Gene
| Gene Model ID | pfu_aug2.0_2325.1_18768 |
|---|---|
| Locus | scaffold2325.1 : 1 ... 2874 : + |
| To GenomeBrowser | scaffold2325.1:1..2874 |
| Genes list of scaffold | scaffold2325.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh dehydrogenase | GO:0005743 GO:0016651 GO:0055114 GO:0070469 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2325.1_18768.t1 | 1 | 1 | ETC_C1_NDUFA5 | 11 | 66 | 4.1e-15 | 55.0 | 1.6e-18 | 6.0e-15 | 54.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2325.1_18768.t1 | gi|61806484|ref|NP_001013474.1| | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 [Danio rerio] | 3.0e-35 |
| pfu_aug2.0_2325.1_18768.t1 | gi|17538940|ref|NP_501688.1| | C33A12.1 [Caenorhabditis elegans] | 2.0e-33 |
| pfu_aug2.0_2325.1_18768.t1 | gi|268551925|ref|XP_002633944.1| | Hypothetical protein CBG20020 [Caenorhabditis briggsae] | 2.0e-33 |
| pfu_aug2.0_2325.1_18768.t1 | gi|308450689|ref|XP_003088389.1| | hypothetical protein CRE_07166 [Caenorhabditis remanei] | 2.0e-33 |
| pfu_aug2.0_2325.1_18768.t1 | gi|524915787|ref|XP_005112684.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like [Aplysia californica] | 6.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_2325.1_18768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2325.1_18768.t1 acaacaggactcactggccttactgtttcccaacatcctcataaagagcttgctgatatttataggagaattctgaagac aatagtaaaaatcccccctaatgctccatataggcagaatacagaaccaattataagacaccgatgggctcttgtagaaa atattgctgatcctaataagctggaaagtgctataaatgacggccaattagaggaggtcatctctcaggcaaaaagagaa ttggaattaagcagaaagatgttagaagtaagagcatgggaacctttagttgagagtgcccctaccaaccaatggaaatg gccacctacataa |
|
Protein
| Protein ID | pfu_aug2.0_2325.1_18768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2325.1_18768.t1 TTGLTGLTVSQHPHKELADIYRRILKTIVKIPPNAPYRQNTEPIIRHRWALVENIADPNKLESAINDGQLEEVISQAKRE LELSRKMLEVRAWEPLVESAPTNQWKWPPT |
|