Gene
| Gene Model ID | pfu_aug2.0_2321.1_05488 |
|---|---|
| Locus | scaffold2321.1 : 4616 ... 21115 : + |
| To GenomeBrowser | scaffold2321.1:4616..21115 |
| Genes list of scaffold | scaffold2321.1 |
| Synonym | pfu_aug1.0_100904.1_42398 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2321.1_05488.t1 | 2 | 1 | DegT_DnrJ_EryC1 | 63 | 209 | 4.5e-25 | 88.4 | 1.1e-27 | 7.9e-24 | 84.3 |
| pfu_aug2.0_2321.1_05488.t1 | 2 | 2 | DegT_DnrJ_EryC1 | 310 | 413 | 4.5e-25 | 88.4 | 0.011 | 84.0 | 2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2321.1_05488.t1 | gi|260820092|ref|XP_002605369.1| | hypothetical protein BRAFLDRAFT_74192 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2321.1_05488.t1 | gi|524872856|ref|XP_005093183.1| | PREDICTED: uncharacterized protein LOC101848337 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2321.1_05488.t1 | gi|291238511|ref|XP_002739173.1| | PREDICTED: uncharacterized protein LOC100367139 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2321.1_05488.t1 | gi|676445627|ref|XP_009050815.1| | hypothetical protein LOTGIDRAFT_142860, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2321.1_05488.t1 | gi|524913970|ref|XP_005111806.1| | PREDICTED: uncharacterized protein LOC101852445 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2321.1_05488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2321.1_05488.t1 atgtctctatattctgtactaccttacacttgtgtgtatatagatgctgattggaaggacatcctacgagcagctatcag atgtttgaaatgttcaaagaacagagaaaaactgttggcagatctcaaagtcatgtggtctattccagccaatcagaacc cagttcttccttgtctgtcagtgaggacaggacttgacctttatctacaggttaagagcaatcctccagggtcagaggtc ataatgtcagctataaacataccggatatggttcacatcgttagacaacatggcttgaaggtaataccctgggatataga tatagaaaggaccagtccaaagttaaaccagttagagagcctgatcagtgataagacagtagctattattgtggcacata tatatggaaaatggattgatgttgacccgattatcgatatagctcaaaagtaccagctccctgtgatagaggattgtgcc gagtgtttctgtggctttgataatattggcaatccacgatgtgatctgtcgttgttcagttttggtgtgatcaagtatta cacgtctttcggaggtgccatagccaaagtcaaagatgagagaatctacaaggctatgtgtgaactgaacacaggatatc ctatccagcaaaggagagaatatgtcaggaagcttataaaatacttcatggtttatctagtccttgactgtccaaatatt gtcaagcctgcaatgttgttaacaaggacgtttaatattgatcacaagcgcgttgtgataaaaatgctgcgaggttttcc agaccagctaatgaacaaaatcagacagcagccttccacccctcttcttcagacaatgtgggaaaggctctctaaattca gtcatgtagaatttggaacaagccaaataaagggagaatatgttagacaacgacttgcagacagtgtcactatcgtggga tctgaaacagaagttaacaactactggttgtaccctgtacttgtggaaaatcctgacaatgttgttaagatcttgaatgc gatgggtatagatgcatacagaggagcgacacagttaaacatcatagaaccagagaaatggaactgtcatttggatttct ttgctcctctgaccagtacctacccccatgaagcacgatacatgatcgaccatgttgtctacctccctgtcaataagtct gtaccattccacatactagatcatatatgtcgtgccgtcaacctggccatcaaaatgagtacaaacagacaaagtgtcaa agttagaacacaatctaagttatga |
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Protein
| Protein ID | pfu_aug2.0_2321.1_05488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2321.1_05488.t1 MSLYSVLPYTCVYIDADWKDILRAAIRCLKCSKNREKLLADLKVMWSIPANQNPVLPCLSVRTGLDLYLQVKSNPPGSEV IMSAINIPDMVHIVRQHGLKVIPWDIDIERTSPKLNQLESLISDKTVAIIVAHIYGKWIDVDPIIDIAQKYQLPVIEDCA ECFCGFDNIGNPRCDLSLFSFGVIKYYTSFGGAIAKVKDERIYKAMCELNTGYPIQQRREYVRKLIKYFMVYLVLDCPNI VKPAMLLTRTFNIDHKRVVIKMLRGFPDQLMNKIRQQPSTPLLQTMWERLSKFSHVEFGTSQIKGEYVRQRLADSVTIVG SETEVNNYWLYPVLVENPDNVVKILNAMGIDAYRGATQLNIIEPEKWNCHLDFFAPLTSTYPHEARYMIDHVVYLPVNKS VPFHILDHICRAVNLAIKMSTNRQSVKVRTQSKL |
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