Gene
| Gene Model ID | pfu_aug2.0_231.1_03839 |
|---|---|
| Locus | scaffold231.1 : 108286 ... 123140 : + |
| To GenomeBrowser | scaffold231.1:108286..123140 |
| Genes list of scaffold | scaffold231.1 |
| Synonym | pfu_aug1.0_15312.1_61481 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| udp-glucuronic acid decarboxylase 1 isoform x2 | GO:0003824 GO:0008152 GO:0050662 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_231.1_03839.t1 | 1 | 1 | Epimerase | 4 | 213 | 2.6e-29 | 102.3 | 2.1e-33 | 3.2e-29 | 102.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_231.1_03839.t1 | gi|676425781|ref|XP_009044413.1| | hypothetical protein LOTGIDRAFT_156144 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_231.1_03839.t1 | gi|675856502|ref|XP_009013811.1| | hypothetical protein HELRODRAFT_75405, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_231.1_03839.t1 | gi|667329151|ref|XP_008590800.1| | PREDICTED: UDP-glucuronic acid decarboxylase 1 [Galeopterus variegatus] | 0.0 |
| pfu_aug2.0_231.1_03839.t1 | gi|156380889|ref|XP_001631999.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_231.1_03839.t1 | gi|478523473|ref|XP_004435939.1| | PREDICTED: UDP-glucuronic acid decarboxylase 1 isoform 2 [Ceratotherium simum simum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_231.1_03839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03839.t1 atgatggaaggacatgaggtcacggtagtggacaattttttcacaggacgtaaacgcaatgtggaacactggcttggaca tgaaaactttgagcttattaaccatgatatcgtcaatccattattcatagaagttgatcagatatatcatttagcatcgc cagcatcaccaccaaactacatgtacaaccctgtcaaaaccanttacattattattccatgctttgatggtttggccaag agagttcgaggacgtcttctgttggcctcaacatcagaggtttatggggatccagaaatacacccccagcctgagactta ctggggacacgttaaccctataggacctagggcgtgttatgacgaaggcaagagggtcgccgaaaccatgtgctatgcct atgctaaacaggatgctgtgcaagtaagagtggccagaattttcaacacttttgggcctcgcatgcacatgaacgatgga cgagtggtcagcaactttatactacaagctttgcaggacgagccaatcacagtatacggtgaaggtacccagactcggtc atttcagtacgtatctgacctggtcgagggtttgatcaaactgatgaattctaattatagccagcctgttaacctcggta acccagacgagcacaccattctggatttcgctaaaattatcaatggattggttggtggaaaaagtaagatagtacacaag cctgctatgacagatgatcccaggaaaagaaagccggatatcaaagtagctaaatcacagctccagtggcaaccaaaggt tagcatgatgtcgggaataaataagacaattgagtattttcgaggtgaattacacaggtcacggcatagtgagaggaact tccattttctggacccctag |
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Protein
| Protein ID | pfu_aug2.0_231.1_03839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03839.t1 MMEGHEVTVVDNFFTGRKRNVEHWLGHENFELINHDIVNPLFIEVDQIYHLASPASPPNYMYNPVKTXYIIIPCFDGLAK RVRGRLLLASTSEVYGDPEIHPQPETYWGHVNPIGPRACYDEGKRVAETMCYAYAKQDAVQVRVARIFNTFGPRMHMNDG RVVSNFILQALQDEPITVYGEGTQTRSFQYVSDLVEGLIKLMNSNYSQPVNLGNPDEHTILDFAKIINGLVGGKSKIVHK PAMTDDPRKRKPDIKVAKSQLQWQPKVSMMSGINKTIEYFRGELHRSRHSERNFHFLDP |
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