Gene
| Gene Model ID | pfu_aug2.0_231.1_03842 |
|---|---|
| Locus | scaffold231.1 : 182166 ... 214020 : + |
| To GenomeBrowser | scaffold231.1:182166..214020 |
| Genes list of scaffold | scaffold231.1 |
| Synonym | pfu_aug1.0_13916.1_32367 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_231.1_03842.t3 | 1 | 1 | WD40 | 522 | 550 | 1.6e-06 | 27.7 | 3.6e-10 | 5.3e-06 | 26.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_231.1_03842.t3 | gi|749774716|ref|XP_011142580.1| | PREDICTED: WD repeat-containing protein 44 isoform X1 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_231.1_03842.t3 | gi|749774719|ref|XP_011142581.1| | PREDICTED: WD repeat-containing protein 44 isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_231.1_03842.t3 | gi|383859736|ref|XP_003705348.1| | PREDICTED: WD repeat-containing protein 44 isoform X3 [Megachile rotundata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_231.1_03842.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03842.t1 atgtggaacgaagcctccaattcatcaagtcttataacaacggcaaacttttgtcataatgggaaatttgctgtggcagg cacttatgacgggaaatgtatattttacactactgagcaactgaagtactatacacaaatccatgttaaatccactcgag ggaagaattccaaaggcagcaaaattacagggatcgagccattaccaggggaagataagatacttgtgacctcaaatgac tcaaggataagactgtatgacctccgtgatttgaccttgacctgtaaatacaaaggatgtaccaataatagcagtcaaat caaggccagttttagccccaagagtaaatacattatatgtggctcagaagaccattttatctatatctggaagacacagc atgattattataaattttcctcggcacgacgagacaggaatgattactgggaggccattaaagttcacaatgccaccgtg accgcagcagtttttgcaccaaatccagcgctgctgaaaaaatctgacttctgtgaggcagcagagtcctctagtgacaa acatgaaaaccaagagcagataattgtgtctgccgactttagcggagctattaaagttgttcagaatcgagcagtgggaa ccaattag |
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| Transcript ID | pfu_aug2.0_231.1_03842.t2 |
| Definition | - |
>pfu_aug2.0_231.1_03842.t2 atgagacaaagaatgtcagataacactatggactcaccagattacgagtctgacacgagtgaagaaagcgaaagtcagga aacgcagagtcaagaacttgactccgacacgtcaaatgaaaatgtcgagaataacgatgatccacaattagacagtgtta caaagagattgacattttctgaaaatatgaattcgtcacatcccgataaacaacatttgcaaaaagaaattccaatacta gtgacagaatcgtttgacgataataatccagaatcgggcgatattgtcgaggaggtcataaaagaaacaaaggcatgtga cgattttgatataaacgaacctgacattgttagaagcacaaaaacacgaactcctccaaacatgatgctccctgtcgaca catattcctctaagtcactagagttacctccccctggcacagtaataccacccgactcacttgcattaccaaaggcccct cccaggcgaagaaagaaaggagacagaaacagtgatgatctatcaagtgagtccagttcgttagactacaagaaggctcc caagggtctgtccccttcttcaccagcaggatccctggggaggggaccaggagaaaactccctagatctcaggagctgtc tgggaggcaggcgacatattaatgctgaggaggcagagaagaatgccgttaattctgactacgattcacctgtacacaga attactcgtaactcctcatccctggggagggaggaacggaaaaacacagacaaggaggaaactcctcgtaaatcctccag tctgcctagaaagtcctccagtgtatcaaggaagtcctcagagagggagtgtaggaagtccatagataaagatggcgctt ctggtgataaatcttccaatcaggaactctctgctggagtcacgttaccaagaccaaggtcaaattcagggagactgcta acagatgaggaaattttagagtctgttctagtgctgaatctggatacgggagaaaaagtcccgctgagtgttgcggaaga caaaatccctcagggtatgaaccccctggcattacatatcatgaggctgacgaaagaataccacagaatgaagttaaaga agttcttaggaaagaaagtcaagaagaatgtggacaaactcaaaaatgctgcggaccaagttctatatggtgacgaggaa ggtgttgaagaggaggttactgtggatggaaagatttttaagattaaagcccatcacaaaggatctgctgagtttaacca gctccgtatgttacaggatatgagtggggttcacacgggagctatatggaccatgaagttttcaccatgcggacgattgc tgtccacaggtggtcaggaccacatgctcaggatctgggttctcaagtcggcatttaattactttgacgagatgcggcaa agatacgctgatgtgtcagtatccccgctccctcacatgaaagtcttattacatgagccatcagtggaggatgagaagga ttcccccttcatgccacgccccttttgtgtgtacaggggtcatgcttcagatttattagatgtttcatggtccaagaatt actttattctatcctcgtccatggataagacagttcgcctttggcacatatcacgtaaagagtgcctgtgtatattccag cacatagactttgttacagctatagtgtttcatcctaaggatgatagatattttctgagtgggtctcttgatgggaagct gagattatggaacatacctgagaaaaaagtgaccatgtggaatgaagcctctaattcatcaagtctcataacaactgcaa acttttgtcataacgggaaatttgctgtggcaggcacttacgatgggaaatgtatattttacactactgagcaactgaag tactatacacaaatccatgttaaatccactcgagggaagaattccaaaggcagcaaaattacagggatcgagccattacc aggggaagataagaattactttattctgtcttcgtctatggataagacagttcgcctttggcacatatcacgtaaagagt gcctgtgtatattccagcacatagactttgttacagctatagtctttcatcctaaggatgatagatattttctgagtggg tctcttgatgggaagctgagattatggaacatacccgagaaaaaagtgaccatgtggaacgaagcctccaattcatcaag tcttataacaacggcaaacttttgtcataatgggaaatttgctgtggcaggcacttatgacgggaaatgtatattttaca ctactgagcaactgaagtactatacacaaatccatgttaaatccactcgagggaagaattccaaaggcagcaaaattaca gggatcgagccattaccaggggaagataagatacttgtgacctcaaatgactcaaggataagactgtatgacctccgtga tttgaccttgacctgtaaatacaaaggatgtaccaataatagcagtcaaatcaaggccagttttagccccaagagtaaat acattatatgtggctcagaagaccattttatctatatctggaagacacagcatgattattataaattttcctcggcacga cgagacaggaatgattactgggaggccattaaagttcacaatgccaccgtgaccgcagcagtttttgcaccaaatccagc gctgctgaaaaaatctgacttctgtgaggcagcagagtcctctagtgacaaacatgaaaaccaagagcagataattgtgt ctgccgactttagcggagctattaaagttgttcagaatcgagcagtgggaaccaattag |
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| Transcript ID | pfu_aug2.0_231.1_03842.t3 |
| Definition | - |
>pfu_aug2.0_231.1_03842.t3 atgatttatcattatacatgtagaactaccctccaaaatatatctgaggagaaggatgctcttgacagtctggacagaga cgaacaaaaactgctacagctccgtgtagagcaggaggagaggaggaggcaagaggatgaagagtatcaagccaggttaa tagagttggagaggaagagaagagagaaggaagagaaggaggcacgaaagaaaatccgagaaaatgagaaaagaaaaaga aagctgttagaaatgagacaaagaatgtcagataacactatggactcaccagattacgagtctgacacgagtgaagaaag cgaaagtcaggaaacgcagagtcaagaacttgactccgacacgtcaaatgaaaatgtcgagaataacgatgatccacaat tagacagtgttacaaagagattgacattttctgaaaatatgaattcgtcacatcccgataaacaacatttgcaaaaagaa attccaatactagtgacagaatcgtttgacgataataatccagaatcgggcgatattgtcgaggaggtcataaaagaaac aaaggcatgtgacgattttgatataaacgaacctgacattgttagaagcacaaaaacacgaactcctccaaacatgatgc tccctgtcgacacatattcctctaagtcactagagttacctccccctggcacagtaataccacccgactcacttgcatta ccaaaggcccctcccaggcgaagaaagaaaggagacagaaacagtgatgatctatcaagtgagtccagttcgttagacta caagaaggctcccaagggtctgtccccttcttcaccagcaggatccctggggaggggaccaggagaaaactccctagatc tcaggagctgtctgggaggcaggcgacatattaatgctgaggaggcagagaagaatgccgttaattctgactacgattca cctgtacacagaattactcgtaactcctcatccctggggagggaggaacggaaaaacacagacaaggaggaaactcctcg taaatcctccagtctgcctagaaagtcctccagtgtatcaaggaagtcctcagagagggagtgtaggaagtccatagata aagatggcgcttctggtgataaatcttccaatcaggaactctctgctggagtcacgttaccaagaccaaggtcaaattca gggagactgctaacagatgaggaaattttagagtctgttctagtgctgaatctggatacgggagaaaaagtcccgctgag tgttgcggaagacaaaatccctcagggtatgaaccccctggcattacatatcatgaggctgacgaaagaataccacagaa tgaagttaaagaagttcttaggaaagaaagtcaagaagaatgtggacaaactcaaaaatgctgcggaccaagttctatat ggtgacgaggaaggtgttgaagaggaggttactgtggatggaaagatttttaagattaaagcccatcacaaaggatctgc tgagtttaaccagctccgtatgttacaggatatgagtggggttcacacgggagctatatggaccatgaagttttcaccat gcggacgattgctgtccacaggtggtcaggaccacatgctcaggatctgggttctcaagtcggcatttaattactttgac gagatgcggcaaagatacgctgatgtgtcagtatccccgctccctcacatgaaagtcttattacatgagccatcagtgga ggatgagaaggattcccccttcatgccacgccccttttgtgtgtacaggggtcatgcttcagatttattagatgtttcat gaattactttattctatcctcgtccatggataagacagttcgcctttggcacatatcacgtaaagagtgcctgtgtatat tccagcacatag |
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Protein
| Protein ID | pfu_aug2.0_231.1_03842.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03842.t1 MWNEASNSSSLITTANFCHNGKFAVAGTYDGKCIFYTTEQLKYYTQIHVKSTRGKNSKGSKITGIEPLPGEDKILVTSND SRIRLYDLRDLTLTCKYKGCTNNSSQIKASFSPKSKYIICGSEDHFIYIWKTQHDYYKFSSARRDRNDYWEAIKVHNATV TAAVFAPNPALLKKSDFCEAAESSSDKHENQEQIIVSADFSGAIKVVQNRAVGTN |
|
| Protein ID | pfu_aug2.0_231.1_03842.t2 |
| Definition | - |
>pfu_aug2.0_231.1_03842.t2 MRQRMSDNTMDSPDYESDTSEESESQETQSQELDSDTSNENVENNDDPQLDSVTKRLTFSENMNSSHPDKQHLQKEIPIL VTESFDDNNPESGDIVEEVIKETKACDDFDINEPDIVRSTKTRTPPNMMLPVDTYSSKSLELPPPGTVIPPDSLALPKAP PRRRKKGDRNSDDLSSESSSLDYKKAPKGLSPSSPAGSLGRGPGENSLDLRSCLGGRRHINAEEAEKNAVNSDYDSPVHR ITRNSSSLGREERKNTDKEETPRKSSSLPRKSSSVSRKSSERECRKSIDKDGASGDKSSNQELSAGVTLPRPRSNSGRLL TDEEILESVLVLNLDTGEKVPLSVAEDKIPQGMNPLALHIMRLTKEYHRMKLKKFLGKKVKKNVDKLKNAADQVLYGDEE GVEEEVTVDGKIFKIKAHHKGSAEFNQLRMLQDMSGVHTGAIWTMKFSPCGRLLSTGGQDHMLRIWVLKSAFNYFDEMRQ RYADVSVSPLPHMKVLLHEPSVEDEKDSPFMPRPFCVYRGHASDLLDVSWSKNYFILSSSMDKTVRLWHISRKECLCIFQ HIDFVTAIVFHPKDDRYFLSGSLDGKLRLWNIPEKKVTMWNEASNSSSLITTANFCHNGKFAVAGTYDGKCIFYTTEQLK YYTQIHVKSTRGKNSKGSKITGIEPLPGEDKNYFILSSSMDKTVRLWHISRKECLCIFQHIDFVTAIVFHPKDDRYFLSG SLDGKLRLWNIPEKKVTMWNEASNSSSLITTANFCHNGKFAVAGTYDGKCIFYTTEQLKYYTQIHVKSTRGKNSKGSKIT GIEPLPGEDKILVTSNDSRIRLYDLRDLTLTCKYKGCTNNSSQIKASFSPKSKYIICGSEDHFIYIWKTQHDYYKFSSAR RDRNDYWEAIKVHNATVTAAVFAPNPALLKKSDFCEAAESSSDKHENQEQIIVSADFSGAIKVVQNRAVGTN |
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| Protein ID | pfu_aug2.0_231.1_03842.t3 |
| Definition | - |
>pfu_aug2.0_231.1_03842.t3 MIYHYTCRTTLQNISEEKDALDSLDRDEQKLLQLRVEQEERRRQEDEEYQARLIELERKRREKEEKEARKKIRENEKRKR KLLEMRQRMSDNTMDSPDYESDTSEESESQETQSQELDSDTSNENVENNDDPQLDSVTKRLTFSENMNSSHPDKQHLQKE IPILVTESFDDNNPESGDIVEEVIKETKACDDFDINEPDIVRSTKTRTPPNMMLPVDTYSSKSLELPPPGTVIPPDSLAL PKAPPRRRKKGDRNSDDLSSESSSLDYKKAPKGLSPSSPAGSLGRGPGENSLDLRSCLGGRRHINAEEAEKNAVNSDYDS PVHRITRNSSSLGREERKNTDKEETPRKSSSLPRKSSSVSRKSSERECRKSIDKDGASGDKSSNQELSAGVTLPRPRSNS GRLLTDEEILESVLVLNLDTGEKVPLSVAEDKIPQGMNPLALHIMRLTKEYHRMKLKKFLGKKVKKNVDKLKNAADQVLY GDEEGVEEEVTVDGKIFKIKAHHKGSAEFNQLRMLQDMSGVHTGAIWTMKFSPCGRLLSTGGQDHMLRIWVLKSAFNYFD EMRQRYADVSVSPLPHMKVLLHEPSVEDEKDSPFMPRPFCVYRGHASDLLDVSXITLFYPRPWIRQFAFGTYHVKSACVY SST |
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