Gene
| Gene Model ID | pfu_aug2.0_231.1_03840 |
|---|---|
| Locus | scaffold231.1 : 123143 ... 164005 : - |
| To GenomeBrowser | scaffold231.1:123143..164005 |
| Genes list of scaffold | scaffold231.1 |
| Synonym | pfu_aug1.0_15312.1_61482 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| reductase-related protein | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_231.1_03840.t1 | 3 | 1 | Epimerase | 10 | 88 | 3.2e-16 | 59.4 | 1.1e-12 | 1.8e-09 | 37.3 |
| pfu_aug2.0_231.1_03840.t1 | 1 | 1 | NAD_binding_10 | 10 | 243 | 6.9e-14 | 52.2 | 3.8e-16 | 6.3e-13 | 49.1 |
| pfu_aug2.0_231.1_03840.t1 | 2 | 1 | NmrA | 10 | 89 | 9.9e-09 | 34.7 | 2.7e-11 | 4.5e-08 | 32.6 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 1 | adh_short | 10 | 82 | 6.5e-07 | 29.4 | 1.3e-07 | 0.00022 | 21.1 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 1 | KR | 10 | 82 | 6.6e-06 | 25.9 | 5.7e-06 | 0.0093 | 15.6 |
| pfu_aug2.0_231.1_03840.t1 | 2 | 1 | 3Beta_HSD | 11 | 89 | 1.8e-14 | 53.1 | 1.1e-09 | 1.8e-06 | 26.8 |
| pfu_aug2.0_231.1_03840.t1 | 2 | 1 | NAD_binding_4 | 12 | 87 | 4.0e-08 | 32.5 | 2.9e-06 | 0.0048 | 15.8 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 2 | Epimerase | 145 | 244 | 3.2e-16 | 59.4 | 2.5e-06 | 0.0041 | 16.5 |
| pfu_aug2.0_231.1_03840.t1 | 2 | 2 | NAD_binding_4 | 145 | 248 | 4.0e-08 | 32.5 | 1.0e-05 | 0.017 | 14.0 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 2 | adh_short | 145 | 181 | 6.5e-07 | 29.4 | 0.011 | 18.0 | 5.2 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 2 | KR | 145 | 180 | 6.6e-06 | 25.9 | 0.0019 | 3.1 | 7.4 |
| pfu_aug2.0_231.1_03840.t1 | 2 | 2 | 3Beta_HSD | 147 | 218 | 1.8e-14 | 53.1 | 8.7e-09 | 1.4e-05 | 23.9 |
| pfu_aug2.0_231.1_03840.t1 | 2 | 2 | NmrA | 328 | 371 | 9.9e-09 | 34.7 | 0.51 | 840.0 | -1.0 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 3 | Epimerase | 331 | 351 | 3.2e-16 | 59.4 | 0.099 | 160.0 | 1.5 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 3 | adh_short | 345 | 379 | 6.5e-07 | 29.4 | 2.3 | 3700.0 | -2.4 |
| pfu_aug2.0_231.1_03840.t1 | 3 | 3 | KR | 349 | 382 | 6.6e-06 | 25.9 | 2.5 | 4100.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_231.1_03840.t1 | gi|676427121|ref|XP_009044844.1| | hypothetical protein LOTGIDRAFT_136119 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_231.1_03840.t1 | gi|676468162|ref|XP_009058120.1| | hypothetical protein LOTGIDRAFT_153873 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_231.1_03840.t1 | gi|195997929|ref|XP_002108833.1| | hypothetical protein TRIADDRAFT_19972 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_231.1_03840.t1 | gi|196014179|ref|XP_002116949.1| | hypothetical protein TRIADDRAFT_50972 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_231.1_03840.t1 | gi|585707111|ref|XP_006823926.1| | PREDICTED: cinnamoyl-CoA reductase 2-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_231.1_03840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03840.t1 atggcagaagcgaatgaatcaaatttggtgctagtgacaggggcttctggttacatcgcctcccacatagtcaagcagtt acaggatcaaggttatcaggtcaggggcacagtccgtagccttggtgacgaggaacaggtcaaacgtctgaatgaactca gtcccgaggcccagtttaagttagagctagtggaggcagacctgaccaaacccgagtcatgggaaccggcggtaaaggat gtgcgttacgtcattcacgtggtgagtccattaacggcacaggcgccaaaggatgatnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgaagtggtacagcccacagtggaggggacacaggctgttctgaaa gcttgtgtgtcagccaagtctgtcaaaagagtggtgttgacaagctcatgtgtggcggttggatggggccctggtgcaga cctgaccaaaacattcacagaggaagactggacggatccagaaaaactggatgctcaagcaaagagcaaaactctcgctg aaaaggcagcatgggactatgttaaggaattaccagatgaagataagatagaattagccgttgttaacccagcgtacgta atgggaccagtcattaatgggtcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgtaaaagtctagaggttgtgaagcgtttactggagagggagaaacca tttgtcgcacgtttaaatttccccgttgctgatgttcgggatgttgctgaggctaatattaaagctatgacaatggatga agctgctggcaaacgtcacttgatctgttcatcaaacatgtggatgaaagacatggcccagattttggcaaaggaattca aatcgcaaggttacaacatccccacatcaaattgccccaatgttttgctgaagtttatcggtatattcgacaagacagtg aaagtagtacaaccaaacttagacaaggtctacaaatttgacacgtcaagaatgaaggatgtgttacaattaacaccaaa ggaagtcaaagaaactctgattgacatggcatacagtttaatcgagagcggactggtcaagaagtctaagaaatataagg gacccaatgccggcggagagggagaaggtgaacaggaaggagagaagaaagaagaggagaaagaggaggaaaaagccaaa gaaaatggagaagtgacggaaggaaagaaagaggaagatggagatgtgaaaaaggaggaagaaaaagaagagaagacaga aaccgaggaatccaaggaggaaaagaaagaagaaacaaaagaagaaacaaaggaggaagtatcagaagagaaaactgaag agaagaaggaggaagagaagaaggaggagaaatag |
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Protein
| Protein ID | pfu_aug2.0_231.1_03840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03840.t1 MAEANESNLVLVTGASGYIASHIVKQLQDQGYQVRGTVRSLGDEEQVKRLNELSPEAQFKLELVEADLTKPESWEPAVKD VRYVIHVVSPLTAQAPKDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVVQPTVEGTQAVLK ACVSAKSVKRVVLTSSCVAVGWGPGADLTKTFTEEDWTDPEKLDAQAKSKTLAEKAAWDYVKELPDEDKIELAVVNPAYV MGPVINGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSLEVVKRLLEREKP FVARLNFPVADVRDVAEANIKAMTMDEAAGKRHLICSSNMWMKDMAQILAKEFKSQGYNIPTSNCPNVLLKFIGIFDKTV KVVQPNLDKVYKFDTSRMKDVLQLTPKEVKETLIDMAYSLIESGLVKKSKKYKGPNAGGEGEGEQEGEKKEEEKEEEKAK ENGEVTEGKKEEDGDVKKEEEKEEKTETEESKEEKKEETKEETKEEVSEEKTEEKKEEEKKEEK |
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