Gene
| Gene Model ID | pfu_aug2.0_2302.1_08817 |
|---|---|
| Locus | scaffold2302.1 : 58016 ... 70825 : + |
| To GenomeBrowser | scaffold2302.1:58016..70825 |
| Genes list of scaffold | scaffold2302.1 |
| Synonym | pfu_aug1.0_3208.1_23232 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2302.1_08817.t1 | 4 | 1 | TPR_11 | 15 | 78 | 1.2e-22 | 79.2 | 8.6e-19 | 8.5e-16 | 57.3 |
| pfu_aug2.0_2302.1_08817.t1 | 5 | 1 | TPR_2 | 15 | 47 | 4.2e-17 | 60.6 | 7.6e-08 | 7.5e-05 | 22.3 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 1 | TPR_1 | 16 | 46 | 1.0e-17 | 62.8 | 8.2e-08 | 8.2e-05 | 22.0 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 1 | TPR_8 | 16 | 47 | 3.7e-11 | 41.9 | 3.9e-05 | 0.038 | 13.7 |
| pfu_aug2.0_2302.1_08817.t1 | 3 | 1 | TPR_12 | 16 | 75 | 6.4e-11 | 42.0 | 4.3e-06 | 0.0042 | 16.9 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 1 | TPR_14 | 16 | 47 | 7.2e-06 | 26.1 | 0.01 | 10.0 | 7.0 |
| pfu_aug2.0_2302.1_08817.t1 | 3 | 1 | TPR_16 | 19 | 75 | 1.4e-11 | 44.7 | 1.0e-09 | 1.0e-06 | 29.2 |
| pfu_aug2.0_2302.1_08817.t1 | 3 | 2 | TPR_12 | 49 | 113 | 6.4e-11 | 42.0 | 1.8e-06 | 0.0018 | 18.1 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 2 | TPR_8 | 51 | 76 | 3.7e-11 | 41.9 | 0.00012 | 0.12 | 12.2 |
| pfu_aug2.0_2302.1_08817.t1 | 5 | 2 | TPR_2 | 52 | 80 | 4.2e-17 | 60.6 | 0.0011 | 1.1 | 9.3 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 2 | TPR_14 | 54 | 78 | 7.2e-06 | 26.1 | 0.59 | 590.0 | 1.6 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 2 | TPR_1 | 57 | 81 | 1.0e-17 | 62.8 | 0.0012 | 1.2 | 8.8 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 2 | TPR_11 | 75 | 113 | 1.2e-22 | 79.2 | 0.00019 | 0.19 | 11.3 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 3 | TPR_11 | 86 | 114 | 1.2e-22 | 79.2 | 0.00058 | 0.58 | 9.8 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 3 | TPR_1 | 86 | 114 | 1.0e-17 | 62.8 | 1.5e-07 | 0.00014 | 21.2 |
| pfu_aug2.0_2302.1_08817.t1 | 5 | 3 | TPR_2 | 86 | 114 | 4.2e-17 | 60.6 | 1.7e-06 | 0.0017 | 18.1 |
| pfu_aug2.0_2302.1_08817.t1 | 3 | 2 | TPR_16 | 86 | 121 | 1.4e-11 | 44.7 | 0.0018 | 1.8 | 9.3 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 3 | TPR_8 | 86 | 105 | 3.7e-11 | 41.9 | 0.01 | 10.0 | 6.1 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 3 | TPR_14 | 86 | 120 | 7.2e-06 | 26.1 | 0.0027 | 2.7 | 8.8 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 4 | TPR_11 | 286 | 341 | 1.2e-22 | 79.2 | 0.00038 | 0.38 | 10.4 |
| pfu_aug2.0_2302.1_08817.t1 | 5 | 4 | TPR_2 | 287 | 300 | 4.2e-17 | 60.6 | 3.3 | 3200.0 | -1.5 |
| pfu_aug2.0_2302.1_08817.t1 | 3 | 3 | TPR_12 | 318 | 360 | 6.4e-11 | 42.0 | 1.9e-05 | 0.019 | 14.8 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 4 | TPR_1 | 319 | 341 | 1.0e-17 | 62.8 | 3.3e-05 | 0.033 | 13.8 |
| pfu_aug2.0_2302.1_08817.t1 | 5 | 5 | TPR_2 | 319 | 340 | 4.2e-17 | 60.6 | 0.00012 | 0.12 | 12.3 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 4 | TPR_8 | 320 | 340 | 3.7e-11 | 41.9 | 0.0011 | 1.1 | 9.1 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 4 | TPR_14 | 320 | 339 | 7.2e-06 | 26.1 | 0.33 | 330.0 | 2.3 |
| pfu_aug2.0_2302.1_08817.t1 | 3 | 3 | TPR_16 | 326 | 340 | 1.4e-11 | 44.7 | 0.86 | 850.0 | 0.8 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 1 | Annexin | 431 | 492 | 0.0 | 243.8 | 1.4e-20 | 1.4e-17 | 63.3 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 2 | Annexin | 502 | 567 | 0.0 | 243.8 | 4.4e-23 | 4.3e-20 | 71.3 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 3 | Annexin | 585 | 644 | 0.0 | 243.8 | 6.6e-20 | 6.6e-17 | 61.1 |
| pfu_aug2.0_2302.1_08817.t1 | 4 | 4 | Annexin | 662 | 723 | 0.0 | 243.8 | 2.5e-18 | 2.5e-15 | 56.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2302.1_08817.t1 | gi|573901164|ref|XP_006638309.1| | PREDICTED: tetratricopeptide repeat protein 25-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_2302.1_08817.t1 | gi|742113807|ref|XP_010873104.1| | PREDICTED: tetratricopeptide repeat protein 25 isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_2302.1_08817.t1 | gi|198421272|ref|XP_002129888.1| | PREDICTED: tetratricopeptide repeat protein 25 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_2302.1_08817.t1 | gi|291239506|ref|XP_002739664.1| | PREDICTED: tetratricopeptide repeat protein 25-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2302.1_08817.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2302.1_08817.t1 atgtacgacggcgatgaatccgagggtcctaaagggacgttcgaaatttacaaggcagaggctgacacgctttttaagca aggagaatacagaaaatccatcgaaagctacacaacggcattagaacttcagccaggagataagaactgtcttgtatcca gatctaagtgttacctccagcttggtgatacagataatgcacttactgatgctgaatcttcacttcaagaagacaaaaac ttccacaagggagtttatcagaaagcgcaggcattgtattaccaaggtgactttgagctggcccttgtgtattatcaccg tggacacaagcttcgtccagaactacaggagttcagactaggtatacagaaagcccaggaagccatcgataattctgtag gatctccagacaaagtacaactgaccacagagggagatttgtcattttttgataaacaagatgataaaaagcccaagaag agacaaggctatggttcgtatggtagaggtgttggacctacacagtctaaagctctggatgccaggagaacagatgggaa tgagaaaacgattaagcaattacttggagagttatacggggacaggcagtacttggagaaactactcaaagaaactgatc aacagacagacatgggcaagtccatatctagtcttgtcagtcagggtctgtcttacttggacacacgtacagacttctgg agacaacagaagcccatgtacgcacgtaaacacgatagagcgcaacagagacgtaaaacggagatggtagggggcaaatt atcagcaaatgactatatcattaaagaactggaacgaatagatcaagcacaaatcgagggtaaataccaggagagtttga agcgtgcccagcgatgcttaggaaccgtacagacgttctctgaggaagcggtaccaaacaaaatggaggtcattgccaac ctttacagttgtatcggtaatgctcacttggaactcggaaattacgacaagtcgttggaaaatcatcagatagactatga tatgggtgaacaataaggtgatacttctgctgaatctgccattaagaaagctattgacgatgttaatacaaaaatagcca aaggaggcggatccagtgcatctatcaataaagactcaccgtctacgaaagataaagaggaggcaactgctgacgaatca aataacgcagaatcatcagatataacggaagaagatgaagagaagggagatggaacagtcaaaccttaccctaattttaa tgcaaaaagtgacgctgaagtaatcaaaaatgcaatgtcaggtttaggaactgaagaggaggacataacaaatgttttag cgtttagaactttatcacaacgtcaagatatagcggcagcattcaaatcggaatatggcaaggatatgttagatgagata gaaggggaaacgagtggagattatgtagaaactataaaaggtttactgatgtcaccgttagagtttgacgctcaccaact cagatctgctatgaagggtgctggtactgatgaagatatcctgtttgaaatcatttgtacaagatcaaatgctgaattaa aagaaataaagaaaatatataagcaaaaatataagggagagcttgtcgaccatattgagagtgaaacttccaaagacact aagcatctcctaatttcattggctaattgtaaccgtagcgacagccgagaggtcgacaacaatttggcaaagaaggatgc caaggctcttcatgatgcagcacacaaatcacgcggaactgacgaagctacaataacgacacttcttgtatcaaggagtt ttccacaacttcgggcaacgtttaacgaatacaaaagattatcagggaaggatatagagagcatgttggaatatgaactg tctggtgatttattaacgggaactaaaactgtcgtcaattgtgtgagaaataaaagaaatcattttgcacaacaactaca gaaagtcaccaaaggaattggaacagatgataatacattaatacgtattatagtgagtcgatgtgagaaagatttagtac aagttaaagatgaatacgaaaagatcagcagaaaaactctgaaaagtactattgaaagaaagactagaagattcactgat gtcctaatatcttaccaaagattcaaacttttctggagggaaacagatgctcaatgtgctatagtaacttactga |
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Protein
| Protein ID | pfu_aug2.0_2302.1_08817.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2302.1_08817.t1 MYDGDESEGPKGTFEIYKAEADTLFKQGEYRKSIESYTTALELQPGDKNCLVSRSKCYLQLGDTDNALTDAESSLQEDKN FHKGVYQKAQALYYQGDFELALVYYHRGHKLRPELQEFRLGIQKAQEAIDNSVGSPDKVQLTTEGDLSFFDKQDDKKPKK RQGYGSYGRGVGPTQSKALDARRTDGNEKTIKQLLGELYGDRQYLEKLLKETDQQTDMGKSISSLVSQGLSYLDTRTDFW RQQKPMYARKHDRAQQRRKTEMVGGKLSANDYIIKELERIDQAQIEGKYQESLKRAQRCLGTVQTFSEEAVPNKMEVIAN LYSCIGNAHLELGNYDKSLENHQIDYDMGEQXGDTSAESAIKKAIDDVNTKIAKGGGSSASINKDSPSTKDKEEATADES NNAESSDITEEDEEKGDGTVKPYPNFNAKSDAEVIKNAMSGLGTEEEDITNVLAFRTLSQRQDIAAAFKSEYGKDMLDEI EGETSGDYVETIKGLLMSPLEFDAHQLRSAMKGAGTDEDILFEIICTRSNAELKEIKKIYKQKYKGELVDHIESETSKDT KHLLISLANCNRSDSREVDNNLAKKDAKALHDAAHKSRGTDEATITTLLVSRSFPQLRATFNEYKRLSGKDIESMLEYEL SGDLLTGTKTVVNCVRNKRNHFAQQLQKVTKGIGTDDNTLIRIIVSRCEKDLVQVKDEYEKISRKTLKSTIERKTRRFTD VLISYQRFKLFWRETDAQCAIVTY |
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