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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_231.1_03847
Locus scaffold231.1 : 263546 ... 285121 : +
To GenomeBrowser scaffold231.1:263546..285121
Genes list of scaffold scaffold231.1
Synonym pfu_aug1.0_38993.1_70293

Manual annotation
Transcript
Transcript IDpfu_aug2.0_231.1_03847.t1
Definition-
>pfu_aug2.0_231.1_03847.t1
atgatttcctggnaaagtaaagaagagtatgtgaaaaaatttgccgatcttgatgatggttatcaagctattactgaagt
gaagaacagtgaggttaacaggagtgtaggtaatagaacctctgtaaatgaggagggagaggatcctgctgattattact
gtactgctgaccttagagtgaccttaccaaaacctgatgagattacagatagaaacagtagtgaactgacgcctacaaat
ccctctgggtatgattatcctccctctccaaaatctataaatccagaaatagacggaaatgattatgcaccgtttcctgg
ccaaaaaactaacggtagtgctagatcgtcatataatgatgatcctattgatactatccctcagataccttcaaggaatt
ccaaatcttcagttcaggggtatactgaaaacattccagaaaaaccgcctcgaaagaagaaggtgtcgtcaccatcaaac
acacagaggccaagggttaataccccaccatcttcctctaataggcccaggaccaacacccctccttcttcctctagcag
gcccatgtcggacacgactccactgaaaatacctcagcttccagagaattccacaaaaaatgtttcccgagcaaagtccg
actctgactataaaataccacctaggaagagaaatgtacctcctcttacggaatatgcttatgtaacaagagatgaggtc
aagccttcaaagaaggtgccgcctcaaagacctccaaatagaccccagttacccaaaaagcaacttctgatcccccaaaa
tttgaccacaaatggagatagtttacctggacgaaattccccgtccctcgataatttccaatttaacgttggaaggtcta
aggattacagcagtgaagatgatgaggaagatgcccatgcatatgaagacgcaacaatgttacatgatatgcccccggaa
cccccgcccagaaactcacgaaaatttatgaaatccatcagcgtccatgctccattgaagaaattgccagagagagatgt
gagagagagcttagatgatatggcaacagcaaggtcaaaaaactgtatataccgtcagccatctctgggtgagcgtcaga
gagtatcccaggtggatggttctataaacgttacacccctcaaacaaagtcaagtagagatactgaaacagcagcagaaa
ctgccgggaatacagctcaatattcacgcacataacggtgctaggatagcatttgttgatataaataatgctgtatgggt
tgcagggtgggacatgcgggcgtgcccacgtctgagtgacaaactacatataggagatagagttatacagataaaccaga
ttgatgtatctaacaccataatggcccacaaagtgatcaaacactcaaatcaggacatgatggaattggtggtcaagagg
ctgcccctggctaaagtgttctctatcacaaggaccttgaataggcagccactgggcatcaaacgggaaggtggcacagc
agagatttcctacgtggatccaaacggcttggcatatggtcacggtctccagcagaagatggcaaatttagatggtagcg
gagactgccactggtggataacagaaatcaacagtcgcccaattaatctgttcttcaaggctggagagatggagccactt
cttaatccagttggtaaggatatctccttggtcgttcttccagtgccattcatcacagagttaaagaaacagatgaaaaa
gttaaaaaactacaaagatttcttagcgctttga
Transcript IDpfu_aug2.0_231.1_03847.t2
Definition-
>pfu_aug2.0_231.1_03847.t2
atgaagcagggaacacctatcctggagtattacgagaaagaagagagtgtctttaccagtcagcctctccaaacgatcga
tttatcgacatgcgagaggatcacgtacacactgggccgcaatcagaaacactggactttctgtctcttcatgcaggata
gggtgttagagctctcagctgatacaagagagcacatgttgtcatggtgcagactgatggagagatctctacatgagcat
ggtagattgaggaagcctgattctgaccatgtttacagtgatgagtaccccatgaaggcccccataaagaaaaacaggac
cccttccccaccctctacacaagcccctccccctcccctacccccggacagaagaaacactagacgcattacttcatcag
gagcacctgtaaccacggcagccactgaaacaaatccgtcatctgctgcagctgccagtgtgaagtctgcctcgtccgtt
caagtgtcgtctgcagaccaagtcagtgcatcaggctcaggtcagaggggctccatggatgaaattttctctgaccaagc
cagtgttatatacaactttagaaaatctcttgtcataccgaaaaaagggaaaacaaacctgaaggagtatgaggattctg
gtgcggcatcagctaggcccactgttgtagctgatcctgattctagtagtgacgagcctgaaactacaggggaggatgat
ttcctggnaaagagtgtaggtaatagaacctctgtaaatgaggagggagaggatcctgctgattattactgtactgctga
ccttagagtgaccttaccaaaacctgatgagattacagatagaaacagtagtgaactgacgcctacaaatccctctgggt
atgattatcctccctctccaaaatctataaatccagaaatagacggaaatgattatgcaccgtttcctggccaaaaaact
aacggtagtgctagatcgtcatataatgatgatcctattgatactatccctcagataccttcaaggaattccaaatcttc
agttcaggggtatactgaaaacattccagaaaaaccgcctcgaaagaagaaggtgtcgtcaccatcaaacacacagaggc
caagggttaataccccaccatcttcctctaataggcccaggaccaacacccctccttcttcctctagcaggcccatgtcg
gacacgactccactgaaaatacctcagcttccagagaattccacaaaaaatgtttcccgagcaaagtccgactctgacta
taaaataccacctaggaagagaaatgtacctcctcttacggaatatgcttatgtaacaagagatgaggtcaagccttcaa
agaaggtgccgcctcaaagacctccaaatagaccccagttacccaaaaagcaacttctgatcccccaaaatttgaccaca
aatggagatagtttacctggacgaaattccccgtccctcgataatttccaatttaacgttggaaggtctaaggattacag
cagtgaagatgatgaggaagatgcccatgcatatgaagacgcaacaatgttacatgatatgcccccggaacccccgccca
gaaactcacgaaaatttatgaaatccatcagcgtccatgctccattgaagaaattgccagagagagatgtgagagagagc
ttagatgatatggcaacagcaaggtcaaaaaactgtatataccgtcagccatctctgggtgagcgtcagagagtatccca
ggtggatggttctataaacgttacacccctcaaacaaagtcaagtagagatactgaaacagcagcagaaactgccgggaa
tacagctcaatattcacgcacataacggtgctaggatagcatttgttgatataaataatgctgtatgggttgcagggtgg
gacatgcgggcgtgcccacgtctgagtgacaaactacatataggagatagagttatacagataaaccagattgatgtatc
taacaccataatggcccacaaagtgatcaaacactcaaatcaggacatgatggaattggtggtcaagaggctgcccctgg
ctaaagtgttctctatcacaaggaccttgaataggcagccactgggcatcaaacgggaaggtggcacagcagagatttcc
tacgtggatccaaacggcttggcatatggtcacggtctccagcagaagatggcaaatttagatggtagcggagactgcca
ctggtggataacagaaatcaacagtcgcccaattaatctgttcttcaaggctggagagatggagccacttcttaatccag
ttggtaaggatatctccttggtcgttcttccagtgccattcatcacagagttaaagaaacagatgaaaaagttaaaaaac
tacaaagatttcttagcgctttga
Transcript IDpfu_aug2.0_231.1_03847.t3
Definition-
>pfu_aug2.0_231.1_03847.t3
atgaagcagggaacacctatcctggagtattacgagaaagaagagagtgtctttaccagtcagcctctccaaacgatcga
tttatcgacatgcgagaggatcacgtacacactgggccgcaatcagaaacactggactttctgtctcttcatgcaggata
gggtgttagagctctcagctgatacaagagagcacatgttgtcatggtgcagactgatggagagatctctacatgagcat
ggtagattgaggaagcctgattctgaccatgtttacagtgagtaccccatgaaggcccccataaagaaaaacaggacccc
ttccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggaatag

Protein
Protein IDpfu_aug2.0_231.1_03847.t1
Definition-
>pfu_aug2.0_231.1_03847.t1
MISWXSKEEYVKKFADLDDGYQAITEVKNSEVNRSVGNRTSVNEEGEDPADYYCTADLRVTLPKPDEITDRNSSELTPTN
PSGYDYPPSPKSINPEIDGNDYAPFPGQKTNGSARSSYNDDPIDTIPQIPSRNSKSSVQGYTENIPEKPPRKKKVSSPSN
TQRPRVNTPPSSSNRPRTNTPPSSSSRPMSDTTPLKIPQLPENSTKNVSRAKSDSDYKIPPRKRNVPPLTEYAYVTRDEV
KPSKKVPPQRPPNRPQLPKKQLLIPQNLTTNGDSLPGRNSPSLDNFQFNVGRSKDYSSEDDEEDAHAYEDATMLHDMPPE
PPPRNSRKFMKSISVHAPLKKLPERDVRESLDDMATARSKNCIYRQPSLGERQRVSQVDGSINVTPLKQSQVEILKQQQK
LPGIQLNIHAHNGARIAFVDINNAVWVAGWDMRACPRLSDKLHIGDRVIQINQIDVSNTIMAHKVIKHSNQDMMELVVKR
LPLAKVFSITRTLNRQPLGIKREGGTAEISYVDPNGLAYGHGLQQKMANLDGSGDCHWWITEINSRPINLFFKAGEMEPL
LNPVGKDISLVVLPVPFITELKKQMKKLKNYKDFLAL
Protein IDpfu_aug2.0_231.1_03847.t2
Definition-
>pfu_aug2.0_231.1_03847.t2
MKQGTPILEYYEKEESVFTSQPLQTIDLSTCERITYTLGRNQKHWTFCLFMQDRVLELSADTREHMLSWCRLMERSLHEH
GRLRKPDSDHVYSDEYPMKAPIKKNRTPSPPSTQAPPPPLPPDRRNTRRITSSGAPVTTAATETNPSSAAAASVKSASSV
QVSSADQVSASGSGQRGSMDEIFSDQASVIYNFRKSLVIPKKGKTNLKEYEDSGAASARPTVVADPDSSSDEPETTGEDD
FLXKSVGNRTSVNEEGEDPADYYCTADLRVTLPKPDEITDRNSSELTPTNPSGYDYPPSPKSINPEIDGNDYAPFPGQKT
NGSARSSYNDDPIDTIPQIPSRNSKSSVQGYTENIPEKPPRKKKVSSPSNTQRPRVNTPPSSSNRPRTNTPPSSSSRPMS
DTTPLKIPQLPENSTKNVSRAKSDSDYKIPPRKRNVPPLTEYAYVTRDEVKPSKKVPPQRPPNRPQLPKKQLLIPQNLTT
NGDSLPGRNSPSLDNFQFNVGRSKDYSSEDDEEDAHAYEDATMLHDMPPEPPPRNSRKFMKSISVHAPLKKLPERDVRES
LDDMATARSKNCIYRQPSLGERQRVSQVDGSINVTPLKQSQVEILKQQQKLPGIQLNIHAHNGARIAFVDINNAVWVAGW
DMRACPRLSDKLHIGDRVIQINQIDVSNTIMAHKVIKHSNQDMMELVVKRLPLAKVFSITRTLNRQPLGIKREGGTAEIS
YVDPNGLAYGHGLQQKMANLDGSGDCHWWITEINSRPINLFFKAGEMEPLLNPVGKDISLVVLPVPFITELKKQMKKLKN
YKDFLAL
Protein IDpfu_aug2.0_231.1_03847.t3
Definition-
>pfu_aug2.0_231.1_03847.t3
MKQGTPILEYYEKEESVFTSQPLQTIDLSTCERITYTLGRNQKHWTFCLFMQDRVLELSADTREHMLSWCRLMERSLHEH
GRLRKPDSDHVYSEYPMKAPIKKNRTPSXXXXXXXXXXXE

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Okinawa Institute of Science and Technology
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