13.9 |
| pfu_aug2.0_2302.1_08816.t1 | 3 | 1 | TPR_7 | 5 | 34 | 2.3e-06 | 26.9 | 0.12 | 150.0 | 2.5 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 2 | TPR_11 | 351 | 407 | 1.4e-10 | 40.6 | 0.018 | 23.0 | 4.7 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 2 | TPR_12 | 383 | 447 | 1.8e-14 | 53.4 | 4.7e-08 | 5.8e-05 | 22.9 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 2 | TPR_2 | 384 | 408 | 9.8e-15 | 53.2 | 0.0027 | 3.3 | 7.8 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 2 | TPR_1 | 384 | 406 | 1.1e-14 | 53.3 | 0.0073 | 9.0 | 6.0 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 3 | TPR_11 | 384 | 448 | 1.4e-10 | 40.6 | 1.3e-05 | 0.016 | 14.8 |
| pfu_aug2.0_2302.1_08816.t1 | 6 | 2 | TPR_8 | 385 | 405 | 5.9e-06 | 25.6 | 0.72 | 890.0 | 0.0 |
| pfu_aug2.0_2302.1_08816.t1 | 3 | 2 | TPR_7 | 387 | 411 | 2.3e-06 | 26.9 | 0.0047 | 5.8 | 6.9 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 3 | TPR_2 | 425 | 447 | 9.8e-15 | 53.2 | 7.9e-05 | 0.097 | 12.6 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 3 | TPR_1 | 425 | 447 | 1.1e-14 | 53.3 | 1.9e-06 | 0.0023 | 17.4 |
| pfu_aug2.0_2302.1_08816.t1 | 6 | 3 | TPR_8 | 425 | 447 | 5.9e-06 | 25.6 | 0.00021 | 0.25 | 11.1 |
| pfu_aug2.0_2302.1_08816.t1 | 3 | 3 | TPR_7 | 426 | 449 | 2.3e-06 | 26.9 | 7.8e-05 | 0.096 | 12.5 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 3 | TPR_12 | 463 | 512 | 1.8e-14 | 53.4 | 3.3e-05 | 0.041 | 13.8 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 4 | TPR_2 | 464 | 489 | 9.8e-15 | 53.2 | 0.015 | 19.0 | 5.5 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 4 | TPR_11 | 464 | 529 | 1.4e-10 | 40.6 | 0.00024 | 0.3 | 10.7 |
| pfu_aug2.0_2302.1_08816.t1 | 6 | 4 | TPR_8 | 465 | 483 | 5.9e-06 | 25.6 | 0.33 | 410.0 | 1.1 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 4 | TPR_1 | 466 | 482 | 1.1e-14 | 53.3 | 0.018 | 23.0 | 4.8 |
| pfu_aug2.0_2302.1_08816.t1 | 4 | 4 | TPR_12 | 502 | 542 | 1.8e-14 | 53.4 | 6.8e-05 | 0.084 | 12.8 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 5 | TPR_2 | 508 | 531 | 9.8e-15 | 53.2 | 0.018 | 22.0 | 5.2 |
| pfu_aug2.0_2302.1_08816.t1 | 5 | 5 | TPR_1 | 508 | 530 | 1.1e-14 | 53.3 | 0.072 | 89.0 | 2.9 |
| pfu_aug2.0_2302.1_08816.t1 | 6 | 5 | TPR_8 | 508 | 530 | 5.9e-06 | 25.6 | 1.6 | 1900.0 | -1.0 |
| pfu_aug2.0_2302.1_08816.t1 | 6 | 6 | TPR_8 | 537 | 547 | 5.9e-06 | 25.6 | 3.1 | 3900.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2302.1_08816.t1 | gi|390364499|ref|XP_003730621.1| | PREDICTED: tetratricopeptide repeat protein 25 isoform X3 [Strongylocentrotus purpuratus] | 4.99983e-42 |
| pfu_aug2.0_2302.1_08816.t1 | gi|390364497|ref|XP_003730620.1| | 6.00036e-42 | |
| pfu_aug2.0_2302.1_08816.t1 | gi|390364495|ref|XP_786290.3| | 8.00001e-42 | |
| pfu_aug2.0_2302.1_08816.t1 | gi|719766398|ref|XP_010217697.1| | PREDICTED: tetratricopeptide repeat protein 25 [Tinamus guttatus] | 3.0e-39 |
| pfu_aug2.0_2302.1_08816.t1 | gi|676438291|ref|XP_009048481.1| | hypothetical protein LOTGIDRAFT_140423 [Lottia gigantea] | 1.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_2302.1_08816.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2302.1_08816.t1 atgcttgcacctgctttacgtcagaaagctgatttgttgttcaaaaccgagaattacgagatggcctcggtatactataa ccgaggattaaaacattacccgaggaacaaagacttccaggacggcgtaataaaggccgagaaagaaatgaaccgaggtc gactcagccgcagtctcagccggactaaagtgagacgaatgaaaatgactgaggctggtgacctaacttaccttgtacat aaagtgccaaagtccaaaggattttcatacgagaagccaaaatcgcggacatcgtatcaaccgccaagtgccacgttcag tacacgccctctatgtcagctgattcgcattcacaaaacaccgacagtggcgctacctggcggtccgaacattccaaagt tatcgtccttggaaacctttgatttcgaggaaaaacgacctgatacaggattgataaaggaaaccattgcccaaatggtc gatgacaaaaagctgttacaattgctaatggataaaaataaatttccaggtgtttgcggtagtaatggtacacccgtgga tgatctggcagaggacggtctgtcatttatattagaacgagcctcatattgggatagactcggccccctccctcctcccc caccccctcggaaatcccgaaacagccgactgagcggaagctctatgtctttagattcgcacggaagttaccgaagcata gactcaaaaacttggaaatcgaacgattcagtgaatacagacagatcaagtaaaaagataaaatcaaaatatgcatacgg aaaaaagaaaaaggataaacccaaaatcgacccagcggtgctcaacttcaagtttaggtctttgggaatgatcggagaaa tggaccaacgaatgatgacggaaattgaagaggaagatgaagtttctattgagcatgtgccaaatgaagaggaagttgta cgaatagaaaaggaaccggaagacaccgcgggacagtcgattacggaatacgtgaaaaaggagttggatgaaatatacga ggatttctccaagggaaaatacggcgaagtcagcagcaaatgcaatgcatgtctccgactactgtcacactacagggacg aacaagtgcccgaaaaattcgaaatgattgctaatttacatagttaccttggcaacaccgcaatgcaaactgggaaattc gatatcagtataaaacatcacgaagcagacctaatgattggaaatcagctagagatggacataatcaggtcacgagcatt aggaaatttaggtcgaatttatatgataaaaggaaaacacaaggaagctctagaaatgtttactgctaaagcgccaatgt gcaaaaatccaaaagaatcaacgatactgtttcatgaaatcggcaactgtttccttctgcttaaaaacttctcgtctgct cgagaggctggcgggaaaactctcaagatggcgatggagaccggagatgtccgaatgcagttgcaggcctccatacttaa tggattagcagaagtaaatatgaagaaataccaatcagcgcacgactccttcgaaattgcattagaccatgctaaatcac tgggcgacgagaaagcggaagctgccatgaagcatgcgttaattgacgtcaacaagagaatggccaataaaatcaaaagg acaaaacttaaaaaggaagtgacgtatccttcatcaaatcccaccagctcggcaaggactgtgttagtggagggatga |
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Protein
| Protein ID | pfu_aug2.0_2302.1_08816.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2302.1_08816.t1 MLAPALRQKADLLFKTENYEMASVYYNRGLKHYPRNKDFQDGVIKAEKEMNRGRLSRSLSRTKVRRMKMTEAGDLTYLVH KVPKSKGFSYEKPKSRTSYQPPSATFSTRPLCQLIRIHKTPTVALPGGPNIPKLSSLETFDFEEKRPDTGLIKETIAQMV DDKKLLQLLMDKNKFPGVCGSNGTPVDDLAEDGLSFILERASYWDRLGPLPPPPPPRKSRNSRLSGSSMSLDSHGSYRSI DSKTWKSNDSVNTDRSSKKIKSKYAYGKKKKDKPKIDPAVLNFKFRSLGMIGEMDQRMMTEIEEEDEVSIEHVPNEEEVV RIEKEPEDTAGQSITEYVKKELDEIYEDFSKGKYGEVSSKCNACLRLLSHYRDEQVPEKFEMIANLHSYLGNTAMQTGKF DISIKHHEADLMIGNQLEMDIIRSRALGNLGRIYMIKGKHKEALEMFTAKAPMCKNPKESTILFHEIGNCFLLLKNFSSA REAGGKTLKMAMETGDVRMQLQASILNGLAEVNMKKYQSAHDSFEIALDHAKSLGDEKAEAAMKHALIDVNKRMANKIKR TKLKKEVTYPSSNPTSSARTVLVEG |
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