Gene
| Gene Model ID | pfu_aug2.0_231.1_03836 |
|---|---|
| Locus | scaffold231.1 : 56246 ... 70896 : + |
| To GenomeBrowser | scaffold231.1:56246..70896 |
| Genes list of scaffold | scaffold231.1 |
| Synonym | pfu_aug1.0_26059.1_55120 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_231.1_03836.t1 | 6 | 1 | NHL | 777 | 791 | 2.9e-09 | 36.4 | 0.73 | 5400.0 | -2.4 |
| pfu_aug2.0_231.1_03836.t1 | 6 | 2 | NHL | 818 | 835 | 2.9e-09 | 36.4 | 0.035 | 260.0 | 1.8 |
| pfu_aug2.0_231.1_03836.t1 | 6 | 3 | NHL | 871 | 888 | 2.9e-09 | 36.4 | 0.98 | 7300.0 | -2.8 |
| pfu_aug2.0_231.1_03836.t1 | 6 | 4 | NHL | 888 | 893 | 2.9e-09 | 36.4 | 1.7 | 13000.0 | -3.5 |
| pfu_aug2.0_231.1_03836.t1 | 6 | 5 | NHL | 911 | 938 | 2.9e-09 | 36.4 | 7.1e-10 | 5.2e-06 | 26.1 |
| pfu_aug2.0_231.1_03836.t1 | 6 | 6 | NHL | 956 | 981 | 2.9e-09 | 36.4 | 0.0048 | 36.0 | 4.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_231.1_03836.t1 | gi|524876088|ref|XP_005094764.1| | PREDICTED: uncharacterized protein LOC101846341 isoform X2 [Aplysia californica] | 2.8026e-45 |
| pfu_aug2.0_231.1_03836.t1 | gi|524876086|ref|XP_005094763.1| | PREDICTED: uncharacterized protein LOC101846341 isoform X1 [Aplysia californica] | 2.8026e-45 |
| pfu_aug2.0_231.1_03836.t1 | gi|499019718|ref|XP_004560645.1| | PREDICTED: tripartite motif-containing protein 3-like isoform X2 [Maylandia zebra] | 7.0e-27 |
| pfu_aug2.0_231.1_03836.t1 | gi|542233697|ref|XP_003450186.2| | PREDICTED: tripartite motif-containing protein 3-like isoform X1 [Oreochromis niloticus] | 9.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_231.1_03836.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03836.t1 atggagcagtttagtgaagatctaaagagttcattggagacaagccaacatttgatacagaagttggcaggagtattaag acggttccaggctgtcaacaccctcctactgctcagacgcaacactgccttacacgagcttgaccgctacattcacacgc tgaaagcttgggtagacaactttgacgacaggaccaagacgaatattattgaagcgtacgcagagaaggctggcgtggta acagaggttatggaggaggtacagagagagattgacacactaaagatgttgtcaaacgagtccacaccattcctaactca ctcctccaatcatacagacgagcaggtggaacgctgtaaaacacttatagagggtttcagtgttatgttccaaagtagct gtgttgacttggaattagataaaagtctgccgtgcctgaaactgatcaagcacaaaacagacgaccttccatccctcggg aagatccaaacaagctttgaggatgttgatactgctgaatcaatgacggcaagtaaacacaagtttcaatctctgattga caatgacatagaggacagccgaacagttgaatcatcaaagataccatcaacagttataaacgtcaagtctagccccagaa agagtcccttagcgatcagaaattacgcatctccttcaagatatctacaacaacagctaggtaaagcaggtcttcttggg tcggagttctcagagaaaagatcatcaatgaattcacgtgataaggtcaaatacagttcaacagaatcgctaaaatcctg cggaagtggaaaagggacgccaagtagaagactatcaccacagaaagaccacagaagcgtttcaccagtgaagggtaaaa atttacagaacaaagaatctttgccaagaccaagggagcattccagggatcacagagggactcaatttgccggtaaaaag tacagttggaatgaggattcaaattccaacatcctcagttctgaagagatttcaaattccaagcaagaatcaaaatctgc attcagctctgaggcttccaaactagacagacagccaggtgaaacctgggacagtggtgatgaaaaggttgatgataaac agccagctcaggataaagaggttgatggaaacgccaataatattgatgataaagttaatgagacacttaccagccagctt gatggtaagaattatgaccttccatctgcaagcatgggagataacactgcagaagtcaacccagggaatattgacttacg cctcccagaagtcaacccagcaaatattgacttacgcctctcagaagtcaacccagcaaatatcgacttgcgcctcccag aggtcaacccagcgaatattgacttgccatccagtgagtcgtcggaagaccttaaatccacagaatcgcaaggcagtgct gataatgatactggaaaggccagtatagatgtaacaagtaatcgtgatgagaattttaatacaccggcttatgtcgggtg tactaatgctaacgatcctattaatgaactatttcctgaaaatggcccaacaccacagccaccaaaaatactaagtctgt tgacagccataaataggtcaaggtcaagcagtttcgggtcgaagagcagccttgatcaagactcgcctgttgaaaatatg aatggacaaaagagtgtttctagctgtctccctccacttcgaaggccaaaaatagctattacgacgtcaccaaaacctcc accacagcgaaagatggatgaggtaaaatccaaaagtattagcaatcaggaggtaggaagtggtgctattttgaacccaa tctcacatgtggtgacatgtttaaaagctgaacttgaacaattagttgacatttccctcggaacagaaccatgtcagaaa tcagttacattttccaataaagatggtgaccaaaataataatgttgagaaaccaataatcagtggtaaaggtacacatga aaaacctcctttgaccaatagtaagacaatggattgtaataataaccagaacatgctggttgggcctacactggaatggt tacatacaagtatagaaaagaaaacattgccaggaaaacaagaggctaagaagttgtctgaagaaaaggttgatttggca gcagagacttttgaaacaaaattccagactcccgttaaagaagttgggaactccgcaactgaagtatctcagaatggcaa cacacaggcaagatgcctgaagagaaaagccctgtgcatcagtctgacagtgttaacaaaataccagaacacaatatgtg aacttgtaagaccttcagctgtccttgtgaacaagcgagatgagatatttgtaaaggacgatctcgctgttcatattttc aatgaggactgtcgtttcctgagaagtatagggaagggtattctaaccaaaccttttggtttggcaataactccaaacga cttgatcataactgtagatgtaaattggaaaagtcctcaggtgttcatactgtcccaggatggtagagatttacgaagct tcccgtttacaacactgctgaattactaccctcagagtaaatgccgctttctggctgtacacaaagacattctggtcatc agtgatctaggagcgagttgtgtgtatatagcagacagtatgggacagactatcaacacatttgggagttatggatcagg tccaggacagttcagggaaccatcgggtgtagctatagatgctcatggtcatatcgtcataggggacagcaaaaatgaca gactacagattttctcttcgatggggcattatatctgtggagtgaagttcagtgatcctatcattcgaccctcagacatt cacctgaccgctgacggtcacctactggtcacaaacttcctacagcatcagataaaagtctacaagctcggagaggagtg a |
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Protein
| Protein ID | pfu_aug2.0_231.1_03836.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03836.t1 MEQFSEDLKSSLETSQHLIQKLAGVLRRFQAVNTLLLLRRNTALHELDRYIHTLKAWVDNFDDRTKTNIIEAYAEKAGVV TEVMEEVQREIDTLKMLSNESTPFLTHSSNHTDEQVERCKTLIEGFSVMFQSSCVDLELDKSLPCLKLIKHKTDDLPSLG KIQTSFEDVDTAESMTASKHKFQSLIDNDIEDSRTVESSKIPSTVINVKSSPRKSPLAIRNYASPSRYLQQQLGKAGLLG SEFSEKRSSMNSRDKVKYSSTESLKSCGSGKGTPSRRLSPQKDHRSVSPVKGKNLQNKESLPRPREHSRDHRGTQFAGKK YSWNEDSNSNILSSEEISNSKQESKSAFSSEASKLDRQPGETWDSGDEKVDDKQPAQDKEVDGNANNIDDKVNETLTSQL DGKNYDLPSASMGDNTAEVNPGNIDLRLPEVNPANIDLRLSEVNPANIDLRLPEVNPANIDLPSSESSEDLKSTESQGSA DNDTGKASIDVTSNRDENFNTPAYVGCTNANDPINELFPENGPTPQPPKILSLLTAINRSRSSSFGSKSSLDQDSPVENM NGQKSVSSCLPPLRRPKIAITTSPKPPPQRKMDEVKSKSISNQEVGSGAILNPISHVVTCLKAELEQLVDISLGTEPCQK SVTFSNKDGDQNNNVEKPIISGKGTHEKPPLTNSKTMDCNNNQNMLVGPTLEWLHTSIEKKTLPGKQEAKKLSEEKVDLA AETFETKFQTPVKEVGNSATEVSQNGNTQARCLKRKALCISLTVLTKYQNTICELVRPSAVLVNKRDEIFVKDDLAVHIF NEDCRFLRSIGKGILTKPFGLAITPNDLIITVDVNWKSPQVFILSQDGRDLRSFPFTTLLNYYPQSKCRFLAVHKDILVI SDLGASCVYIADSMGQTINTFGSYGSGPGQFREPSGVAIDAHGHIVIGDSKNDRLQIFSSMGHYICGVKFSDPIIRPSDI HLTADGHLLVTNFLQHQIKVYKLGEE |
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