Gene
| Gene Model ID | pfu_aug2.0_231.1_03843 |
|---|---|
| Locus | scaffold231.1 : 214028 ... 235115 : - |
| To GenomeBrowser | scaffold231.1:214028..235115 |
| Genes list of scaffold | scaffold231.1 |
| Synonym | pfu_aug1.0_8789.1_60503 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| grip and coiled-coil domain-containing protein 2 | GO:0016482 GO:0034613 GO:1902582 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_231.1_03843.t1 | 12 | 1 | AAA_13 | 2 | 106 | 6.2e-06 | 24.9 | 0.73 | 1400.0 | -2.6 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 1 | CENP-F_leu_zip | 3 | 64 | 5.1e-11 | 42.5 | 0.084 | 160.0 | 2.1 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 2 | CENP-F_leu_zip | 69 | 179 | 5.1e-11 | 42.5 | 8.0 | 15000.0 | -11.9 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 2 | AAA_13 | 106 | 333 | 6.2e-06 | 24.9 | 3.6 | 6700.0 | -4.9 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 3 | CENP-F_leu_zip | 201 | 252 | 5.1e-11 | 42.5 | 0.012 | 22.0 | 4.9 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 4 | CENP-F_leu_zip | 293 | 408 | 5.1e-11 | 42.5 | 0.008 | 15.0 | 5.4 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 3 | AAA_13 | 293 | 502 | 6.2e-06 | 24.9 | 8.0 | 15000.0 | -11.4 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 4 | AAA_13 | 396 | 582 | 6.2e-06 | 24.9 | 0.43 | 800.0 | -1.9 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 5 | CENP-F_leu_zip | 413 | 513 | 5.1e-11 | 42.5 | 0.00015 | 0.27 | 11.0 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 6 | CENP-F_leu_zip | 511 | 555 | 5.1e-11 | 42.5 | 0.069 | 130.0 | 2.4 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 7 | CENP-F_leu_zip | 554 | 687 | 5.1e-11 | 42.5 | 2.8e-12 | 5.3e-09 | 36.0 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 5 | AAA_13 | 612 | 781 | 6.2e-06 | 24.9 | 0.011 | 21.0 | 3.4 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 8 | CENP-F_leu_zip | 679 | 815 | 5.1e-11 | 42.5 | 0.076 | 140.0 | 2.2 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 6 | AAA_13 | 766 | 981 | 6.2e-06 | 24.9 | 3.3e-09 | 6.2e-06 | 24.9 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 9 | CENP-F_leu_zip | 820 | 934 | 5.1e-11 | 42.5 | 4.7e-05 | 0.087 | 12.6 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 10 | CENP-F_leu_zip | 923 | 1055 | 5.1e-11 | 42.5 | 2.8e-05 | 0.052 | 13.4 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 7 | AAA_13 | 986 | 1160 | 6.2e-06 | 24.9 | 1.3e-05 | 0.023 | 13.1 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 11 | CENP-F_leu_zip | 1044 | 1190 | 5.1e-11 | 42.5 | 0.00032 | 0.6 | 9.9 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 8 | AAA_13 | 1169 | 1274 | 6.2e-06 | 24.9 | 0.052 | 96.0 | 1.2 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 12 | CENP-F_leu_zip | 1211 | 1360 | 5.1e-11 | 42.5 | 0.00026 | 0.49 | 10.2 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 9 | AAA_13 | 1274 | 1455 | 6.2e-06 | 24.9 | 0.038 | 71.0 | 1.6 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 13 | CENP-F_leu_zip | 1347 | 1476 | 5.1e-11 | 42.5 | 0.034 | 63.0 | 3.4 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 10 | AAA_13 | 1449 | 1635 | 6.2e-06 | 24.9 | 0.00047 | 0.88 | 7.9 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 14 | CENP-F_leu_zip | 1492 | 1525 | 5.1e-11 | 42.5 | 0.015 | 27.0 | 4.5 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 15 | CENP-F_leu_zip | 1533 | 1664 | 5.1e-11 | 42.5 | 5.5e-05 | 0.1 | 12.4 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 16 | CENP-F_leu_zip | 1620 | 1714 | 5.1e-11 | 42.5 | 0.1 | 190.0 | 1.8 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 11 | AAA_13 | 1673 | 1812 | 6.2e-06 | 24.9 | 0.015 | 28.0 | 3.0 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 17 | CENP-F_leu_zip | 1722 | 1811 | 5.1e-11 | 42.5 | 0.004 | 7.4 | 6.4 |
| pfu_aug2.0_231.1_03843.t1 | 2 | 1 | GRIP | 1785 | 1803 | 1.9e-17 | 62.4 | 3.2 | 5900.0 | -3.2 |
| pfu_aug2.0_231.1_03843.t1 | 18 | 18 | CENP-F_leu_zip | 1886 | 1943 | 5.1e-11 | 42.5 | 0.32 | 590.0 | 0.2 |
| pfu_aug2.0_231.1_03843.t1 | 12 | 12 | AAA_13 | 1886 | 1944 | 6.2e-06 | 24.9 | 0.0021 | 3.9 | 5.8 |
| pfu_aug2.0_231.1_03843.t1 | 2 | 2 | GRIP | 1942 | 1986 | 1.9e-17 | 62.4 | 4.9e-20 | 9.0e-17 | 60.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_231.1_03843.t1 | gi|524868205|ref|XP_005090907.1| | PREDICTED: golgin subfamily B member 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_231.1_03843.t1 | gi|675626715|ref|XP_008941704.1| | PREDICTED: GRIP and coiled-coil domain-containing protein 2 [Merops nubicus] | 0.0 |
| pfu_aug2.0_231.1_03843.t1 | gi|675719366|ref|XP_002757532.2| | PREDICTED: GRIP and coiled-coil domain-containing protein 2 [Callithrix jacchus] | 0.0 |
| pfu_aug2.0_231.1_03843.t1 | gi|514715217|ref|XP_005012500.1| | PREDICTED: GRIP and coiled-coil domain-containing protein 2 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_231.1_03843.t1 | gi|511889353|ref|XP_004764405.1| | PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform X1 [Mustela putorius furo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_231.1_03843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03843.t1 atggaagaggaactaaagcattttcaatcagagcttcaacagtctagaaatagcatagcacaattagaagaacaagcatc aatcactgaagagaaattcaaattaaaagaagcagaattacgggaaactatggaatcggagtttaaacatgagagagagg agatgatagaaaaattcaaagaagaaagagaggagcatcgaagggatattgaattgatgaaagcatcgcaagaaagtttt cagaaagattttgcatccagtagtctatccatgcagcagttaattgaagaaaaacaaaaattgattgagcagaagaagga agtagcagatgagaatcagcaactaaaggaagctatggagaagcagacaacagaactgatttcattgaaacaggaaatgg gtaaagaaagtgaagttgaagataaggaaaaggatgttggttcagaaaagaaagttcttgaggacaaaatacaggattat gaaagaagaattagtgctctgaaagaggaacttgaatccaaaagtgagggacttcttgctgctagaaaggagatagattc cttacattccaaactcacatcttctttggaagaatcaattaaaacaaagtcattgttagagagtgagcagaattttaagt cagatttgcaaaatgagattgacaatttgacattccaactacatgaactgacagaaaatgaaaatgaactgaaggcgtca aatgaaaatttaaaagccaagtgtctagaactggagtttgcatcaccagtgaaacctacgcaaggtgcaaaagggaacgg aaggggaaatggtgccgcaaagggaaatgtcagtccccgtgcaaatggaacgacagcaaaaacaatagatcctaaaaaga agatccaaactcttacgagggaaaaagaaattttggaacagaaagtagagaaggcaaatagagagcatgagaatcttact taccaaatcagtgaagtccaggaagagaaggaaatcatgcgtaacgagatgtcactgatgaaagagcagatggatgaatg ggaacatatgatgaatatgttaaaggcagataattatagaatgtcacaagaactcgatgagttggactcacgtgagaaga aagtgctgggtgacattgaattgtttcaaggacttttgggaataacgaaaaaagaagaaaagaaggaggaagctgaagaa gatgatgagaaagaagatgataatgaagatgtatttgaatcttcaccggatcaggaatcggcggtgaagcaacttgaaga ggtcagacactgtgtccagaaactgttagaagacaaggagaagttgaaggtagaactggatgatgtttatgctaagaaag gggatagttctattgagatacagagtgtaaagagagagatgcagaaggtacaggaggaaaaagacggcttggagagagaa aaagaatcggtgaatgtaatgctacatttagctgaagatcagcgtgaacatcttaaagaagaaaacgatagtttgaagga aatgattagagggaaggaggaggaagttgcaaatgtaacaattcagcttcaagccgctaataacaaaattgaaaatttgg atgagactatagaaaagattacagtggaaactcgggagctgaaagaaaatgttgtaagtttggaagagaaggtcaaggaa agacaatcctacactgaggagctggagaataggattctcgagatgtcaaacaacctggcggaaacaaaaagcaaacatga acagtttatcgcaaaattggaaacagatggtgaatctgcaaattctatgcttcaaacagaaattgaggaattgagaacaa gtcgtaatgagctcgaggcagagttgagcaaagtgaaggaaatgaactcagaaatagatgcagctaaaaggttgttggag gaaaaagtatcaacatttgaaaatgagcttaaatcaaaagaagatgttatttctatgttggagagtgataaaggaaaagt ttcagaggaagcatcttcgaagtgttttcagttagagtcgaaactgaaagaaatgtcagaaaaacatgaagaatcggtca aaactgcaaaggagttgcagactttggttgaaactttagaagcagaatcaaaacaaaaggatgaaaagattgcatcagca gaaaaagagagaagtgaaggggttcagcaaactcggggtttacaaagtgatatggagaaactagagcagatgtgtcagaa tttgaagacggaatgtgagggtctaaaacaggagaaggaggaatcatcatcacaacttactgaacaaactgtgcaaatta cggaactaagacagtcgatagaagaaaaggacgaaaaagaaaccatgcttttaaaagaaatggaggatttgaaaagtgcg gttcagagctgtaaagatgaagtagaaaagacacggttggaacttgaggataaaaattctcagatagaagcgttgaaaca agaacttgattccaagagtgaagatttacatcagtctggcagtgaaatggccaatgtgaaggaggagactgatagagtac aaagagaggctgataagtgggaaaaacagtgtgaagaactgacggcaaaaatacaggaactgtgtacggagaaagaggag ctattatcaaaatgtacaagtatggaaagtcagcttagtgctttgaaggaagaaaatgaatctagtgtaaataatgtgat agaaaaacttcatgaggaattgcgtgaaaaagatgcaacgtgcaaaagtcaggaggaaaagttacaaacaatgtcggagg aaaattttgatttttctaaacaggttgacagtttgtcttcagaaatatcagagttaaagaaagaactagaggatgtgaag gtggagaattcaaacctgaaggaacaattgtcaatgcttactaccaaagttggtgacttgaaagttgaaaaggaaacatt agttgctcaaaattctgaattaaaagctcaactagactccctggttcctcaaaaggaagagctagagtcacgcttagaaa gtattcaaaatgaaaactctgaattaaagacccagttggatcgtgttcaaagagattttgaagctgcaaaccaggaaagt gaatcaaatcaaaaccaggaaatagcagatctgaaatcagaactaacgaggaaggaagacttaattaaggatagtgacga taaaattgacacgcttagctctgaattagactctgtgaaagagcagtgtgatgatctgaacaataaactgggagatatgg agaaaaataaagaaatcttactcaaccagatggaagaaatggagaaacagctagtacaagaaaagtgtcagcttgagaca actctgagcgaaaaggaggagatgataagtgaattgagtcagaggttagaagatatggatagccaagtaagggagttggc acagcaaaatgaggatctcttgaaacaagttggtgatcttaagggcaaagaaactgaaactctacagaaatcagaggaca ctcaaggaaaggttgccgggttagaagggcaaattcaacagaaagaagaaatgattacaaaacttaaatccttagccatg aagagtaagaaggaactagcagcgttaaaaacaaagcacgatgaaactttatcagagctgacagctgtcaagacggcaaa cacagaactacagcaaaatgtacagctgatggaacagtcacagaaatctgactccgaacaactacaaagctttaaggcat tgcaagaagaacacagctccactcaagctaaactagctgctaaagcaaaagaggcagaggaaattcaggctgatctgaac agactcataacagagatggcgtctgtcaaagagagtgtggcaatggcgaacgaagagagagatagataccgaaaagaaag tgaaaatattaaaacagaaattaagaagttagagagtaccgtgtcagagatgaagtcatcagtgaagaccaatgaacagg agaaagaagccaacagaatacagagagaccaagtcatcaaagagaaaacacagctacagacagaaatatccgaactgaag gacaagatgaagtcatcagaggacagacagaaggacgtagtgacaggattacaaaatcagatcaaagacatacagacaca actagaaaaagctaaacaggaagctaagcagagttctatgatggatttggagatagctgattatgagaggaccatggagg ctctcaatgctcaactagccgctaaagacgggaacataacggaactcaaacaggagattgacaggctggaagaaaataac aagtctcttaaagatcaactgaattccgtggaggagttacgaagccaggctgaggagagaggaaacaaaatcaaacagat gttggtcaaaaccaagaaggaacttactgacgcaaagaaaatggaggtagaacagaggacttctgatgcccagagacagg gacaaatagaacatctaaatcaacaactggaagagtataagatgcagatagcagatgtttcaggagagaaacagaaactt caagaaaaactccactccttctctgactctaatacaagaacagttaaatccctagagaatcgcgtacaggctctacagga tgaccttgacctgtcaaagagtgaactgatggctgtgcaggccgagtatgaaggttataaggaggtagaacagaggactt ctgatgcccagagacagggtcaaatagaacatctcaatcaacaactggaagagtataagatgcaaatagcagaggtttca ggagagaaacagaagcttcaagaaaaactccactccttctctgactctaatacaagaacagttaaatccttggagaatcg cgtacaggctctacaggatgaccttgacctgtcaaagagtgaactgatggctgtacaggccgagtatgaaggttataagg ttcgagtacacagtgtattgaaacagcaaaagaaaggttctcctgatgttgttaatgaaggagagaagatggaaagagaa agattagaaaaggctatagaacaacttaaatctaagctgcaagatgtcagcgaaaagttgtcgtctgctgagcaggataa tgagatgcagatggaggagcacagtcgtctgctgacacggtacaataaactactacaggatgtacaagagagggaaaatg gacttaaacgaaggatcgaagaattgaccaatgagaagtcggtctacatgaaagagcaacaagagatgattaaacaactg aacaaacaaaatgagaacatttcatccactctgaaggaacaaatgcggacactaaaggaggatcaccaccgagcgttggg agtcctacaacgtcagttagacatgtccgataacgaggtcatgaggctccaacaggaggtacgacagctacaacattccc caagacctgtcgtacgagagcagatcctaccagtgtcggcagccgtaaccgaatacgtacctgacataagacatgaagaa agacaggaaggggagggatcagagatcgtagatccagaacctctggtggtgggtcatagtaaggcagtgggaccaatacc cctggatcaactactaacaacaggggcagaggagagagtggtgagggaccaaggtttagagatggagacaatgagagaga atctagatacagccaataagagaatagagcatttaacagagctttctagtgagaacgaagccacagtaatgagattaacc gagcaagctaagatactgaaggaggagatccgacggttagagaggaatcaggaacgggaaaaggaggcggctaatatgga ataccttaaaaatatactccttaagtttctgagtcttaaagccggagatgaacgtcaacaattagtaccagtattaacca caatgttaaaacttagtcctgatgagaaaggaaaaatagaagcagtagctcaaggtgatgctgtaggagaaaatcagcag gcacagcaaggagggtgggggtcttacttacatcggtgaaatgtaatacattcttacggagactttactggncgacgacg ccgagggtatggcattagctctccggactttttcgtcccggcgagctaa |
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Protein
| Protein ID | pfu_aug2.0_231.1_03843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03843.t1 MEEELKHFQSELQQSRNSIAQLEEQASITEEKFKLKEAELRETMESEFKHEREEMIEKFKEEREEHRRDIELMKASQESF QKDFASSSLSMQQLIEEKQKLIEQKKEVADENQQLKEAMEKQTTELISLKQEMGKESEVEDKEKDVGSEKKVLEDKIQDY ERRISALKEELESKSEGLLAARKEIDSLHSKLTSSLEESIKTKSLLESEQNFKSDLQNEIDNLTFQLHELTENENELKAS NENLKAKCLELEFASPVKPTQGAKGNGRGNGAAKGNVSPRANGTTAKTIDPKKKIQTLTREKEILEQKVEKANREHENLT YQISEVQEEKEIMRNEMSLMKEQMDEWEHMMNMLKADNYRMSQELDELDSREKKVLGDIELFQGLLGITKKEEKKEEAEE DDEKEDDNEDVFESSPDQESAVKQLEEVRHCVQKLLEDKEKLKVELDDVYAKKGDSSIEIQSVKREMQKVQEEKDGLERE KESVNVMLHLAEDQREHLKEENDSLKEMIRGKEEEVANVTIQLQAANNKIENLDETIEKITVETRELKENVVSLEEKVKE RQSYTEELENRILEMSNNLAETKSKHEQFIAKLETDGESANSMLQTEIEELRTSRNELEAELSKVKEMNSEIDAAKRLLE EKVSTFENELKSKEDVISMLESDKGKVSEEASSKCFQLESKLKEMSEKHEESVKTAKELQTLVETLEAESKQKDEKIASA EKERSEGVQQTRGLQSDMEKLEQMCQNLKTECEGLKQEKEESSSQLTEQTVQITELRQSIEEKDEKETMLLKEMEDLKSA VQSCKDEVEKTRLELEDKNSQIEALKQELDSKSEDLHQSGSEMANVKEETDRVQREADKWEKQCEELTAKIQELCTEKEE LLSKCTSMESQLSALKEENESSVNNVIEKLHEELREKDATCKSQEEKLQTMSEENFDFSKQVDSLSSEISELKKELEDVK VENSNLKEQLSMLTTKVGDLKVEKETLVAQNSELKAQLDSLVPQKEELESRLESIQNENSELKTQLDRVQRDFEAANQES ESNQNQEIADLKSELTRKEDLIKDSDDKIDTLSSELDSVKEQCDDLNNKLGDMEKNKEILLNQMEEMEKQLVQEKCQLET TLSEKEEMISELSQRLEDMDSQVRELAQQNEDLLKQVGDLKGKETETLQKSEDTQGKVAGLEGQIQQKEEMITKLKSLAM KSKKELAALKTKHDETLSELTAVKTANTELQQNVQLMEQSQKSDSEQLQSFKALQEEHSSTQAKLAAKAKEAEEIQADLN RLITEMASVKESVAMANEERDRYRKESENIKTEIKKLESTVSEMKSSVKTNEQEKEANRIQRDQVIKEKTQLQTEISELK DKMKSSEDRQKDVVTGLQNQIKDIQTQLEKAKQEAKQSSMMDLEIADYERTMEALNAQLAAKDGNITELKQEIDRLEENN KSLKDQLNSVEELRSQAEERGNKIKQMLVKTKKELTDAKKMEVEQRTSDAQRQGQIEHLNQQLEEYKMQIADVSGEKQKL QEKLHSFSDSNTRTVKSLENRVQALQDDLDLSKSELMAVQAEYEGYKEVEQRTSDAQRQGQIEHLNQQLEEYKMQIAEVS GEKQKLQEKLHSFSDSNTRTVKSLENRVQALQDDLDLSKSELMAVQAEYEGYKVRVHSVLKQQKKGSPDVVNEGEKMERE RLEKAIEQLKSKLQDVSEKLSSAEQDNEMQMEEHSRLLTRYNKLLQDVQERENGLKRRIEELTNEKSVYMKEQQEMIKQL NKQNENISSTLKEQMRTLKEDHHRALGVLQRQLDMSDNEVMRLQQEVRQLQHSPRPVVREQILPVSAAVTEYVPDIRHEE RQEGEGSEIVDPEPLVVGHSKAVGPIPLDQLLTTGAEERVVRDQGLEMETMRENLDTANKRIEHLTELSSENEATVMRLT EQAKILKEEIRRLERNQEREKEAANMEYLKNILLKFLSLKAGDERQQLVPVLTTMLKLSPDEKGKIEAVAQGDAVGENQQ AQQGGWGSYLHRXNVIHSYGDFTXRRRRGYGISSPDFFVPAS |
|