Gene
| Gene Model ID | pfu_aug2.0_231.1_03851 |
|---|---|
| Locus | scaffold231.1 : 353867 ... 379869 : + |
| To GenomeBrowser | scaffold231.1:353867..379869 |
| Genes list of scaffold | scaffold231.1 |
| Synonym | pfu_aug1.0_10993.1_17707 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_231.1_03851.t1 | 1 | 1 | ABC_membrane | 105 | 388 | 7.1e-25 | 87.9 | 6.1e-28 | 9.1e-25 | 87.5 |
| pfu_aug2.0_231.1_03851.t1 | 1 | 1 | ABC_tran | 452 | 598 | 5.9e-31 | 107.5 | 1.2e-33 | 1.8e-30 | 106.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_231.1_03851.t1 | gi|676474445|ref|XP_009060152.1| | hypothetical protein LOTGIDRAFT_154193 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_231.1_03851.t1 | gi|524871334|ref|XP_005092440.1| | PREDICTED: ATP-binding cassette sub-family B member 7, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_231.1_03851.t1 | gi|340375491|ref|XP_003386268.1| | PREDICTED: ATP-binding cassette sub-family B member 7, mitochondrial [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_231.1_03851.t1 | gi|511921564|ref|XP_004779979.1| | PREDICTED: ATP-binding cassette sub-family B member 7, mitochondrial isoform X2 [Mustela putorius furo] | 0.0 |
| pfu_aug2.0_231.1_03851.t1 | gi|507956546|ref|XP_004685652.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_231.1_03851.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03851.t1 atgatcagattttacaggcgttcctgtccttcaagtcgcccgatactttattttaatgggacaaactgtttgttcagatc aaaaggaggaaataaaatatggagtaatgaatcaaaagattcgcgtaaatttaggacgctgttccttggaccatcacata atgcagtctctaatttagaccagaagaataaaccgaaagtaaaatcccgggggaaatatgtgacacaagaggtctctaga aaggagttgttgaaggtcttgggacagagtgtatggccaaaggacaacaagagggtcaaactttccgttttgttaactgc aggctgtctgtttgcatctaagggtttgaatatgctggtaccatttactttcaaattcatagtggatgcattgaatgatg ctaacttaacaaagactggagaaactttgctgtcactagaatgtcctaaagactgggtcttagctgctgttataggctat gctgctatgaggattggaacatcagttttccaagagtcccgaaatgctatttttagctttgtagctcagagttctatgca gaaagttgccggagatgtgttttctagcctccacagatctgataaagcctttatacatgataacagtccagcaggcctat gtgatgatattagcaggggaacaaagggtatggagactttcctgagactggttaccattaatgtaataccatcatttata gaggtctgtttagtagctggaatactgagttataaatgtggaccaacgtttgcagcagtaactgtcgggacaatctatat ctatgttcacgttacaagctctttaacaaaatggaggtctgagttttcaaaagagaggaatcgacgagacaaacagactg tggtgcaagctgctgaatcactagacaactatgatacagtcaagtactttaacaatgaggagcatgaaatacaggagtac aaaaagatatggagaaagtacatgcaagctcaacttaaaactatgagaagtttagccttgttaaacacttcccagaactt aatctacaatgttggtgtcggcattcttatgggattagctgttaatcaaattaagtctggtggtatgactgtcggagacc tggtcatggtcaatggtttactgttccagttgaatgcacagttaaactttgtaggctccacgtacagggacattaaacaa tctgatattgacatagctaacatgtttaatcttaagaagctacactctactatacagagtgcaccaggggcattaccact taatgtttcaggagagatgtccagtataaaatttgacaatgtatactttggttacgatactcagcccaatgtcttaaacg gtttaacgttcactgtaccctccggtaaaaaggcagcagtcgtaggcagcagtggatcagggaaatccaccataatcaat ttgctgtacagattttatgatccgttacaaggtggagtgtatataaatggacaaagtattaaagaggtggagataaacag cctgaggagagctattggcattgttcctcagaaaccaaagttcttcaacaagtccatcttttacaatctaagttatggag acttgaccaagtctcgagaggaggtcttagacgcagctagaaaggctcgagtccctgacattctaatgagagacttggat agggacatgggagaaaaaggagagaaagtctctttgggtcaagcccaaaggatcgccattgcccgtgtcatgctgaaaga tcctcacattattctttatgatgaggctacatcctctctggatactgtcactgagagggaaataatgtcaaatctgaagg aagctacagtaggaaaaaccaccctagtgattgcccatagactgtccacagttgtagactgtgacttaattcttgtgtta gataaaggccgaatcgtagagcagggaactcattacgaactcctctccaacccccacagtatttacacatccatgtggaa tgtccaaaataaagctgatacaagtgatacacaaacatgtactgcagactga |
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Protein
| Protein ID | pfu_aug2.0_231.1_03851.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_231.1_03851.t1 MIRFYRRSCPSSRPILYFNGTNCLFRSKGGNKIWSNESKDSRKFRTLFLGPSHNAVSNLDQKNKPKVKSRGKYVTQEVSR KELLKVLGQSVWPKDNKRVKLSVLLTAGCLFASKGLNMLVPFTFKFIVDALNDANLTKTGETLLSLECPKDWVLAAVIGY AAMRIGTSVFQESRNAIFSFVAQSSMQKVAGDVFSSLHRSDKAFIHDNSPAGLCDDISRGTKGMETFLRLVTINVIPSFI EVCLVAGILSYKCGPTFAAVTVGTIYIYVHVTSSLTKWRSEFSKERNRRDKQTVVQAAESLDNYDTVKYFNNEEHEIQEY KKIWRKYMQAQLKTMRSLALLNTSQNLIYNVGVGILMGLAVNQIKSGGMTVGDLVMVNGLLFQLNAQLNFVGSTYRDIKQ SDIDIANMFNLKKLHSTIQSAPGALPLNVSGEMSSIKFDNVYFGYDTQPNVLNGLTFTVPSGKKAAVVGSSGSGKSTIIN LLYRFYDPLQGGVYINGQSIKEVEINSLRRAIGIVPQKPKFFNKSIFYNLSYGDLTKSREEVLDAARKARVPDILMRDLD RDMGEKGEKVSLGQAQRIAIARVMLKDPHIILYDEATSSLDTVTEREIMSNLKEATVGKTTLVIAHRLSTVVDCDLILVL DKGRIVEQGTHYELLSNPHSIYTSMWNVQNKADTSDTQTCTAD |
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