Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_231.1_03850
Locus scaffold231.1 : 344468 ... 353696 : -
To GenomeBrowser scaffold231.1:344468..353696
Genes list of scaffold scaffold231.1
Synonym NA

Manual annotation
Annotation by Blast2GO
Annotation GO
uracil phosphoribosyltransferase homolog GO:0008152 GO:0016757

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_231.1_03850.t1 1 1 UPRTase 34 209 0.0 180.3 0.0 0.0 179.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_231.1_03850.t1 gi|676493255|ref|XP_009066181.1| hypothetical protein LOTGIDRAFT_133766 [Lottia gigantea] 0.0
pfu_aug2.0_231.1_03850.t1 gi|524909264|ref|XP_005109681.1| PREDICTED: uracil phosphoribosyltransferase homolog [Aplysia californica] 0.0
pfu_aug2.0_231.1_03850.t1 gi|156544105|ref|XP_001605649.1| PREDICTED: uracil phosphoribosyltransferase homolog [Nasonia vitripennis] 0.0
pfu_aug2.0_231.1_03850.t1 gi|383865225|ref|XP_003708075.1| PREDICTED: uracil phosphoribosyltransferase homolog isoform X1 [Megachile rotundata] 0.0
pfu_aug2.0_231.1_03850.t1 gi|749772016|ref|XP_011141609.1| PREDICTED: uracil phosphoribosyltransferase homolog [Harpegnathos saltator] 0.0

Transcript
Transcript IDpfu_aug2.0_231.1_03850.t1
Definition-
>pfu_aug2.0_231.1_03850.t1
atggaaccagatcttcttcaaaatacaattcaacagaatactatagaagaagtagataactatggtccaaatttcaaaaa
gctaaaaataactgataatgtcagagagttgcaaactgtcatcagagataaatcaacatcaagaggtgatttcatattct
atgcagacaggcttataagattggttgttgaggaaggtctaaatcagctaccatacagtaattgccagattaccactcct
acaggtcagacatatgatggtttgagatatgagaaagggaactgtggagtcagcatcatgagaagtggggaagccatgga
gcagggattgcgagattgttgtaggtcaattcgcatcggaaaaatcttggtacagagtgacgaggatactcacgaagcca
aagttgtatacgccaagctacctcctgacatatcctcacgtaaagtgttactgatgtaccctatcatgagtacagggaat
acagtgattaaagctgttcacattctcaaagaacacaaagtcccagaagagaacatcatcctactgaatctctttatcac
accctcagctgcaatgaccataaagaagaaatatccaaatatgactgtactaacttcagaaatccatccagtggcaccta
atcattttggacagaagtattttggtacagagtaa

Protein
Protein IDpfu_aug2.0_231.1_03850.t1
Definition-
>pfu_aug2.0_231.1_03850.t1
MEPDLLQNTIQQNTIEEVDNYGPNFKKLKITDNVRELQTVIRDKSTSRGDFIFYADRLIRLVVEEGLNQLPYSNCQITTP
TGQTYDGLRYEKGNCGVSIMRSGEAMEQGLRDCCRSIRIGKILVQSDEDTHEAKVVYAKLPPDISSRKVLLMYPIMSTGN
TVIKAVHILKEHKVPEENIILLNLFITPSAAMTIKKKYPNMTVLTSEIHPVAPNHFGQKYFGTE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495